RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W GYP5Q12344 894 aa6.99□□□□□ -1.29
UBP6YFR010W ABP1P15891 592 aaKnown RBP6.96□□□□□ -1.29
UBP6YFR010W HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
UBP6YFR010W HTA2P04912 132 aa6.96□□□□□ -1.3
UBP6YFR010W DCW1P36091 449 aa6.96□□□□□ -1.3
UBP6YFR010W PRE3P38624 215 aa6.95□□□□□ -1.3
UBP6YFR010W MAK11P20484 414 aaKnown RBP6.93□□□□□ -1.3
UBP6YFR010W PTC4P38089 393 aa6.92□□□□□ -1.3
UBP6YFR010W YEL023CP39992 682 aa6.92□□□□□ -1.3
UBP6YFR010W MIF2P35201 549 aa6.85□□□□□ -1.31
UBP6YFR010W VRP1P37370 817 aa6.84□□□□□ -1.31
UBP6YFR010W EDS1P38073 919 aa6.84□□□□□ -1.31
UBP6YFR010W COQ8P27697 501 aa6.83□□□□□ -1.32
UBP6YFR010W XDJ1P39102 459 aa6.81□□□□□ -1.32
UBP6YFR010W ELP4Q02884 456 aaKnown RBP6.81□□□□□ -1.32
UBP6YFR010W PML39Q03760 334 aa6.81□□□□□ -1.32
UBP6YFR010W PTC3P34221 468 aaKnown RBP6.79□□□□□ -1.32
UBP6YFR010W YDR344CQ05510 147 aa6.79□□□□□ -1.32
UBP6YFR010W GRE2Q12068 342 aaKnown RBP6.78□□□□□ -1.32
UBP6YFR010W ATH1P48016 1211 aa6.74□□□□□ -1.33
UBP6YFR010W DPS1P04802 557 aaKnown RBP6.73□□□□□ -1.33
UBP6YFR010W GUT1P32190 709 aa6.72□□□□□ -1.33
UBP6YFR010W NOP53Q12080 455 aaKnown RBP6.71□□□□□ -1.33
UBP6YFR010W SET1P38827 1080 aaKnown RBP6.71□□□□□ -1.34
UBP6YFR010W MID1P41821 548 aa6.68□□□□□ -1.34
UBP6YFR010W ARH1P48360 493 aa6.68□□□□□ -1.34
UBP6YFR010W SOL3P38858 249 aa6.65□□□□□ -1.35
UBP6YFR010W NST1P53935 1240 aa6.65□□□□□ -1.35
UBP6YFR010W PEX29Q03370 554 aa6.65□□□□□ -1.35
UBP6YFR010W SPT23P35210 1082 aa6.63□□□□□ -1.35
UBP6YFR010W DMA1P38823 416 aa6.63□□□□□ -1.35
UBP6YFR010W YGR273CP53329 174 aa6.6□□□□□ -1.35
UBP6YFR010W ILV3P39522 585 aaKnown RBP6.58□□□□□ -1.36
UBP6YFR010W AI4P03878 556 aa6.57□□□□□ -1.36
UBP6YFR010W MPH3P0CE00 602 aa6.57□□□□□ -1.36
UBP6YFR010W HAP5Q02516 242 aa6.57□□□□□ -1.36
UBP6YFR010W LEO1P38439 464 aa6.56□□□□□ -1.36
UBP6YFR010W IFH1P39520 1085 aa6.56□□□□□ -1.36
UBP6YFR010W YPR148CQ06523 435 aa6.55□□□□□ -1.36
UBP6YFR010W PTC2P39966 464 aaKnown RBP6.53□□□□□ -1.36
UBP6YFR010W BNI4P53858 892 aa6.52□□□□□ -1.37
UBP6YFR010W SRC1Q03707 834 aa6.52□□□□□ -1.37
UBP6YFR010W YML082WQ04533 649 aaKnown RBP6.5□□□□□ -1.37
UBP6YFR010W KEX1P09620 729 aa6.5□□□□□ -1.37
UBP6YFR010W VHR2P40041 505 aa6.49□□□□□ -1.37
UBP6YFR010W YLR326WQ06170 240 aaKnown RBP6.49□□□□□ -1.37
UBP6YFR010W UBP14P38237 781 aaKnown RBP6.48□□□□□ -1.37
UBP6YFR010W VPS70P47161 811 aa6.48□□□□□ -1.37
UBP6YFR010W MPC54Q08550 464 aa6.48□□□□□ -1.37
UBP6YFR010W RGA2Q06407 1009 aa6.47□□□□□ -1.37
UBP6YFR010W SLI15P38283 698 aa6.45□□□□□ -1.38
UBP6YFR010W NMA111P53920 997 aa6.45□□□□□ -1.38
UBP6YFR010W REF2P42073 533 aaPredicted RBP6.43□□□□□ -1.38
UBP6YFR010W SAS10Q12136 610 aaPredicted RBP6.43□□□□□ -1.38
UBP6YFR010W RAD54P32863 898 aa6.42□□□□□ -1.38
UBP6YFR010W PCS60P38137 543 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
UBP6YFR010W RGA1P39083 1007 aa6.41□□□□□ -1.38
UBP6YFR010W YDR090CQ03193 310 aa6.41□□□□□ -1.38
UBP6YFR010W RAS1P01119 309 aa6.4□□□□□ -1.38
UBP6YFR010W DPL1Q05567 589 aa6.4□□□□□ -1.39
UBP6YFR010W KIC1P38692 1080 aa6.36□□□□□ -1.39
UBP6YFR010W CKB1P43639 278 aa6.36□□□□□ -1.39
UBP6YFR010W CDC73Q06697 393 aa6.36□□□□□ -1.39
UBP6YFR010W YPR015CQ12531 247 aa6.35□□□□□ -1.39
UBP6YFR010W MAK21Q12176 1025 aaKnown RBP6.35□□□□□ -1.39
UBP6YFR010W GYP1Q08484 637 aa6.34□□□□□ -1.39
UBP6YFR010W COX6P00427 148 aa6.32□□□□□ -1.4
UBP6YFR010W PBS2P08018 668 aa6.31□□□□□ -1.4
UBP6YFR010W ISU2Q12056 156 aa6.31□□□□□ -1.4
UBP6YFR010W RPP1BP10622 106 aaKnown RBP6.3□□□□□ -1.4
UBP6YFR010W TRK1P12685 1235 aa6.3□□□□□ -1.4
UBP6YFR010W RAM1P22007 431 aa6.3□□□□□ -1.4
UBP6YFR010W AMS1P22855 1083 aa6.29□□□□□ -1.4
UBP6YFR010W ORC6P38826 435 aa6.29□□□□□ -1.4
UBP6YFR010W GAP1P19145 602 aaPredicted RBP6.27□□□□□ -1.41
UBP6YFR010W DSF2P38213 736 aa6.26□□□□□ -1.41
UBP6YFR010W MAM3Q12296 706 aa6.25□□□□□ -1.41
UBP6YFR010W PDR1P12383 1068 aa6.24□□□□□ -1.41
UBP6YFR010W CSC1Q06538 782 aa6.24□□□□□ -1.41
UBP6YFR010W SPB4P25808 606 aaPredicted RBP6.22□□□□□ -1.41
UBP6YFR010W IES2P40154 320 aa6.22□□□□□ -1.41
UBP6YFR010W PEX21P50091 288 aa6.22□□□□□ -1.41
UBP6YFR010W SAS4Q04003 481 aa6.22□□□□□ -1.41
UBP6YFR010W TFB4Q12004 338 aa6.22□□□□□ -1.41
UBP6YFR010W YRR1Q12172 810 aa6.2□□□□□ -1.42
UBP6YFR010W MVP1P40959 511 aaKnown RBP6.2□□□□□ -1.42
UBP6YFR010W TUM1Q08686 304 aaKnown RBP6.2□□□□□ -1.42
UBP6YFR010W SDH2P21801 266 aa6.19□□□□□ -1.42
UBP6YFR010W YEL077CQ3E7X8 1277 aa6.19□□□□□ -1.42
UBP6YFR010W RGR1P19263 1082 aa6.18□□□□□ -1.42
UBP6YFR010W NUP42P49686 430 aaKnown RBP6.18□□□□□ -1.42
UBP6YFR010W LEU3P08638 886 aa6.16□□□□□ -1.42
UBP6YFR010W PSE1P32337 1089 aaKnown RBP6.16□□□□□ -1.42
UBP6YFR010W MRF1P30775 413 aaPredicted RBP6.14□□□□□ -1.43
UBP6YFR010W NUD1P32336 851 aa6.14□□□□□ -1.43
UBP6YFR010W STR2P47164 639 aa6.14□□□□□ -1.43
UBP6YFR010W YPR109WQ06104 294 aa6.14□□□□□ -1.43
UBP6YFR010W DIT2P21595 489 aa6.13□□□□□ -1.43
UBP6YFR010W NAP1P25293 417 aaKnown RBP6.13□□□□□ -1.43
UBP6YFR010W ISM1P48526 1002 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms