RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C ESP1Q03018 1630 aa5.71□□□□□ -1.5
PAN1YIR006C QCR6P00127 147 aa5.7□□□□□ -1.5
PAN1YIR006C YPR148CQ06523 435 aa5.69□□□□□ -1.5
PAN1YIR006C TSC11P40061 1430 aa5.69□□□□□ -1.5
PAN1YIR006C TAF8Q03750 510 aa5.67□□□□□ -1.5
PAN1YIR006C PDR10P51533 1564 aa5.67□□□□□ -1.5
PAN1YIR006C RNA1P11745 407 aaKnown RBP5.66□□□□□ -1.5
PAN1YIR006C KOG1P38873 1557 aa5.66□□□□□ -1.5
PAN1YIR006C DAL5P15365 543 aa5.65□□□□□ -1.5
PAN1YIR006C MYO4P32492 1471 aa5.65□□□□□ -1.51
PAN1YIR006C SCC2Q04002 1493 aa5.65□□□□□ -1.51
PAN1YIR006C BPT1P14772 1559 aa5.64□□□□□ -1.51
PAN1YIR006C MDS3P53094 1487 aa5.64□□□□□ -1.51
PAN1YIR006C BUD27P43573 796 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
PAN1YIR006C ASF1P32447 279 aa5.64□□□□□ -1.51
PAN1YIR006C DNA2P38859 1522 aa5.63□□□□□ -1.51
PAN1YIR006C PRS1P32895 427 aaKnown RBP5.63□□□□□ -1.51
PAN1YIR006C VPS24P36095 224 aaKnown RBP5.63□□□□□ -1.51
PAN1YIR006C BDP1P46678 594 aa5.63□□□□□ -1.51
PAN1YIR006C PUF6Q04373 656 aaKnown RBP5.63□□□□□ -1.51
PAN1YIR006C YBR287WP38355 427 aa5.62□□□□□ -1.51
PAN1YIR006C YLR419WQ06698 1435 aaKnown RBP5.62□□□□□ -1.51
PAN1YIR006C ECM16Q04217 1267 aaKnown RBP5.62□□□□□ -1.51
PAN1YIR006C SRB8P25648 1427 aa5.62□□□□□ -1.51
PAN1YIR006C MPP10P47083 593 aaKnown RBP5.62□□□□□ -1.51
PAN1YIR006C TPD3P31383 635 aa5.61□□□□□ -1.51
PAN1YIR006C TOP2P06786 1428 aaKnown RBP5.61□□□□□ -1.51
PAN1YIR006C PDI1P17967 522 aaKnown RBP5.61□□□□□ -1.51
PAN1YIR006C IRC20Q06554 1556 aa5.61□□□□□ -1.51
PAN1YIR006C CSE4P36012 229 aa5.6□□□□□ -1.51
PAN1YIR006C RTG3P38165 486 aa5.6□□□□□ -1.51
PAN1YIR006C NUP157P40064 1391 aaKnown RBP5.6□□□□□ -1.51
PAN1YIR006C RKR1Q04781 1562 aa5.6□□□□□ -1.51
PAN1YIR006C NMD2P38798 1089 aaKnown RBP5.6□□□□□ -1.51
PAN1YIR006C RPP0P05317 312 aaKnown RBP5.6□□□□□ -1.51
PAN1YIR006C DJP1P40564 432 aa5.59□□□□□ -1.51
PAN1YIR006C RVB2Q12464 471 aaKnown RBP5.59□□□□□ -1.51
PAN1YIR006C YOR1P53049 1477 aa5.58□□□□□ -1.52
PAN1YIR006C MFT1P33441 392 aaKnown RBP5.58□□□□□ -1.52
PAN1YIR006C MIC60P36112 540 aa5.58□□□□□ -1.52
PAN1YIR006C RFC1P38630 861 aaKnown RBP5.58□□□□□ -1.52
PAN1YIR006C RIA1P53893 1110 aa5.58□□□□□ -1.52
PAN1YIR006C NCB2Q92317 146 aa5.58□□□□□ -1.52
PAN1YIR006C TPM1P17536 199 aaKnown RBP5.58□□□□□ -1.52
PAN1YIR006C ARP5P53946 755 aa5.58□□□□□ -1.52
PAN1YIR006C BNR1P40450 1375 aa5.58□□□□□ -1.52
PAN1YIR006C JIP3O13555 125 aa5.58□□□□□ -1.52
PAN1YIR006C RLF2Q12495 606 aa5.58□□□□□ -1.52
PAN1YIR006C ESC1Q03661 1658 aaKnown RBP5.57□□□□□ -1.52
PAN1YIR006C SNQ2P32568 1501 aaKnown RBP5.57□□□□□ -1.52
PAN1YIR006C YCF1P39109 1515 aaKnown RBP5.56□□□□□ -1.52
PAN1YIR006C TCB2P48231 1178 aa5.56□□□□□ -1.52
PAN1YIR006C CAB1Q04430 367 aa5.56□□□□□ -1.52
PAN1YIR006C YPK9Q12697 1472 aa5.56□□□□□ -1.52
PAN1YIR006C MDG1P53885 366 aa5.56□□□□□ -1.52
PAN1YIR006C MMS1Q06211 1407 aa5.56□□□□□ -1.52
PAN1YIR006C ARL1P38116 183 aaKnown RBP5.56□□□□□ -1.52
PAN1YIR006C PEX14P53112 341 aa5.56□□□□□ -1.52
PAN1YIR006C ITC1P53125 1264 aa5.56□□□□□ -1.52
PAN1YIR006C NOP58Q12499 511 aaKnown RBP5.56□□□□□ -1.52
PAN1YIR006C PKH1Q03407 766 aa5.55□□□□□ -1.52
PAN1YIR006C SUP35P05453 685 aaKnown RBP5.55□□□□□ -1.52
PAN1YIR006C ENP2P48234 707 aaKnown RBP5.55□□□□□ -1.52
PAN1YIR006C GAS4Q08271 471 aa5.55□□□□□ -1.52
PAN1YIR006C IME2P32581 645 aa5.54□□□□□ -1.52
PAN1YIR006C IOC4Q04213 475 aa5.54□□□□□ -1.52
PAN1YIR006C FPR4Q06205 392 aaPredicted RBP5.54□□□□□ -1.52
PAN1YIR006C VAS1P07806 1104 aaKnown RBP5.54□□□□□ -1.52
PAN1YIR006C TPM2P40414 161 aa5.53□□□□□ -1.52
PAN1YIR006C DPS1P04802 557 aaKnown RBP5.53□□□□□ -1.52
PAN1YIR006C ABP1P15891 592 aaKnown RBP5.53□□□□□ -1.52
PAN1YIR006C VPS15P22219 1454 aa5.53□□□□□ -1.52
PAN1YIR006C CFT1Q06632 1357 aaKnown RBP5.53□□□□□ -1.52
PAN1YIR006C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
PAN1YIR006C YNG2P38806 282 aaKnown RBP5.52□□□□□ -1.53
PAN1YIR006C YPP1P46951 817 aa5.52□□□□□ -1.53
PAN1YIR006C ESF1Q06344 628 aaKnown RBP5.52□□□□□ -1.53
PAN1YIR006C PDR5P33302 1511 aaKnown RBP5.51□□□□□ -1.53
PAN1YIR006C LEU2P04173 364 aaPredicted RBP5.51□□□□□ -1.53
PAN1YIR006C CAT8P39113 1433 aa5.51□□□□□ -1.53
PAN1YIR006C ULS1Q08562 1619 aa5.51□□□□□ -1.53
PAN1YIR006C BIK1P11709 440 aa5.51□□□□□ -1.53
PAN1YIR006C GRX4P32642 244 aa5.51□□□□□ -1.53
PAN1YIR006C ZDS1P50111 915 aaKnown RBP5.51□□□□□ -1.53
PAN1YIR006C ETT1Q08421 412 aaKnown RBP5.51□□□□□ -1.53
PAN1YIR006C RCM1P53972 490 aa5.5□□□□□ -1.53
PAN1YIR006C RRT14P40470 206 aa5.5□□□□□ -1.53
PAN1YIR006C SPB4P25808 606 aaPredicted RBP5.5□□□□□ -1.53
PAN1YIR006C TY3B-GQ99315 1547 aa5.5□□□□□ -1.53
PAN1YIR006C RSM25P40496 264 aa5.49□□□□□ -1.53
PAN1YIR006C NSE3Q05541 303 aa5.49□□□□□ -1.53
PAN1YIR006C ISW2Q08773 1120 aa5.49□□□□□ -1.53
PAN1YIR006C OPY1P38271 328 aa5.49□□□□□ -1.53
PAN1YIR006C PDR15Q04182 1529 aaKnown RBP5.49□□□□□ -1.53
PAN1YIR006C IQG1Q12280 1495 aa5.49□□□□□ -1.53
PAN1YIR006C ATG2P53855 1592 aa5.48□□□□□ -1.53
PAN1YIR006C ALD4P46367 519 aaKnown RBP5.48□□□□□ -1.53
PAN1YIR006C RMD1Q03441 430 aa5.48□□□□□ -1.53
PAN1YIR006C TY1B-DR3Q99231 1755 aa5.48□□□□□ -1.53
PAN1YIR006C SNF7P39929 240 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms