RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W DMA1P38823 416 aa5.95□□□□□ -1.46
NIC96YFR002W RTG1P32607 177 aa5.94□□□□□ -1.46
NIC96YFR002W YNL035CP53962 389 aaKnown RBP5.94□□□□□ -1.46
NIC96YFR002W YEL023CP39992 682 aa5.93□□□□□ -1.46
NIC96YFR002W DAN4P47179 1161 aa5.93□□□□□ -1.46
NIC96YFR002W SOL3P38858 249 aa5.92□□□□□ -1.46
NIC96YFR002W NST1P53935 1240 aa5.92□□□□□ -1.46
NIC96YFR002W JIP4Q03361 876 aa5.92□□□□□ -1.46
NIC96YFR002W SEC61P32915 480 aa5.9□□□□□ -1.46
NIC96YFR002W PTC4P38089 393 aa5.9□□□□□ -1.46
NIC96YFR002W NCR1Q12200 1170 aa5.89□□□□□ -1.47
NIC96YFR002W YGR273CP53329 174 aa5.86□□□□□ -1.47
NIC96YFR002W YPR148CQ06523 435 aa5.86□□□□□ -1.47
NIC96YFR002W ILV3P39522 585 aaKnown RBP5.85□□□□□ -1.47
NIC96YFR002W IFH1P39520 1085 aa5.84□□□□□ -1.47
NIC96YFR002W YJL171CP46992 396 aa5.84□□□□□ -1.47
NIC96YFR002W AI4P03878 556 aa5.83□□□□□ -1.48
NIC96YFR002W MPH3P0CE00 602 aa5.83□□□□□ -1.48
NIC96YFR002W BMT6Q12291 365 aa5.82□□□□□ -1.48
NIC96YFR002W TFG1P41895 735 aaPredicted RBP5.81□□□□□ -1.48
NIC96YFR002W YDL129WQ07555 291 aa5.81□□□□□ -1.48
NIC96YFR002W PML39Q03760 334 aa5.8□□□□□ -1.48
NIC96YFR002W SAP30P38429 201 aa5.79□□□□□ -1.48
NIC96YFR002W VPS70P47161 811 aa5.79□□□□□ -1.48
NIC96YFR002W UBP14P38237 781 aaKnown RBP5.79□□□□□ -1.48
NIC96YFR002W YLR326WQ06170 240 aaKnown RBP5.78□□□□□ -1.48
NIC96YFR002W SAS10Q12136 610 aaPredicted RBP5.78□□□□□ -1.48
NIC96YFR002W KEX1P09620 729 aa5.78□□□□□ -1.48
NIC96YFR002W MID1P41821 548 aa5.77□□□□□ -1.49
NIC96YFR002W VHR2P40041 505 aa5.77□□□□□ -1.49
NIC96YFR002W RQC2Q12532 1038 aaKnown RBP5.77□□□□□ -1.49
NIC96YFR002W YDR344CQ05510 147 aa5.75□□□□□ -1.49
NIC96YFR002W SLI15P38283 698 aa5.74□□□□□ -1.49
NIC96YFR002W YDR090CQ03193 310 aa5.74□□□□□ -1.49
NIC96YFR002W REF2P42073 533 aaPredicted RBP5.73□□□□□ -1.49
NIC96YFR002W PCS60P38137 543 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
NIC96YFR002W RAD54P32863 898 aa5.7□□□□□ -1.5
NIC96YFR002W MPC54Q08550 464 aa5.7□□□□□ -1.5
NIC96YFR002W CKB1P43639 278 aa5.69□□□□□ -1.5
NIC96YFR002W PRE3P38624 215 aa5.69□□□□□ -1.5
NIC96YFR002W PEX29Q03370 554 aa5.69□□□□□ -1.5
NIC96YFR002W ARH1P48360 493 aa5.68□□□□□ -1.5
NIC96YFR002W CHL1P22516 861 aaPredicted RBP5.67□□□□□ -1.5
NIC96YFR002W CDC73Q06697 393 aa5.66□□□□□ -1.5
NIC96YFR002W COX6P00427 148 aa5.65□□□□□ -1.5
NIC96YFR002W DPL1Q05567 589 aa5.65□□□□□ -1.5
NIC96YFR002W MAK21Q12176 1025 aaKnown RBP5.65□□□□□ -1.5
NIC96YFR002W PBS2P08018 668 aa5.65□□□□□ -1.51
NIC96YFR002W ELP4Q02884 456 aaKnown RBP5.65□□□□□ -1.51
NIC96YFR002W KIC1P38692 1080 aa5.64□□□□□ -1.51
NIC96YFR002W NMA111P53920 997 aa5.63□□□□□ -1.51
NIC96YFR002W HAP5Q02516 242 aa5.63□□□□□ -1.51
NIC96YFR002W DSF2P38213 736 aa5.6□□□□□ -1.51
NIC96YFR002W GAP1P19145 602 aaPredicted RBP5.6□□□□□ -1.51
NIC96YFR002W ORC6P38826 435 aa5.6□□□□□ -1.51
NIC96YFR002W BNI4P53858 892 aa5.59□□□□□ -1.51
NIC96YFR002W SPT23P35210 1082 aa5.59□□□□□ -1.51
NIC96YFR002W ISU2Q12056 156 aa5.59□□□□□ -1.51
NIC96YFR002W RPP1BP10622 106 aaKnown RBP5.56□□□□□ -1.52
NIC96YFR002W MAM3Q12296 706 aa5.56□□□□□ -1.52
NIC96YFR002W SPB4P25808 606 aaPredicted RBP5.56□□□□□ -1.52
NIC96YFR002W BCK2P33306 851 aa5.56□□□□□ -1.52
NIC96YFR002W CSC1Q06538 782 aa5.55□□□□□ -1.52
NIC96YFR002W IES2P40154 320 aa5.54□□□□□ -1.52
NIC96YFR002W RAM1P22007 431 aa5.54□□□□□ -1.52
NIC96YFR002W YML082WQ04533 649 aaKnown RBP5.54□□□□□ -1.52
NIC96YFR002W PTC2P39966 464 aaKnown RBP5.53□□□□□ -1.52
NIC96YFR002W PDR1P12383 1068 aa5.53□□□□□ -1.52
NIC96YFR002W VRP1P37370 817 aa5.53□□□□□ -1.52
NIC96YFR002W MVP1P40959 511 aaKnown RBP5.53□□□□□ -1.52
NIC96YFR002W NUP42P49686 430 aaKnown RBP5.53□□□□□ -1.52
NIC96YFR002W TFB4Q12004 338 aa5.53□□□□□ -1.52
NIC96YFR002W YPR015CQ12531 247 aa5.53□□□□□ -1.52
NIC96YFR002W RGR1P19263 1082 aa5.52□□□□□ -1.53
NIC96YFR002W YRR1Q12172 810 aa5.51□□□□□ -1.53
NIC96YFR002W PEX21P50091 288 aa5.5□□□□□ -1.53
NIC96YFR002W TUM1Q08686 304 aaKnown RBP5.5□□□□□ -1.53
NIC96YFR002W PSE1P32337 1089 aaKnown RBP5.5□□□□□ -1.53
NIC96YFR002W DIT2P21595 489 aa5.49□□□□□ -1.53
NIC96YFR002W YPR109WQ06104 294 aa5.47□□□□□ -1.53
NIC96YFR002W XDJ1P39102 459 aa5.47□□□□□ -1.53
NIC96YFR002W STR2P47164 639 aa5.45□□□□□ -1.54
NIC96YFR002W NUD1P32336 851 aa5.45□□□□□ -1.54
NIC96YFR002W ISM1P48526 1002 aa5.44□□□□□ -1.54
NIC96YFR002W BUD20Q08004 166 aaPredicted RBP5.43□□□□□ -1.54
NIC96YFR002W CLB5P30283 435 aa5.41□□□□□ -1.54
NIC96YFR002W LEU3P08638 886 aa5.4□□□□□ -1.54
NIC96YFR002W YNR021WP53723 404 aaKnown RBP5.4□□□□□ -1.54
NIC96YFR002W TY1A-DR4O74302 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-HP0C2I4 478 aaKnown RBP5.39□□□□□ -1.55
NIC96YFR002W TY1A-AP0CX57 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-PR1P0CX58 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-ORP0CX59 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-PR2P0CX60 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-DR5P0CX65 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-ER2P0CX66 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-GR3P0CX67 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-LR1P0CX68 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-MR2P0CX69 440 aa5.39□□□□□ -1.55
NIC96YFR002W TY1A-JR2P47099 440 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms