RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C NOP8Q08287 484 aaPredicted RBP7.2□□□□□ -1.26
SFB3YHR098C SWR1Q05471 1514 aa7.19□□□□□ -1.26
SFB3YHR098C OXP1P28273 1286 aa7.19□□□□□ -1.26
SFB3YHR098C GEA1P47102 1408 aaPredicted RBP7.19□□□□□ -1.26
SFB3YHR098C PDR15Q04182 1529 aaKnown RBP7.18□□□□□ -1.26
SFB3YHR098C YPK9Q12697 1472 aa7.17□□□□□ -1.26
SFB3YHR098C AIM44Q99299 758 aa7.16□□□□□ -1.26
SFB3YHR098C SNF7P39929 240 aaKnown RBP7.15□□□□□ -1.26
SFB3YHR098C CKB1P43639 278 aa7.12□□□□□ -1.27
SFB3YHR098C YLR271WQ06152 274 aa7.12□□□□□ -1.27
SFB3YHR098C IRC20Q06554 1556 aa7.12□□□□□ -1.27
SFB3YHR098C TY3B-GQ99315 1547 aa7.12□□□□□ -1.27
SFB3YHR098C NUP159P40477 1460 aa7.11□□□□□ -1.27
SFB3YHR098C ULS1Q08562 1619 aa7.11□□□□□ -1.27
SFB3YHR098C MHP1P43638 1398 aa7.11□□□□□ -1.27
SFB3YHR098C MMS1Q06211 1407 aa7.1□□□□□ -1.27
SFB3YHR098C DNF1P32660 1571 aa7.09□□□□□ -1.27
SFB3YHR098C ROX1P25042 368 aa7.08□□□□□ -1.28
SFB3YHR098C FPR3P38911 411 aaKnown RBP7.08□□□□□ -1.28
SFB3YHR098C YML020WQ03722 664 aa7.08□□□□□ -1.28
SFB3YHR098C ATG2P53855 1592 aa7.08□□□□□ -1.28
SFB3YHR098C GCN2P15442 1659 aa7.08□□□□□ -1.28
SFB3YHR098C VPS15P22219 1454 aa7.07□□□□□ -1.28
SFB3YHR098C ESC1Q03661 1658 aaKnown RBP7.07□□□□□ -1.28
SFB3YHR098C CWC22P53333 577 aaKnown RBP7.07□□□□□ -1.28
SFB3YHR098C QCR6P00127 147 aa7.06□□□□□ -1.28
SFB3YHR098C YGR130CP53278 816 aa7.06□□□□□ -1.28
SFB3YHR098C SLN1P39928 1220 aaPredicted RBP7.05□□□□□ -1.28
SFB3YHR098C DJP1P40564 432 aa7.05□□□□□ -1.28
SFB3YHR098C RPL17AP05740 184 aaKnown RBP7.05□□□□□ -1.28
SFB3YHR098C RPL17BP46990 184 aaKnown RBP7.05□□□□□ -1.28
SFB3YHR098C NST1P53935 1240 aa7.04□□□□□ -1.28
SFB3YHR098C TY1B-DR3Q99231 1755 aa7.04□□□□□ -1.28
SFB3YHR098C PAF1P38351 445 aa7.03□□□□□ -1.28
SFB3YHR098C YIR014WP40570 242 aa7.03□□□□□ -1.28
SFB3YHR098C ATG36P46983 293 aa7.03□□□□□ -1.28
SFB3YHR098C CTR9P89105 1077 aa7.01□□□□□ -1.29
SFB3YHR098C YBT1P32386 1661 aa7.01□□□□□ -1.29
SFB3YHR098C RPS0BP46654 252 aaKnown RBP7.01□□□□□ -1.29
SFB3YHR098C RPO31P04051 1460 aa7□□□□□ -1.29
SFB3YHR098C CST9Q06032 482 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-LR1P0C2J3 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-FP0CX63 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-GR2P0CX64 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-CP25384 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-DR2Q03494 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY1B-DR1Q03855 1755 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-DR3Q07791 1770 aaKnown RBP6.99□□□□□ -1.29
SFB3YHR098C TY2B-OR1Q12113 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-DR1Q12472 1770 aa6.99□□□□□ -1.29
SFB3YHR098C TY2B-OR2Q12501 1770 aa6.99□□□□□ -1.29
SFB3YHR098C PCT1P13259 424 aa6.98□□□□□ -1.29
SFB3YHR098C RVB2Q12464 471 aaKnown RBP6.98□□□□□ -1.29
SFB3YHR098C GEA2P39993 1459 aaKnown RBP6.97□□□□□ -1.29
SFB3YHR098C YPP1P46951 817 aa6.96□□□□□ -1.3
SFB3YHR098C PDS5Q04264 1277 aa6.96□□□□□ -1.3
SFB3YHR098C MAM3Q12296 706 aa6.96□□□□□ -1.3
SFB3YHR098C NOP7P53261 605 aaKnown RBP6.95□□□□□ -1.3
SFB3YHR098C TY2B-BQ12491 1770 aa6.95□□□□□ -1.3
SFB3YHR098C KIP3P53086 805 aaKnown RBP6.95□□□□□ -1.3
SFB3YHR098C YRB30P53107 440 aaPredicted RBP6.95□□□□□ -1.3
SFB3YHR098C CDC45Q08032 650 aa6.95□□□□□ -1.3
SFB3YHR098C NOP53Q12080 455 aaKnown RBP6.95□□□□□ -1.3
SFB3YHR098C PDR5P33302 1511 aaKnown RBP6.95□□□□□ -1.3
SFB3YHR098C EDE1P34216 1381 aa6.94□□□□□ -1.3
SFB3YHR098C NOP58Q12499 511 aaKnown RBP6.94□□□□□ -1.3
SFB3YHR098C NOT3P06102 836 aaKnown RBP6.93□□□□□ -1.3
SFB3YHR098C KNS1P32350 737 aaPredicted RBP6.93□□□□□ -1.3
SFB3YHR098C VPS27P40343 622 aaKnown RBP6.93□□□□□ -1.3
SFB3YHR098C MRX12P47084 519 aa6.93□□□□□ -1.3
SFB3YHR098C MSP1P28737 362 aa6.92□□□□□ -1.3
SFB3YHR098C ENV11P53246 860 aa6.92□□□□□ -1.3
SFB3YHR098C GDB1Q06625 1536 aa6.92□□□□□ -1.3
SFB3YHR098C RAD26P40352 1085 aa6.91□□□□□ -1.3
SFB3YHR098C NUG1P40010 520 aaKnown RBP6.91□□□□□ -1.3
SFB3YHR098C VPS24P36095 224 aaKnown RBP6.9□□□□□ -1.3
SFB3YHR098C RPG1P38249 964 aaKnown RBP6.9□□□□□ -1.3
SFB3YHR098C MGA2P40578 1113 aa6.9□□□□□ -1.3
SFB3YHR098C ARL1P38116 183 aaKnown RBP6.9□□□□□ -1.31
SFB3YHR098C NUP157P40064 1391 aaKnown RBP6.89□□□□□ -1.31
SFB3YHR098C RPP0P05317 312 aaKnown RBP6.89□□□□□ -1.31
SFB3YHR098C RNA1P11745 407 aaKnown RBP6.89□□□□□ -1.31
SFB3YHR098C DSF2P38213 736 aa6.89□□□□□ -1.31
SFB3YHR098C TY3B-IQ7LHG5 1498 aaKnown RBP6.88□□□□□ -1.31
SFB3YHR098C KIN1P13185 1064 aa6.88□□□□□ -1.31
SFB3YHR098C FPR4Q06205 392 aaPredicted RBP6.88□□□□□ -1.31
SFB3YHR098C TRM3Q07527 1436 aa6.88□□□□□ -1.31
SFB3YHR098C YAH1Q12184 172 aaKnown RBP6.87□□□□□ -1.31
SFB3YHR098C PAM1P37304 830 aaKnown RBP6.87□□□□□ -1.31
SFB3YHR098C LAM6Q08001 693 aa6.87□□□□□ -1.31
SFB3YHR098C ARO1P08566 1588 aaKnown RBP6.87□□□□□ -1.31
SFB3YHR098C RAM2P29703 316 aa6.86□□□□□ -1.31
SFB3YHR098C SLX8P40072 274 aa6.86□□□□□ -1.31
SFB3YHR098C DNF2Q12675 1612 aa6.86□□□□□ -1.31
SFB3YHR098C GUA1P38625 525 aaKnown RBP6.85□□□□□ -1.31
SFB3YHR098C SUB2Q07478 446 aaKnown RBP6.85□□□□□ -1.31
SFB3YHR098C SUI2P20459 304 aaKnown RBP6.85□□□□□ -1.31
SFB3YHR098C YDL144CQ07589 356 aa6.85□□□□□ -1.31
SFB3YHR098C TY1B-HO13535 1793 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-DR5P0C2I2 1755 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms