RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeastyeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAD4YER162C TY1B-GR1Q12141 1755 aa6.17□□□□□ -1.42
RAD4YER162C TY1B-BLQ12490 1755 aa6.17□□□□□ -1.42
RAD4YER162C SMC4Q12267 1418 aa6.16□□□□□ -1.42
RAD4YER162C NTE1Q04958 1679 aa6.16□□□□□ -1.42
RAD4YER162C TFA1P36100 482 aa6.16□□□□□ -1.42
RAD4YER162C POL1P13382 1468 aa6.15□□□□□ -1.42
RAD4YER162C SPP41P38904 1435 aa6.14□□□□□ -1.43
RAD4YER162C RPO21P04050 1733 aaKnown RBP6.14□□□□□ -1.43
RAD4YER162C YOR1P53049 1477 aa6.12□□□□□ -1.43
RAD4YER162C SNT2P53127 1403 aa6.11□□□□□ -1.43
RAD4YER162C TSC11P40061 1430 aa6.11□□□□□ -1.43
RAD4YER162C YOR093CQ12275 1648 aa6.1□□□□□ -1.43
RAD4YER162C VTH1P40438 1549 aa6.1□□□□□ -1.43
RAD4YER162C VTH2P40890 1549 aa6.1□□□□□ -1.43
RAD4YER162C NUP170P38181 1502 aa6.09□□□□□ -1.43
RAD4YER162C TAF7Q05021 590 aa6.08□□□□□ -1.44
RAD4YER162C SPO14P36126 1683 aa6.06□□□□□ -1.44
RAD4YER162C MYO4P32492 1471 aa6.06□□□□□ -1.44
RAD4YER162C STU1P38198 1513 aa6.03□□□□□ -1.44
RAD4YER162C TRM3Q07527 1436 aa6.02□□□□□ -1.45
RAD4YER162C SNQ2P32568 1501 aaKnown RBP6.02□□□□□ -1.45
RAD4YER162C PDR12Q02785 1511 aa6.01□□□□□ -1.45
RAD4YER162C DOP1Q03921 1698 aa6□□□□□ -1.45
RAD4YER162C ULS1Q08562 1619 aa6□□□□□ -1.45
RAD4YER162C MET10P39692 1035 aa5.99□□□□□ -1.45
RAD4YER162C BFR2Q06631 534 aaKnown RBP5.95□□□□□ -1.46
RAD4YER162C IQG1Q12280 1495 aa5.94□□□□□ -1.46
RAD4YER162C GDB1Q06625 1536 aa5.94□□□□□ -1.46
RAD4YER162C BUD3P25558 1636 aa5.93□□□□□ -1.46
RAD4YER162C STH1P32597 1359 aa5.92□□□□□ -1.46
RAD4YER162C PDR10P51533 1564 aa5.92□□□□□ -1.46
RAD4YER162C PDR15Q04182 1529 aaKnown RBP5.9□□□□□ -1.47
RAD4YER162C MLP2P40457 1679 aa5.89□□□□□ -1.47
RAD4YER162C DNF3Q12674 1656 aa5.89□□□□□ -1.47
RAD4YER162C ARO1P08566 1588 aaKnown RBP5.88□□□□□ -1.47
RAD4YER162C YTA7P40340 1379 aa5.87□□□□□ -1.47
RAD4YER162C CHC1P22137 1653 aaKnown RBP5.87□□□□□ -1.47
RAD4YER162C NUP157P40064 1391 aaKnown RBP5.86□□□□□ -1.47
RAD4YER162C RTT106P40161 455 aa5.83□□□□□ -1.48
RAD4YER162C TY3B-GQ99315 1547 aa5.79□□□□□ -1.48
RAD4YER162C SEC7P11075 2009 aaKnown RBP5.77□□□□□ -1.49
RAD4YER162C YAP3P38749 330 aa5.77□□□□□ -1.49
RAD4YER162C MAK10Q02197 733 aa5.74□□□□□ -1.49
RAD4YER162C BNR1P40450 1375 aa5.72□□□□□ -1.49
RAD4YER162C HAP1P0CE41 1502 aa5.71□□□□□ -1.5
RAD4YER162C CAT8P39113 1433 aa5.7□□□□□ -1.5
RAD4YER162C USO1P25386 1790 aa5.7□□□□□ -1.5
RAD4YER162C TY1B-NL2Q99337 1749 aaKnown RBP5.68□□□□□ -1.5
RAD4YER162C URN1Q06525 465 aaKnown RBP5.67□□□□□ -1.5
RAD4YER162C YSP2Q06681 1438 aa5.67□□□□□ -1.5
RAD4YER162C YMR196WQ04336 1088 aa5.65□□□□□ -1.5
RAD4YER162C YBT1P32386 1661 aa5.64□□□□□ -1.51
RAD4YER162C NUP188P52593 1655 aaKnown RBP5.61□□□□□ -1.51
RAD4YER162C IML1P47170 1584 aa5.59□□□□□ -1.51
RAD4YER162C THI12P42883 340 aa5.59□□□□□ -1.51
RAD4YER162C THI5P43534 340 aa5.59□□□□□ -1.51
RAD4YER162C THI11P47183 340 aa5.59□□□□□ -1.51
RAD4YER162C THI13Q07748 340 aa5.59□□□□□ -1.51
RAD4YER162C YAH1Q12184 172 aaKnown RBP5.59□□□□□ -1.51
RAD4YER162C GLN1P32288 370 aaKnown RBP5.58□□□□□ -1.52
RAD4YER162C GEA1P47102 1408 aaPredicted RBP5.57□□□□□ -1.52
RAD4YER162C IPL1P38991 367 aa5.54□□□□□ -1.52
RAD4YER162C VMR1P38735 1592 aa5.54□□□□□ -1.52
RAD4YER162C CKB1P43639 278 aa5.53□□□□□ -1.52
RAD4YER162C IFH1P39520 1085 aa5.52□□□□□ -1.53
RAD4YER162C YIL055CP40523 627 aaKnown RBP5.5□□□□□ -1.53
RAD4YER162C SAS10Q12136 610 aaPredicted RBP5.5□□□□□ -1.53
RAD4YER162C SRB8P25648 1427 aa5.48□□□□□ -1.53
RAD4YER162C DMA1P38823 416 aa5.47□□□□□ -1.53
RAD4YER162C PTP3P40048 928 aa5.46□□□□□ -1.53
RAD4YER162C PRI1P10363 409 aa5.46□□□□□ -1.54
RAD4YER162C BCK1Q01389 1478 aa5.45□□□□□ -1.54
RAD4YER162C TYS1P36421 394 aaKnown RBP5.45□□□□□ -1.54
RAD4YER162C YMR074CQ04773 145 aa5.44□□□□□ -1.54
RAD4YER162C LEO1P38439 464 aa5.43□□□□□ -1.54
RAD4YER162C APP1P53933 587 aa5.42□□□□□ -1.54
RAD4YER162C CFT1Q06632 1357 aaKnown RBP5.4□□□□□ -1.54
RAD4YER162C PDR11P40550 1411 aa5.4□□□□□ -1.55
RAD4YER162C BUD21Q08492 214 aaPredicted RBP5.39□□□□□ -1.55
RAD4YER162C PDR5P33302 1511 aaKnown RBP5.37□□□□□ -1.55
RAD4YER162C REB1P21538 810 aa5.35□□□□□ -1.55
RAD4YER162C YNR029CP53729 429 aaKnown RBP5.34□□□□□ -1.56
RAD4YER162C GCN2P15442 1659 aa5.32□□□□□ -1.56
RAD4YER162C YRF1-2P40105 1681 aa5.32□□□□□ -1.56
RAD4YER162C BUD31P25337 157 aaPredicted RBP5.32□□□□□ -1.56
RAD4YER162C ENT1Q12518 454 aa5.32□□□□□ -1.56
RAD4YER162C ENV9Q08651 330 aa5.31□□□□□ -1.56
RAD4YER162C KRE5P22023 1365 aa5.31□□□□□ -1.56
RAD4YER162C AVT3P36062 692 aa5.3□□□□□ -1.56
RAD4YER162C RIA1P53893 1110 aa5.3□□□□□ -1.56
RAD4YER162C IMH1Q06704 911 aaKnown RBP5.3□□□□□ -1.56
RAD4YER162C MRX12P47084 519 aa5.29□□□□□ -1.56
RAD4YER162C NUP192P47054 1683 aa5.29□□□□□ -1.56
RAD4YER162C RRP5Q05022 1729 aaKnown RBP5.28□□□□□ -1.56
RAD4YER162C EDE1P34216 1381 aa5.27□□□□□ -1.57
RAD4YER162C SSA1P10591 642 aaKnown RBP5.26□□□□□ -1.57
RAD4YER162C GTT3P39996 337 aa5.26□□□□□ -1.57
RAD4YER162C UBP1P25037 809 aa5.23□□□□□ -1.57
RAD4YER162C TY3B-IQ7LHG5 1498 aaKnown RBP5.23□□□□□ -1.57
RAD4YER162C YBL086CP38177 466 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms