RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W WSC3Q12215 556 aa5.67□□□□□ -1.5
YDR340WYDR340W EDS1P38073 919 aa5.66□□□□□ -1.5
YDR340WYDR340W COX6P00427 148 aa5.64□□□□□ -1.51
YDR340WYDR340W YMR1P47147 688 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
YDR340WYDR340W HPC2Q01448 625 aa5.63□□□□□ -1.51
YDR340WYDR340W STS1P38637 319 aa5.62□□□□□ -1.51
YDR340WYDR340W YFR006WP43590 535 aa5.62□□□□□ -1.51
YDR340WYDR340W TFB3Q03290 321 aa5.62□□□□□ -1.51
YDR340WYDR340W DBP1P24784 617 aaKnown RBP5.6□□□□□ -1.51
YDR340WYDR340W PTC3P34221 468 aaKnown RBP5.59□□□□□ -1.51
YDR340WYDR340W BRL1P38770 471 aa5.59□□□□□ -1.51
YDR340WYDR340W TIF11P38912 153 aaKnown RBP5.59□□□□□ -1.51
YDR340WYDR340W AIR2Q12476 344 aaKnown RBP5.59□□□□□ -1.51
YDR340WYDR340W GTT3P39996 337 aa5.58□□□□□ -1.52
YDR340WYDR340W FKH1P40466 484 aa5.58□□□□□ -1.52
YDR340WYDR340W YML020WQ03722 664 aa5.58□□□□□ -1.52
YDR340WYDR340W YJL171CP46992 396 aa5.57□□□□□ -1.52
YDR340WYDR340W PKC1P24583 1151 aa5.56□□□□□ -1.52
YDR340WYDR340W VHR2P40041 505 aa5.56□□□□□ -1.52
YDR340WYDR340W SSA1P10591 642 aaKnown RBP5.55□□□□□ -1.52
YDR340WYDR340W SSA2P10592 639 aaKnown RBP5.54□□□□□ -1.52
YDR340WYDR340W SLX8P40072 274 aa5.54□□□□□ -1.52
YDR340WYDR340W GEF1P37020 779 aa5.53□□□□□ -1.52
YDR340WYDR340W YDR090CQ03193 310 aa5.53□□□□□ -1.52
YDR340WYDR340W SUB2Q07478 446 aaKnown RBP5.53□□□□□ -1.52
YDR340WYDR340W UBP14P38237 781 aaKnown RBP5.52□□□□□ -1.53
YDR340WYDR340W KIC1P38692 1080 aa5.52□□□□□ -1.53
YDR340WYDR340W BIM1P40013 344 aa5.52□□□□□ -1.53
YDR340WYDR340W YJL007CP47080 104 aa5.52□□□□□ -1.53
YDR340WYDR340W CSN12P47130 423 aa5.52□□□□□ -1.53
YDR340WYDR340W PIB1Q06651 286 aa5.52□□□□□ -1.53
YDR340WYDR340W LDB19Q12502 818 aa5.52□□□□□ -1.53
YDR340WYDR340W GLN1P32288 370 aaKnown RBP5.49□□□□□ -1.53
YDR340WYDR340W ATG32P40458 529 aa5.49□□□□□ -1.53
YDR340WYDR340W ULI1P43604 169 aa5.49□□□□□ -1.53
YDR340WYDR340W YLR326WQ06170 240 aaKnown RBP5.49□□□□□ -1.53
YDR340WYDR340W NOP8Q08287 484 aaPredicted RBP5.49□□□□□ -1.53
YDR340WYDR340W PSE1P32337 1089 aaKnown RBP5.48□□□□□ -1.53
YDR340WYDR340W RPL34BP40525 121 aaKnown RBP5.48□□□□□ -1.53
YDR340WYDR340W ATH1P48016 1211 aa5.48□□□□□ -1.53
YDR340WYDR340W SSA4P22202 642 aaKnown RBP5.47□□□□□ -1.53
YDR340WYDR340W IOC2Q12072 812 aa5.47□□□□□ -1.53
YDR340WYDR340W GRE2Q12068 342 aaKnown RBP5.46□□□□□ -1.54
YDR340WYDR340W BMT6Q12291 365 aa5.46□□□□□ -1.54
YDR340WYDR340W RAD54P32863 898 aa5.45□□□□□ -1.54
YDR340WYDR340W AIM44Q99299 758 aa5.45□□□□□ -1.54
YDR340WYDR340W VMA1P17255 1071 aaKnown RBP5.44□□□□□ -1.54
YDR340WYDR340W GUT1P32190 709 aa5.44□□□□□ -1.54
YDR340WYDR340W TEA1P47988 759 aa5.44□□□□□ -1.54
YDR340WYDR340W ERG12P07277 443 aa5.43□□□□□ -1.54
YDR340WYDR340W TIF1P10081 395 aaKnown RBP5.43□□□□□ -1.54
YDR340WYDR340W PCS60P38137 543 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
YDR340WYDR340W YGR273CP53329 174 aa5.43□□□□□ -1.54
YDR340WYDR340W TYW1Q08960 810 aaKnown RBP5.43□□□□□ -1.54
YDR340WYDR340W KEX1P09620 729 aa5.42□□□□□ -1.54
YDR340WYDR340W CPS1P27614 576 aa5.42□□□□□ -1.54
YDR340WYDR340W KTR1P27810 393 aaKnown RBP5.42□□□□□ -1.54
YDR340WYDR340W YBL036CP38197 257 aa5.42□□□□□ -1.54
YDR340WYDR340W YPR204WQ08995 1032 aa5.41□□□□□ -1.54
YDR340WYDR340W MSB4Q12317 492 aa5.41□□□□□ -1.54
YDR340WYDR340W RTG2P32608 588 aaKnown RBP5.39□□□□□ -1.55
YDR340WYDR340W SLD2P34252 453 aa5.39□□□□□ -1.55
YDR340WYDR340W EAP1P36041 632 aaKnown RBP5.39□□□□□ -1.55
YDR340WYDR340W ORC6P38826 435 aa5.39□□□□□ -1.55
YDR340WYDR340W RPL34AP87262 121 aaPredicted RBP5.39□□□□□ -1.55
YDR340WYDR340W TTI1P36097 1038 aa5.38□□□□□ -1.55
YDR340WYDR340W SET4P42948 560 aa5.38□□□□□ -1.55
YDR340WYDR340W BIO2P32451 375 aa5.37□□□□□ -1.55
YDR340WYDR340W RTG1P32607 177 aa5.37□□□□□ -1.55
YDR340WYDR340W SOL3P38858 249 aa5.37□□□□□ -1.55
YDR340WYDR340W YOL036WQ08206 761 aa5.37□□□□□ -1.55
YDR340WYDR340W TRP5P00931 707 aaKnown RBP5.36□□□□□ -1.55
YDR340WYDR340W RGR1P19263 1082 aa5.36□□□□□ -1.55
YDR340WYDR340W YNL108CP53929 270 aa5.36□□□□□ -1.55
YDR340WYDR340W GYP5Q12344 894 aa5.36□□□□□ -1.55
YDR340WYDR340W CLB5P30283 435 aa5.35□□□□□ -1.55
YDR340WYDR340W NOP7P53261 605 aaKnown RBP5.35□□□□□ -1.55
YDR340WYDR340W PKH3Q03306 898 aaPredicted RBP5.35□□□□□ -1.55
YDR340WYDR340W YMR196WQ04336 1088 aa5.35□□□□□ -1.55
YDR340WYDR340W NOB1Q08444 459 aaKnown RBP5.35□□□□□ -1.55
YDR340WYDR340W CDC3P32457 520 aaKnown RBP5.34□□□□□ -1.55
YDR340WYDR340W MRX12P47084 519 aa5.34□□□□□ -1.55
YDR340WYDR340W FPK1P53739 893 aa5.34□□□□□ -1.55
YDR340WYDR340W NIS1P53939 407 aa5.34□□□□□ -1.55
YDR340WYDR340W SAM3Q08986 587 aa5.34□□□□□ -1.55
YDR340WYDR340W RAD59Q12223 238 aa5.34□□□□□ -1.55
YDR340WYDR340W MMP1Q12372 583 aa5.34□□□□□ -1.55
YDR340WYDR340W ESS1P22696 170 aa5.33□□□□□ -1.56
YDR340WYDR340W CSE4P36012 229 aa5.33□□□□□ -1.56
YDR340WYDR340W MVP1P40959 511 aaKnown RBP5.33□□□□□ -1.56
YDR340WYDR340W HST2P53686 357 aa5.33□□□□□ -1.56
YDR340WYDR340W NCR1Q12200 1170 aa5.33□□□□□ -1.56
YDR340WYDR340W SCJ1P25303 377 aa5.32□□□□□ -1.56
YDR340WYDR340W ORC1P54784 914 aaPredicted RBP5.32□□□□□ -1.56
YDR340WYDR340W DCW1P36091 449 aa5.31□□□□□ -1.56
YDR340WYDR340W ARG8P18544 423 aa5.3□□□□□ -1.56
YDR340WYDR340W SNU71P53207 620 aaKnown RBP5.3□□□□□ -1.56
YDR340WYDR340W YNL035CP53962 389 aaKnown RBP5.3□□□□□ -1.56
YDR340WYDR340W YML083CQ04526 418 aa5.3□□□□□ -1.56
YDR340WYDR340W YPR109WQ06104 294 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 129.6 ms