RNA–Protein interactions for RNA: YER058W

PET117, Transcript of Protein required for assembly of cytochrome c oxidase, yeastyeast

Gene PET117, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET117YER058W TY1B-GR1Q12141 1755 aa10.63□□□□□ -0.71
PET117YER058W TY1B-BLQ12490 1755 aa10.63□□□□□ -0.71
PET117YER058W MLP2P40457 1679 aa10.63□□□□□ -0.71
PET117YER058W NTE1Q04958 1679 aa10.6□□□□□ -0.71
PET117YER058W NUP159P40477 1460 aa10.6□□□□□ -0.71
PET117YER058W ULS1Q08562 1619 aa10.59□□□□□ -0.71
PET117YER058W GEA2P39993 1459 aaKnown RBP10.56□□□□□ -0.72
PET117YER058W RPO21P04050 1733 aaKnown RBP10.56□□□□□ -0.72
PET117YER058W RTT106P40161 455 aa10.56□□□□□ -0.72
PET117YER058W GEA1P47102 1408 aaPredicted RBP10.56□□□□□ -0.72
PET117YER058W IFH1P39520 1085 aa10.54□□□□□ -0.72
PET117YER058W IRC20Q06554 1556 aa10.48□□□□□ -0.73
PET117YER058W MET10P39692 1035 aa10.47□□□□□ -0.73
PET117YER058W IKI3Q06706 1349 aaKnown RBP10.46□□□□□ -0.73
PET117YER058W CAT8P39113 1433 aa10.46□□□□□ -0.74
PET117YER058W VPS15P22219 1454 aa10.46□□□□□ -0.74
PET117YER058W PDR12Q02785 1511 aa10.45□□□□□ -0.74
PET117YER058W LTE1P07866 1435 aa10.43□□□□□ -0.74
PET117YER058W YRF1-1P0CX20 1796 aa10.42□□□□□ -0.74
PET117YER058W YRF1-5P0CX21 1796 aa10.42□□□□□ -0.74
PET117YER058W YRF1-8P0CX22 1796 aa10.42□□□□□ -0.74
PET117YER058W TY3B-GQ99315 1547 aa10.41□□□□□ -0.74
PET117YER058W NUP170P38181 1502 aa10.38□□□□□ -0.75
PET117YER058W GDB1Q06625 1536 aa10.38□□□□□ -0.75
PET117YER058W NUP157P40064 1391 aaKnown RBP10.37□□□□□ -0.75
PET117YER058W SPO14P36126 1683 aa10.36□□□□□ -0.75
PET117YER058W PDR10P51533 1564 aa10.35□□□□□ -0.75
PET117YER058W YBT1P32386 1661 aa10.34□□□□□ -0.75
PET117YER058W IQG1Q12280 1495 aa10.3□□□□□ -0.76
PET117YER058W BUD3P25558 1636 aa10.29□□□□□ -0.76
PET117YER058W SRB8P25648 1427 aa10.28□□□□□ -0.76
PET117YER058W DRS2P39524 1355 aa10.27□□□□□ -0.76
PET117YER058W ARO1P08566 1588 aaKnown RBP10.27□□□□□ -0.76
PET117YER058W SSM4P40318 1319 aa10.27□□□□□ -0.77
PET117YER058W CKB1P43639 278 aa10.25□□□□□ -0.77
PET117YER058W TRM3Q07527 1436 aa10.22□□□□□ -0.77
PET117YER058W MMS1Q06211 1407 aa10.21□□□□□ -0.78
PET117YER058W YSP2Q06681 1438 aa10.2□□□□□ -0.78
PET117YER058W ITT1Q04638 464 aa10.16□□□□□ -0.78
PET117YER058W BNR1P40450 1375 aa10.14□□□□□ -0.79
PET117YER058W BUD21Q08492 214 aaPredicted RBP10.14□□□□□ -0.79
PET117YER058W DOP1Q03921 1698 aa10.13□□□□□ -0.79
PET117YER058W BNI1P41832 1953 aa10.12□□□□□ -0.79
PET117YER058W SEC7P11075 2009 aaKnown RBP10.07□□□□□ -0.8
PET117YER058W CHC1P22137 1653 aaKnown RBP10.06□□□□□ -0.8
PET117YER058W GCN2P15442 1659 aa10.03□□□□□ -0.8
PET117YER058W URN1Q06525 465 aaKnown RBP9.95□□□□□ -0.82
PET117YER058W DNF2Q12675 1612 aa9.94□□□□□ -0.82
PET117YER058W PDR5P33302 1511 aaKnown RBP9.93□□□□□ -0.82
PET117YER058W PAF1P38351 445 aa9.93□□□□□ -0.82
PET117YER058W YOR093CQ12275 1648 aa9.93□□□□□ -0.82
PET117YER058W NOP7P53261 605 aaKnown RBP9.91□□□□□ -0.82
PET117YER058W NUP188P52593 1655 aaKnown RBP9.9□□□□□ -0.83
PET117YER058W VMR1P38735 1592 aa9.87□□□□□ -0.83
PET117YER058W IML1P47170 1584 aa9.87□□□□□ -0.83
PET117YER058W YAP3P38749 330 aa9.86□□□□□ -0.83
PET117YER058W BFR2Q06631 534 aaKnown RBP9.86□□□□□ -0.83
PET117YER058W IPL1P38991 367 aa9.84□□□□□ -0.83
PET117YER058W RAV1P47104 1357 aa9.84□□□□□ -0.83
PET117YER058W ABP1P15891 592 aaKnown RBP9.82□□□□□ -0.84
PET117YER058W HAP1P0CE41 1502 aa9.81□□□□□ -0.84
PET117YER058W PDR11P40550 1411 aa9.8□□□□□ -0.84
PET117YER058W RTC1Q08281 1341 aa9.8□□□□□ -0.84
PET117YER058W TYS1P36421 394 aaKnown RBP9.76□□□□□ -0.85
PET117YER058W DNF3Q12674 1656 aa9.74□□□□□ -0.85
PET117YER058W POL5P39985 1022 aaKnown RBP9.72□□□□□ -0.85
PET117YER058W ESL2P36168 1195 aa9.69□□□□□ -0.86
PET117YER058W SCT1P32784 759 aa9.66□□□□□ -0.86
PET117YER058W MAK10Q02197 733 aa9.66□□□□□ -0.86
PET117YER058W TY3B-IQ7LHG5 1498 aaKnown RBP9.65□□□□□ -0.87
PET117YER058W TAF5P38129 798 aa9.64□□□□□ -0.87
PET117YER058W NUP192P47054 1683 aa9.62□□□□□ -0.87
PET117YER058W BCK1Q01389 1478 aa9.62□□□□□ -0.87
PET117YER058W ALD4P46367 519 aaKnown RBP9.62□□□□□ -0.87
PET117YER058W NAP1P25293 417 aaKnown RBP9.61□□□□□ -0.87
PET117YER058W MIF2P35201 549 aa9.61□□□□□ -0.87
PET117YER058W MRX12P47084 519 aa9.58□□□□□ -0.88
PET117YER058W RAD9P14737 1309 aa9.57□□□□□ -0.88
PET117YER058W KIP3P53086 805 aaKnown RBP9.57□□□□□ -0.88
PET117YER058W MHP1P43638 1398 aa9.56□□□□□ -0.88
PET117YER058W YLR419WQ06698 1435 aaKnown RBP9.56□□□□□ -0.88
PET117YER058W CAB1Q04430 367 aa9.55□□□□□ -0.88
PET117YER058W CFT1Q06632 1357 aaKnown RBP9.54□□□□□ -0.88
PET117YER058W TAF8Q03750 510 aa9.54□□□□□ -0.88
PET117YER058W KRE5P22023 1365 aa9.53□□□□□ -0.88
PET117YER058W SPE2P21182 396 aa9.53□□□□□ -0.88
PET117YER058W TY1B-NL2Q99337 1749 aaKnown RBP9.53□□□□□ -0.88
PET117YER058W SEC3P33332 1336 aaKnown RBP9.53□□□□□ -0.88
PET117YER058W ORC1P54784 914 aaPredicted RBP9.52□□□□□ -0.89
PET117YER058W RIA1P53893 1110 aa9.51□□□□□ -0.89
PET117YER058W YMR196WQ04336 1088 aa9.5□□□□□ -0.89
PET117YER058W YNR029CP53729 429 aaKnown RBP9.45□□□□□ -0.9
PET117YER058W CHZ1P40019 153 aaPredicted RBP9.43□□□□□ -0.9
PET117YER058W PDS5Q04264 1277 aa9.43□□□□□ -0.9
PET117YER058W USO1P25386 1790 aa9.4□□□□□ -0.9
PET117YER058W PSK1P31374 1356 aa9.4□□□□□ -0.9
PET117YER058W RCM1P53972 490 aa9.38□□□□□ -0.91
PET117YER058W SPT7P35177 1332 aa9.37□□□□□ -0.91
PET117YER058W CPS1P27614 576 aa9.37□□□□□ -0.91
PET117YER058W THI12P42883 340 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms