RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C RSM7P47150 247 aa4.44□□□□□ -1.7
XRN1YGL173C DMA2P53924 522 aa4.44□□□□□ -1.7
XRN1YGL173C TY1B-JR2P47100 1755 aaKnown RBP4.43□□□□□ -1.7
XRN1YGL173C TY1B-ER2Q03619 1755 aa4.43□□□□□ -1.7
XRN1YGL173C TY1B-MR1Q04214 1755 aa4.43□□□□□ -1.7
XRN1YGL173C TY1B-MR2Q04670 1755 aaKnown RBP4.43□□□□□ -1.7
XRN1YGL173C TY1B-LR1Q12088 1755 aaKnown RBP4.43□□□□□ -1.7
XRN1YGL173C TY1B-NL1Q12112 1755 aa4.43□□□□□ -1.7
XRN1YGL173C TY1B-GR1Q12141 1755 aa4.43□□□□□ -1.7
XRN1YGL173C TY1B-BLQ12490 1755 aa4.43□□□□□ -1.7
XRN1YGL173C ECM5Q03214 1411 aa4.43□□□□□ -1.7
XRN1YGL173C YPK9Q12697 1472 aa4.43□□□□□ -1.7
XRN1YGL173C MAK11P20484 414 aaKnown RBP4.39□□□□□ -1.71
XRN1YGL173C NUP170P38181 1502 aa4.39□□□□□ -1.71
XRN1YGL173C BUD4P47136 1447 aa4.39□□□□□ -1.71
XRN1YGL173C SET1P38827 1080 aaKnown RBP4.38□□□□□ -1.71
XRN1YGL173C AAD16Q02895 342 aa4.38□□□□□ -1.71
XRN1YGL173C YKR023WP36119 530 aaKnown RBP4.38□□□□□ -1.71
XRN1YGL173C KIN1P13185 1064 aa4.38□□□□□ -1.71
XRN1YGL173C GEF1P37020 779 aa4.37□□□□□ -1.71
XRN1YGL173C SVF1Q05515 481 aa4.37□□□□□ -1.71
XRN1YGL173C POL1P13382 1468 aa4.37□□□□□ -1.71
XRN1YGL173C RPO31P04051 1460 aa4.36□□□□□ -1.71
XRN1YGL173C MIF2P35201 549 aa4.36□□□□□ -1.71
XRN1YGL173C YCF1P39109 1515 aaKnown RBP4.36□□□□□ -1.71
XRN1YGL173C RPA190P10964 1664 aaKnown RBP4.36□□□□□ -1.71
XRN1YGL173C SIS2P36024 562 aa4.36□□□□□ -1.71
XRN1YGL173C YIL055CP40523 627 aaKnown RBP4.36□□□□□ -1.71
XRN1YGL173C MDS3P53094 1487 aa4.36□□□□□ -1.71
XRN1YGL173C SSA1P10591 642 aaKnown RBP4.35□□□□□ -1.71
XRN1YGL173C SCC2Q04002 1493 aa4.35□□□□□ -1.71
XRN1YGL173C RAM2P29703 316 aa4.35□□□□□ -1.71
XRN1YGL173C PBS2P08018 668 aa4.34□□□□□ -1.71
XRN1YGL173C ASF1P32447 279 aa4.34□□□□□ -1.71
XRN1YGL173C NUP42P49686 430 aaKnown RBP4.34□□□□□ -1.72
XRN1YGL173C COX6P00427 148 aa4.33□□□□□ -1.72
XRN1YGL173C SNU71P53207 620 aaKnown RBP4.32□□□□□ -1.72
XRN1YGL173C RPO21P04050 1733 aaKnown RBP4.32□□□□□ -1.72
XRN1YGL173C MRX12P47084 519 aa4.31□□□□□ -1.72
XRN1YGL173C YML020WQ03722 664 aa4.31□□□□□ -1.72
XRN1YGL173C TFC8Q12308 588 aa4.31□□□□□ -1.72
XRN1YGL173C MLP2P40457 1679 aa4.31□□□□□ -1.72
XRN1YGL173C ULS1Q08562 1619 aa4.31□□□□□ -1.72
XRN1YGL173C NSR1P27476 414 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
XRN1YGL173C MAM3Q12296 706 aa4.31□□□□□ -1.72
XRN1YGL173C STU1P38198 1513 aa4.31□□□□□ -1.72
XRN1YGL173C REF2P42073 533 aaPredicted RBP4.31□□□□□ -1.72
XRN1YGL173C SSA2P10592 639 aaKnown RBP4.3□□□□□ -1.72
XRN1YGL173C SLD2P34252 453 aa4.3□□□□□ -1.72
XRN1YGL173C SPB4P25808 606 aaPredicted RBP4.3□□□□□ -1.72
XRN1YGL173C HEM3P28789 327 aa4.3□□□□□ -1.72
XRN1YGL173C FPR4Q06205 392 aaPredicted RBP4.3□□□□□ -1.72
XRN1YGL173C PAM1P37304 830 aaKnown RBP4.3□□□□□ -1.72
XRN1YGL173C CSE4P36012 229 aa4.29□□□□□ -1.72
XRN1YGL173C YRB30P53107 440 aaPredicted RBP4.29□□□□□ -1.72
XRN1YGL173C NTE1Q04958 1679 aa4.29□□□□□ -1.72
XRN1YGL173C IRC20Q06554 1556 aa4.29□□□□□ -1.72
XRN1YGL173C YOR1P53049 1477 aa4.29□□□□□ -1.72
XRN1YGL173C PSE1P32337 1089 aaKnown RBP4.28□□□□□ -1.72
XRN1YGL173C NOP2P40991 618 aaKnown RBP4.28□□□□□ -1.72
XRN1YGL173C NOP7P53261 605 aaKnown RBP4.28□□□□□ -1.72
XRN1YGL173C AI2P03876 854 aa4.28□□□□□ -1.72
XRN1YGL173C CST9Q06032 482 aa4.28□□□□□ -1.72
XRN1YGL173C SUB2Q07478 446 aaKnown RBP4.28□□□□□ -1.72
XRN1YGL173C SLX8P40072 274 aa4.28□□□□□ -1.73
XRN1YGL173C SPT5P27692 1063 aaKnown RBP4.27□□□□□ -1.73
XRN1YGL173C YTA7P40340 1379 aa4.27□□□□□ -1.73
XRN1YGL173C SKI3P17883 1432 aaKnown RBP4.27□□□□□ -1.73
XRN1YGL173C PDR10P51533 1564 aa4.27□□□□□ -1.73
XRN1YGL173C YBT1P32386 1661 aa4.27□□□□□ -1.73
XRN1YGL173C BBC1P47068 1157 aa4.27□□□□□ -1.73
XRN1YGL173C YRF1-1P0CX20 1796 aa4.26□□□□□ -1.73
XRN1YGL173C YRF1-5P0CX21 1796 aa4.26□□□□□ -1.73
XRN1YGL173C YRF1-8P0CX22 1796 aa4.26□□□□□ -1.73
XRN1YGL173C TAF2P23255 1407 aa4.26□□□□□ -1.73
XRN1YGL173C RTG3P38165 486 aa4.26□□□□□ -1.73
XRN1YGL173C OCA5P38738 679 aa4.26□□□□□ -1.73
XRN1YGL173C SEN54Q02825 467 aaPredicted RBP4.26□□□□□ -1.73
XRN1YGL173C KEX1P09620 729 aa4.26□□□□□ -1.73
XRN1YGL173C VPS70P47161 811 aa4.26□□□□□ -1.73
XRN1YGL173C ESC1Q03661 1658 aaKnown RBP4.26□□□□□ -1.73
XRN1YGL173C RKR1Q04781 1562 aa4.25□□□□□ -1.73
XRN1YGL173C YGL081WP53156 320 aa4.25□□□□□ -1.73
XRN1YGL173C MYO4P32492 1471 aa4.25□□□□□ -1.73
XRN1YGL173C MAK16P10962 306 aaPredicted RBP4.25□□□□□ -1.73
XRN1YGL173C BPT1P14772 1559 aa4.24□□□□□ -1.73
XRN1YGL173C SSA4P22202 642 aaKnown RBP4.24□□□□□ -1.73
XRN1YGL173C IOC4Q04213 475 aa4.24□□□□□ -1.73
XRN1YGL173C CDC25P04821 1589 aa4.24□□□□□ -1.73
XRN1YGL173C CLB5P30283 435 aa4.22□□□□□ -1.73
XRN1YGL173C SSF1P38789 453 aaPredicted RBP4.22□□□□□ -1.73
XRN1YGL173C NMD2P38798 1089 aaKnown RBP4.22□□□□□ -1.73
XRN1YGL173C FAR11P53917 953 aa4.22□□□□□ -1.73
XRN1YGL173C SMC4Q12267 1418 aa4.22□□□□□ -1.73
XRN1YGL173C BRL1P38770 471 aa4.21□□□□□ -1.73
XRN1YGL173C SEC20P28791 383 aa4.21□□□□□ -1.74
XRN1YGL173C GUA1P38625 525 aaKnown RBP4.21□□□□□ -1.74
XRN1YGL173C OSW7P43611 510 aa4.21□□□□□ -1.74
XRN1YGL173C TY3B-GQ99315 1547 aa4.21□□□□□ -1.74
XRN1YGL173C CDC3P32457 520 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms