RNA–Protein interactions for RNA: YDR488C

PAC11, Transcript of Dynein intermediate chain, microtubule motor protein, yeastyeast

Gene PAC11, Length 1,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAC11YDR488C YPK9Q12697 1472 aa14.52□□□□□ -0.08
PAC11YDR488C MLP2P40457 1679 aa14.52□□□□□ -0.09
PAC11YDR488C MYO4P32492 1471 aa14.51□□□□□ -0.09
PAC11YDR488C IRC20Q06554 1556 aa14.5□□□□□ -0.09
PAC11YDR488C NMD2P38798 1089 aaKnown RBP14.5□□□□□ -0.09
PAC11YDR488C PAN1P32521 1480 aa14.49□□□□□ -0.09
PAC11YDR488C HSP82P02829 709 aaKnown RBP14.48□□□□□ -0.09
PAC11YDR488C ABP1P15891 592 aaKnown RBP14.48□□□□□ -0.09
PAC11YDR488C SMC3P47037 1230 aa14.48□□□□□ -0.09
PAC11YDR488C SCC2Q04002 1493 aa14.47□□□□□ -0.09
PAC11YDR488C PLP2Q12017 286 aa14.46□□□□□ -0.09
PAC11YDR488C EDE1P34216 1381 aa14.44□□□□□ -0.1
PAC11YDR488C NOT3P06102 836 aaKnown RBP14.44□□□□□ -0.1
PAC11YDR488C POL1P13382 1468 aa14.42□□□□□ -0.1
PAC11YDR488C RAD26P40352 1085 aa14.41□□□□□ -0.1
PAC11YDR488C PSH1Q12161 406 aa14.39□□□□□ -0.11
PAC11YDR488C TAF2P23255 1407 aa14.38□□□□□ -0.11
PAC11YDR488C MHP1P43638 1398 aa14.38□□□□□ -0.11
PAC11YDR488C YPP1P46951 817 aa14.37□□□□□ -0.11
PAC11YDR488C BPT1P14772 1559 aa14.37□□□□□ -0.11
PAC11YDR488C SIN3P22579 1536 aa14.35□□□□□ -0.11
PAC11YDR488C DJP1P40564 432 aa14.35□□□□□ -0.11
PAC11YDR488C REV3P14284 1504 aa14.33□□□□□ -0.11
PAC11YDR488C SSK2P53599 1579 aa14.32□□□□□ -0.12
PAC11YDR488C PCT1P13259 424 aa14.32□□□□□ -0.12
PAC11YDR488C PIL1P53252 339 aaKnown RBP14.32□□□□□ -0.12
PAC11YDR488C YNL011CP53980 444 aa14.32□□□□□ -0.12
PAC11YDR488C VPS4P52917 437 aa14.31□□□□□ -0.12
PAC11YDR488C MSP1P28737 362 aa14.29□□□□□ -0.12
PAC11YDR488C VPS24P36095 224 aaKnown RBP14.29□□□□□ -0.12
PAC11YDR488C MSH4P40965 878 aaPredicted RBP14.29□□□□□ -0.12
PAC11YDR488C TSC11P40061 1430 aa14.24□□□□□ -0.13
PAC11YDR488C KNS1P32350 737 aaPredicted RBP14.23□□□□□ -0.13
PAC11YDR488C ARL1P38116 183 aaKnown RBP14.23□□□□□ -0.13
PAC11YDR488C SIC1P38634 284 aa14.23□□□□□ -0.13
PAC11YDR488C PRP3Q03338 469 aaPredicted RBP14.21□□□□□ -0.13
PAC11YDR488C BYE1P36106 594 aa14.2□□□□□ -0.14
PAC11YDR488C RPN1P38764 993 aaKnown RBP14.2□□□□□ -0.14
PAC11YDR488C CHZ1P40019 153 aaPredicted RBP14.2□□□□□ -0.14
PAC11YDR488C SWE1P32944 819 aa14.19□□□□□ -0.14
PAC11YDR488C DSN1P40568 576 aa14.19□□□□□ -0.14
PAC11YDR488C CDC45Q08032 650 aa14.19□□□□□ -0.14
PAC11YDR488C MSH3P25336 1018 aa14.18□□□□□ -0.14
PAC11YDR488C NUP159P40477 1460 aa14.17□□□□□ -0.14
PAC11YDR488C YCF1P39109 1515 aaKnown RBP14.17□□□□□ -0.14
PAC11YDR488C CLB5P30283 435 aa14.16□□□□□ -0.14
PAC11YDR488C TRM3Q07527 1436 aa14.15□□□□□ -0.14
PAC11YDR488C TPM2P40414 161 aa14.14□□□□□ -0.15
PAC11YDR488C GEA1P47102 1408 aaPredicted RBP14.14□□□□□ -0.15
PAC11YDR488C KIP3P53086 805 aaKnown RBP14.14□□□□□ -0.15
PAC11YDR488C NNF2P53253 936 aa14.14□□□□□ -0.15
PAC11YDR488C RPP0P05317 312 aaKnown RBP14.13□□□□□ -0.15
PAC11YDR488C LSP1Q12230 341 aaKnown RBP14.13□□□□□ -0.15
PAC11YDR488C SNQ2P32568 1501 aaKnown RBP14.12□□□□□ -0.15
PAC11YDR488C MED8P38304 223 aa14.12□□□□□ -0.15
PAC11YDR488C VPS27P40343 622 aaKnown RBP14.12□□□□□ -0.15
PAC11YDR488C TAN1P53072 289 aaPredicted RBP14.12□□□□□ -0.15
PAC11YDR488C ETT1Q08421 412 aaKnown RBP14.12□□□□□ -0.15
PAC11YDR488C LTV1P34078 463 aa14.11□□□□□ -0.15
PAC11YDR488C DOS2P54858 310 aa14.11□□□□□ -0.15
PAC11YDR488C GCN2P15442 1659 aa14.11□□□□□ -0.15
PAC11YDR488C TCD1P38756 429 aa14.1□□□□□ -0.15
PAC11YDR488C RVB2Q12464 471 aaKnown RBP14.09□□□□□ -0.15
PAC11YDR488C SRP54P20424 541 aaKnown RBP14.08□□□□□ -0.15
PAC11YDR488C CIN4P39110 191 aa14.08□□□□□ -0.15
PAC11YDR488C BMS1Q08965 1183 aaKnown RBP14.08□□□□□ -0.15
PAC11YDR488C ECM1P39715 212 aa14.08□□□□□ -0.16
PAC11YDR488C VPS60Q03390 229 aa14.07□□□□□ -0.16
PAC11YDR488C ESP1Q03018 1630 aa14.06□□□□□ -0.16
PAC11YDR488C NST1P53935 1240 aa14.05□□□□□ -0.16
PAC11YDR488C YOR1P53049 1477 aa14.05□□□□□ -0.16
PAC11YDR488C MDS3P53094 1487 aa14.05□□□□□ -0.16
PAC11YDR488C RAD2P07276 1031 aa14.04□□□□□ -0.16
PAC11YDR488C TEA1P47988 759 aa14.04□□□□□ -0.16
PAC11YDR488C ESC2Q06340 456 aa14.04□□□□□ -0.16
PAC11YDR488C CBF5P33322 483 aaKnown RBP RIP-Chip data14.03□□□□□ -0.16not detected
PAC11YDR488C NOP8Q08287 484 aaPredicted RBP14.02□□□□□ -0.16
PAC11YDR488C NOP14Q99207 810 aaKnown RBP14.02□□□□□ -0.16
PAC11YDR488C CLB1P24868 471 aa14.01□□□□□ -0.17
PAC11YDR488C DEP1P31385 405 aa14.01□□□□□ -0.17
PAC11YDR488C RNT1Q02555 471 aa14.01□□□□□ -0.17
PAC11YDR488C ATG2P53855 1592 aa14.01□□□□□ -0.17
PAC11YDR488C IFH1P39520 1085 aa14.01□□□□□ -0.17
PAC11YDR488C NUP157P40064 1391 aaKnown RBP14.01□□□□□ -0.17
PAC11YDR488C GRX3Q03835 250 aa14.01□□□□□ -0.17
PAC11YDR488C RLP24Q07915 199 aaKnown RBP14.01□□□□□ -0.17
PAC11YDR488C RPN7Q06103 429 aaKnown RBP14□□□□□ -0.17
PAC11YDR488C HOS3Q02959 697 aaKnown RBP13.98□□□□□ -0.17
PAC11YDR488C LCD1Q04377 747 aa13.98□□□□□ -0.17
PAC11YDR488C SWI3P32591 825 aa13.97□□□□□ -0.17
PAC11YDR488C ECM16Q04217 1267 aaKnown RBP13.97□□□□□ -0.17
PAC11YDR488C RAD9P14737 1309 aa13.97□□□□□ -0.17
PAC11YDR488C PDS5Q04264 1277 aa13.97□□□□□ -0.17
PAC11YDR488C SAP190P36123 1033 aa13.94□□□□□ -0.18
PAC11YDR488C VPS72Q03388 795 aa13.92□□□□□ -0.18
PAC11YDR488C YSH1Q06224 779 aaPredicted RBP13.92□□□□□ -0.18
PAC11YDR488C PDR5P33302 1511 aaKnown RBP13.91□□□□□ -0.18
PAC11YDR488C PDR15Q04182 1529 aaKnown RBP13.91□□□□□ -0.18
PAC11YDR488C ESC1Q03661 1658 aaKnown RBP13.9□□□□□ -0.18
PAC11YDR488C RSC1P53236 928 aa13.9□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms