RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W ATH1P48016 1211 aa6.3□□□□□ -1.4
CDC6YJL194W YOL036WQ08206 761 aa6.3□□□□□ -1.4
CDC6YJL194W SPP1Q03012 353 aa6.3□□□□□ -1.4
CDC6YJL194W SPB4P25808 606 aaPredicted RBP6.29□□□□□ -1.4
CDC6YJL194W AIR2Q12476 344 aaKnown RBP6.28□□□□□ -1.4
CDC6YJL194W HGH1P48362 394 aaKnown RBP6.27□□□□□ -1.41
CDC6YJL194W SET4P42948 560 aa6.26□□□□□ -1.41
CDC6YJL194W YJL171CP46992 396 aa6.26□□□□□ -1.41
CDC6YJL194W WSC3Q12215 556 aa6.26□□□□□ -1.41
CDC6YJL194W EAP1P36041 632 aaKnown RBP6.25□□□□□ -1.41
CDC6YJL194W REF2P42073 533 aaPredicted RBP6.25□□□□□ -1.41
CDC6YJL194W ORC1P54784 914 aaPredicted RBP6.25□□□□□ -1.41
CDC6YJL194W HTA1P04911 132 aaKnown RBP6.23□□□□□ -1.41
CDC6YJL194W HTA2P04912 132 aa6.23□□□□□ -1.41
CDC6YJL194W URN1Q06525 465 aaKnown RBP6.23□□□□□ -1.41
CDC6YJL194W DCW1P36091 449 aa6.22□□□□□ -1.41
CDC6YJL194W DSF2P38213 736 aa6.22□□□□□ -1.41
CDC6YJL194W FKH1P40466 484 aa6.22□□□□□ -1.41
CDC6YJL194W YGR273CP53329 174 aa6.22□□□□□ -1.41
CDC6YJL194W YML020WQ03722 664 aa6.22□□□□□ -1.41
CDC6YJL194W MAK21Q12176 1025 aaKnown RBP6.22□□□□□ -1.41
CDC6YJL194W PBS2P08018 668 aa6.21□□□□□ -1.42
CDC6YJL194W TIF11P38912 153 aaKnown RBP6.21□□□□□ -1.42
CDC6YJL194W SOL3P38858 249 aa6.2□□□□□ -1.42
CDC6YJL194W NST1P53935 1240 aa6.19□□□□□ -1.42
CDC6YJL194W ULI1P43604 169 aa6.18□□□□□ -1.42
CDC6YJL194W TRP5P00931 707 aaKnown RBP6.17□□□□□ -1.42
CDC6YJL194W UBP14P38237 781 aaKnown RBP6.17□□□□□ -1.42
CDC6YJL194W COX6P00427 148 aa6.16□□□□□ -1.42
CDC6YJL194W NOP7P53261 605 aaKnown RBP6.16□□□□□ -1.42
CDC6YJL194W JIP4Q03361 876 aa6.16□□□□□ -1.42
CDC6YJL194W AI4P03878 556 aa6.15□□□□□ -1.42
CDC6YJL194W YEL023CP39992 682 aa6.15□□□□□ -1.42
CDC6YJL194W VHR2P40041 505 aa6.15□□□□□ -1.42
CDC6YJL194W YLR326WQ06170 240 aaKnown RBP6.15□□□□□ -1.42
CDC6YJL194W MAM3Q12296 706 aa6.15□□□□□ -1.42
CDC6YJL194W MPH3P0CE00 602 aa6.15□□□□□ -1.43
CDC6YJL194W IOC2Q12072 812 aa6.15□□□□□ -1.43
CDC6YJL194W KEX1P09620 729 aa6.14□□□□□ -1.43
CDC6YJL194W PTC4P38089 393 aa6.14□□□□□ -1.43
CDC6YJL194W SLX8P40072 274 aa6.14□□□□□ -1.43
CDC6YJL194W YDR090CQ03193 310 aa6.14□□□□□ -1.43
CDC6YJL194W KIN1P13185 1064 aa6.12□□□□□ -1.43
CDC6YJL194W RAD54P32863 898 aa6.12□□□□□ -1.43
CDC6YJL194W YNL035CP53962 389 aaKnown RBP6.12□□□□□ -1.43
CDC6YJL194W KIC1P38692 1080 aa6.11□□□□□ -1.43
CDC6YJL194W NOP8Q08287 484 aaPredicted RBP6.11□□□□□ -1.43
CDC6YJL194W DAN4P47179 1161 aa6.1□□□□□ -1.43
CDC6YJL194W ILV3P39522 585 aaKnown RBP6.09□□□□□ -1.43
CDC6YJL194W IES2P40154 320 aa6.09□□□□□ -1.43
CDC6YJL194W BMT6Q12291 365 aa6.09□□□□□ -1.43
CDC6YJL194W LDB19Q12502 818 aa6.09□□□□□ -1.43
CDC6YJL194W SEC61P32915 480 aa6.09□□□□□ -1.44
CDC6YJL194W PCS60P38137 543 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44not detected
CDC6YJL194W YNR021WP53723 404 aaKnown RBP6.09□□□□□ -1.44
CDC6YJL194W TOP1P04786 769 aa6.08□□□□□ -1.44
CDC6YJL194W YRB30P53107 440 aaPredicted RBP6.08□□□□□ -1.44
CDC6YJL194W SSA1P10591 642 aaKnown RBP6.07□□□□□ -1.44
CDC6YJL194W RTG1P32607 177 aa6.06□□□□□ -1.44
CDC6YJL194W GEF1P37020 779 aa6.06□□□□□ -1.44
CDC6YJL194W NUP42P49686 430 aaKnown RBP6.06□□□□□ -1.44
CDC6YJL194W RPP1BP10622 106 aaKnown RBP6.03□□□□□ -1.44
CDC6YJL194W DIT2P21595 489 aa6.03□□□□□ -1.44
CDC6YJL194W SLI15P38283 698 aa6.03□□□□□ -1.44
CDC6YJL194W PSE1P32337 1089 aaKnown RBP6.02□□□□□ -1.45
CDC6YJL194W ORC6P38826 435 aa6.02□□□□□ -1.45
CDC6YJL194W TFG1P41895 735 aaPredicted RBP6.02□□□□□ -1.45
CDC6YJL194W SNU71P53207 620 aaKnown RBP6.02□□□□□ -1.45
CDC6YJL194W AIM7Q12156 149 aa6.02□□□□□ -1.45
CDC6YJL194W NCR1Q12200 1170 aa6.01□□□□□ -1.45
CDC6YJL194W BRL1P38770 471 aa6□□□□□ -1.45
CDC6YJL194W PML39Q03760 334 aa6□□□□□ -1.45
CDC6YJL194W SLD2P34252 453 aa5.99□□□□□ -1.45
CDC6YJL194W YDL129WQ07555 291 aa5.99□□□□□ -1.45
CDC6YJL194W GAP1P19145 602 aaPredicted RBP5.98□□□□□ -1.45
CDC6YJL194W GLC3P32775 704 aa5.98□□□□□ -1.45
CDC6YJL194W MET10P39692 1035 aa5.98□□□□□ -1.45
CDC6YJL194W CSC1Q06538 782 aa5.98□□□□□ -1.45
CDC6YJL194W MID1P41821 548 aa5.96□□□□□ -1.46
CDC6YJL194W SUB2Q07478 446 aaKnown RBP5.96□□□□□ -1.46
CDC6YJL194W ATF2P53296 535 aa5.95□□□□□ -1.46
CDC6YJL194W DPL1Q05567 589 aa5.95□□□□□ -1.46
CDC6YJL194W CDC73Q06697 393 aa5.95□□□□□ -1.46
CDC6YJL194W MPC54Q08550 464 aa5.95□□□□□ -1.46
CDC6YJL194W GUA1P38625 525 aaKnown RBP5.94□□□□□ -1.46
CDC6YJL194W PEX29Q03370 554 aa5.94□□□□□ -1.46
CDC6YJL194W TFB4Q12004 338 aa5.94□□□□□ -1.46
CDC6YJL194W RGR1P19263 1082 aa5.94□□□□□ -1.46
CDC6YJL194W CLB5P30283 435 aa5.94□□□□□ -1.46
CDC6YJL194W MVP1P40959 511 aaKnown RBP5.93□□□□□ -1.46
CDC6YJL194W BRN1P38170 754 aa5.92□□□□□ -1.46
CDC6YJL194W MRX12P47084 519 aa5.92□□□□□ -1.46
CDC6YJL194W PEX21P50091 288 aa5.91□□□□□ -1.46
CDC6YJL194W ISU2Q12056 156 aa5.91□□□□□ -1.46
CDC6YJL194W SAP30P38429 201 aa5.9□□□□□ -1.46
CDC6YJL194W HPC2Q01448 625 aa5.9□□□□□ -1.46
CDC6YJL194W TEA1P47988 759 aa5.89□□□□□ -1.47
CDC6YJL194W ARH1P48360 493 aa5.89□□□□□ -1.47
CDC6YJL194W NMA111P53920 997 aa5.89□□□□□ -1.47
CDC6YJL194W SSA4P22202 642 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms