RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS23YGL056C GYP5Q12344 894 aa7.37□□□□□ -1.23
SDS23YGL056C HTA1P04911 132 aaKnown RBP7.35□□□□□ -1.23
SDS23YGL056C HTA2P04912 132 aa7.35□□□□□ -1.23
SDS23YGL056C YEL023CP39992 682 aa7.33□□□□□ -1.24
SDS23YGL056C DPS1P04802 557 aaKnown RBP7.33□□□□□ -1.24
SDS23YGL056C DCW1P36091 449 aa7.31□□□□□ -1.24
SDS23YGL056C YDR344CQ05510 147 aa7.31□□□□□ -1.24
SDS23YGL056C CST9Q06032 482 aa7.27□□□□□ -1.25
SDS23YGL056C RGA1P39083 1007 aa7.26□□□□□ -1.25
SDS23YGL056C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
SDS23YGL056C ELP4Q02884 456 aaKnown RBP7.24□□□□□ -1.25
SDS23YGL056C TAF7Q05021 590 aa7.23□□□□□ -1.25
SDS23YGL056C RCR1P38212 213 aa7.21□□□□□ -1.25
SDS23YGL056C PML39Q03760 334 aa7.21□□□□□ -1.25
SDS23YGL056C SRC1Q03707 834 aa7.2□□□□□ -1.26
SDS23YGL056C SSP1P38871 571 aa7.2□□□□□ -1.26
SDS23YGL056C MGA2P40578 1113 aa7.17□□□□□ -1.26
SDS23YGL056C ARH1P48360 493 aa7.17□□□□□ -1.26
SDS23YGL056C SPT23P35210 1082 aa7.08□□□□□ -1.28
SDS23YGL056C GRE2Q12068 342 aaKnown RBP7.08□□□□□ -1.28
SDS23YGL056C MID1P41821 548 aa7.07□□□□□ -1.28
SDS23YGL056C NST1P53935 1240 aa7.02□□□□□ -1.29
SDS23YGL056C LEO1P38439 464 aa7□□□□□ -1.29
SDS23YGL056C GUT1P32190 709 aa6.99□□□□□ -1.29
SDS23YGL056C YML082WQ04533 649 aaKnown RBP6.99□□□□□ -1.29
SDS23YGL056C HAP5Q02516 242 aa6.98□□□□□ -1.29
SDS23YGL056C ATH1P48016 1211 aa6.97□□□□□ -1.29
SDS23YGL056C BNI4P53858 892 aa6.96□□□□□ -1.29
SDS23YGL056C PEX29Q03370 554 aa6.95□□□□□ -1.3
SDS23YGL056C PTC3P34221 468 aaKnown RBP6.93□□□□□ -1.3
SDS23YGL056C SOL3P38858 249 aa6.93□□□□□ -1.3
SDS23YGL056C PTC2P39966 464 aaKnown RBP6.92□□□□□ -1.3
SDS23YGL056C RAS1P01119 309 aa6.91□□□□□ -1.3
SDS23YGL056C MPH3P0CE00 602 aa6.91□□□□□ -1.3
SDS23YGL056C AI4P03878 556 aa6.91□□□□□ -1.3
SDS23YGL056C MIF2P35201 549 aa6.9□□□□□ -1.31
SDS23YGL056C EDS1P38073 919 aa6.9□□□□□ -1.31
SDS23YGL056C ILV3P39522 585 aaKnown RBP6.86□□□□□ -1.31
SDS23YGL056C SAS10Q12136 610 aaPredicted RBP6.84□□□□□ -1.31
SDS23YGL056C MAK11P20484 414 aaKnown RBP6.83□□□□□ -1.32
SDS23YGL056C MPC54Q08550 464 aa6.83□□□□□ -1.32
SDS23YGL056C LEU3P08638 886 aa6.81□□□□□ -1.32
SDS23YGL056C TRK1P12685 1235 aa6.81□□□□□ -1.32
SDS23YGL056C NMA111P53920 997 aa6.8□□□□□ -1.32
SDS23YGL056C YPR015CQ12531 247 aa6.77□□□□□ -1.33
SDS23YGL056C YPL062WQ02781 134 aa6.76□□□□□ -1.33
SDS23YGL056C AMS1P22855 1083 aa6.75□□□□□ -1.33
SDS23YGL056C RAM2P29703 316 aa6.74□□□□□ -1.33
SDS23YGL056C COQ8P27697 501 aa6.74□□□□□ -1.33
SDS23YGL056C RAM1P22007 431 aa6.73□□□□□ -1.33
SDS23YGL056C YGR273CP53329 174 aa6.71□□□□□ -1.34
SDS23YGL056C DPL1Q05567 589 aa6.71□□□□□ -1.34
SDS23YGL056C SLI15P38283 698 aa6.69□□□□□ -1.34
SDS23YGL056C GYP1Q08484 637 aa6.66□□□□□ -1.34
SDS23YGL056C SDH2P21801 266 aa6.65□□□□□ -1.34
SDS23YGL056C ISU2Q12056 156 aa6.64□□□□□ -1.35
SDS23YGL056C NOP53Q12080 455 aaKnown RBP6.62□□□□□ -1.35
SDS23YGL056C SAS4Q04003 481 aa6.61□□□□□ -1.35
SDS23YGL056C RPN1P38764 993 aaKnown RBP6.56□□□□□ -1.36
SDS23YGL056C YEL077CQ3E7X8 1277 aa6.55□□□□□ -1.36
SDS23YGL056C DMA2P53924 522 aa6.54□□□□□ -1.36
SDS23YGL056C PDR1P12383 1068 aa6.52□□□□□ -1.36
SDS23YGL056C CDC73Q06697 393 aa6.52□□□□□ -1.37
SDS23YGL056C KEX1P09620 729 aa6.5□□□□□ -1.37
SDS23YGL056C BRE2P43132 505 aa6.49□□□□□ -1.37
SDS23YGL056C GAR1P28007 205 aaKnown RBP6.48□□□□□ -1.37
SDS23YGL056C MRF1P30775 413 aaPredicted RBP6.48□□□□□ -1.37
SDS23YGL056C SET1P38827 1080 aaKnown RBP6.48□□□□□ -1.37
SDS23YGL056C YPR148CQ06523 435 aa6.48□□□□□ -1.37
SDS23YGL056C SPB4P25808 606 aaPredicted RBP6.45□□□□□ -1.38
SDS23YGL056C VPS70P47161 811 aa6.45□□□□□ -1.38
SDS23YGL056C GCR2Q01722 534 aa6.45□□□□□ -1.38
SDS23YGL056C GBP2P25555 427 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
SDS23YGL056C CKB1P43639 278 aa6.44□□□□□ -1.38
SDS23YGL056C AIR1P40507 360 aaKnown RBP6.41□□□□□ -1.38
SDS23YGL056C BUD20Q08004 166 aaPredicted RBP6.4□□□□□ -1.38
SDS23YGL056C IFH1P39520 1085 aa6.39□□□□□ -1.39
SDS23YGL056C PRT1P06103 763 aaKnown RBP6.38□□□□□ -1.39
SDS23YGL056C CLA4P48562 842 aa6.37□□□□□ -1.39
SDS23YGL056C ERG12P07277 443 aa6.35□□□□□ -1.39
SDS23YGL056C UBP14P38237 781 aaKnown RBP6.35□□□□□ -1.39
SDS23YGL056C YLR326WQ06170 240 aaKnown RBP6.35□□□□□ -1.39
SDS23YGL056C DSF2P38213 736 aa6.35□□□□□ -1.39
SDS23YGL056C CST6P40535 587 aa6.35□□□□□ -1.39
SDS23YGL056C RLF2Q12495 606 aa6.34□□□□□ -1.39
SDS23YGL056C MET22P32179 357 aa6.33□□□□□ -1.4
SDS23YGL056C PCS60P38137 543 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SDS23YGL056C PBS2P08018 668 aa6.31□□□□□ -1.4
SDS23YGL056C RPP1BP10622 106 aaKnown RBP6.31□□□□□ -1.4
SDS23YGL056C STR2P47164 639 aa6.31□□□□□ -1.4
SDS23YGL056C ENV9Q08651 330 aa6.31□□□□□ -1.4
SDS23YGL056C LAM6Q08001 693 aa6.3□□□□□ -1.4
SDS23YGL056C CDC4P07834 779 aa6.28□□□□□ -1.4
SDS23YGL056C KIN1P13185 1064 aa6.28□□□□□ -1.4
SDS23YGL056C ISM1P48526 1002 aa6.28□□□□□ -1.4
SDS23YGL056C YNR021WP53723 404 aaKnown RBP6.28□□□□□ -1.4
SDS23YGL056C YRR1Q12172 810 aa6.27□□□□□ -1.41
SDS23YGL056C RAD54P32863 898 aa6.27□□□□□ -1.41
SDS23YGL056C VHR2P40041 505 aa6.27□□□□□ -1.41
SDS23YGL056C GLC3P32775 704 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms