RNA–Protein interactions for RNA: YDR251W

PAM1, Transcript of Essential protein of unknown function, yeastyeast

Gene PAM1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAM1YDR251W ATH1P48016 1211 aa6.78□□□□□ -1.32
PAM1YDR251W YNL035CP53962 389 aaKnown RBP6.77□□□□□ -1.32
PAM1YDR251W YEL023CP39992 682 aa6.77□□□□□ -1.33
PAM1YDR251W NOP53Q12080 455 aaKnown RBP6.76□□□□□ -1.33
PAM1YDR251W SOL3P38858 249 aa6.75□□□□□ -1.33
PAM1YDR251W NST1P53935 1240 aa6.75□□□□□ -1.33
PAM1YDR251W SEC61P32915 480 aa6.73□□□□□ -1.33
PAM1YDR251W PTC4P38089 393 aa6.73□□□□□ -1.33
PAM1YDR251W JIP4Q03361 876 aa6.73□□□□□ -1.33
PAM1YDR251W NCR1Q12200 1170 aa6.73□□□□□ -1.33
PAM1YDR251W DMA1P38823 416 aa6.71□□□□□ -1.34
PAM1YDR251W YJL171CP46992 396 aa6.69□□□□□ -1.34
PAM1YDR251W YGR273CP53329 174 aa6.67□□□□□ -1.34
PAM1YDR251W BMT6Q12291 365 aa6.67□□□□□ -1.34
PAM1YDR251W ILV3P39522 585 aaKnown RBP6.66□□□□□ -1.34
PAM1YDR251W MPH3P0CE00 602 aa6.64□□□□□ -1.35
PAM1YDR251W AI4P03878 556 aa6.63□□□□□ -1.35
PAM1YDR251W PML39Q03760 334 aa6.62□□□□□ -1.35
PAM1YDR251W YDL129WQ07555 291 aa6.62□□□□□ -1.35
PAM1YDR251W SAP30P38429 201 aa6.62□□□□□ -1.35
PAM1YDR251W TFG1P41895 735 aaPredicted RBP6.62□□□□□ -1.35
PAM1YDR251W YPR148CQ06523 435 aa6.62□□□□□ -1.35
PAM1YDR251W MID1P41821 548 aa6.6□□□□□ -1.35
PAM1YDR251W YDR344CQ05510 147 aa6.59□□□□□ -1.35
PAM1YDR251W UBP14P38237 781 aaKnown RBP6.58□□□□□ -1.36
PAM1YDR251W IFH1P39520 1085 aa6.58□□□□□ -1.36
PAM1YDR251W KEX1P09620 729 aa6.57□□□□□ -1.36
PAM1YDR251W YLR326WQ06170 240 aaKnown RBP6.57□□□□□ -1.36
PAM1YDR251W VHR2P40041 505 aa6.56□□□□□ -1.36
PAM1YDR251W VPS70P47161 811 aa6.55□□□□□ -1.36
PAM1YDR251W SLI15P38283 698 aa6.54□□□□□ -1.36
PAM1YDR251W SAS10Q12136 610 aaPredicted RBP6.52□□□□□ -1.37
PAM1YDR251W YDR090CQ03193 310 aa6.52□□□□□ -1.37
PAM1YDR251W PCS60P38137 543 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
PAM1YDR251W MON2P48563 1636 aaPredicted RBP6.5□□□□□ -1.37
PAM1YDR251W PRE3P38624 215 aa6.49□□□□□ -1.37
PAM1YDR251W PEX29Q03370 554 aa6.49□□□□□ -1.37
PAM1YDR251W REF2P42073 533 aaPredicted RBP6.49□□□□□ -1.37
PAM1YDR251W MPC54Q08550 464 aa6.49□□□□□ -1.37
PAM1YDR251W CHL1P22516 861 aaPredicted RBP6.47□□□□□ -1.37
PAM1YDR251W ARH1P48360 493 aa6.47□□□□□ -1.37
PAM1YDR251W RAD54P32863 898 aa6.46□□□□□ -1.38
PAM1YDR251W CDC73Q06697 393 aa6.44□□□□□ -1.38
PAM1YDR251W ELP4Q02884 456 aaKnown RBP6.44□□□□□ -1.38
PAM1YDR251W DPL1Q05567 589 aa6.43□□□□□ -1.38
PAM1YDR251W NMA111P53920 997 aa6.42□□□□□ -1.38
PAM1YDR251W HAP5Q02516 242 aa6.41□□□□□ -1.38
PAM1YDR251W COX6P00427 148 aa6.41□□□□□ -1.38
PAM1YDR251W CKB1P43639 278 aa6.41□□□□□ -1.38
PAM1YDR251W RQC2Q12532 1038 aaKnown RBP6.39□□□□□ -1.39
PAM1YDR251W PBS2P08018 668 aa6.38□□□□□ -1.39
PAM1YDR251W KIC1P38692 1080 aa6.38□□□□□ -1.39
PAM1YDR251W MAK21Q12176 1025 aaKnown RBP6.37□□□□□ -1.39
PAM1YDR251W SPT23P35210 1082 aa6.37□□□□□ -1.39
PAM1YDR251W BNI4P53858 892 aa6.36□□□□□ -1.39
PAM1YDR251W GAP1P19145 602 aaPredicted RBP6.36□□□□□ -1.39
PAM1YDR251W ISU2Q12056 156 aa6.36□□□□□ -1.39
PAM1YDR251W ORC6P38826 435 aa6.35□□□□□ -1.39
PAM1YDR251W BCK2P33306 851 aa6.35□□□□□ -1.39
PAM1YDR251W VRP1P37370 817 aa6.33□□□□□ -1.4
PAM1YDR251W DSF2P38213 736 aa6.33□□□□□ -1.4
PAM1YDR251W INO80P53115 1489 aa6.33□□□□□ -1.4
PAM1YDR251W RAM1P22007 431 aa6.32□□□□□ -1.4
PAM1YDR251W YPR015CQ12531 247 aa6.32□□□□□ -1.4
PAM1YDR251W PDR1P12383 1068 aa6.31□□□□□ -1.4
PAM1YDR251W PTC2P39966 464 aaKnown RBP6.31□□□□□ -1.4
PAM1YDR251W YML082WQ04533 649 aaKnown RBP6.31□□□□□ -1.4
PAM1YDR251W MAM3Q12296 706 aa6.29□□□□□ -1.4
PAM1YDR251W RPP1BP10622 106 aaKnown RBP6.28□□□□□ -1.4
PAM1YDR251W SPB4P25808 606 aaPredicted RBP6.28□□□□□ -1.4
PAM1YDR251W MVP1P40959 511 aaKnown RBP6.28□□□□□ -1.4
PAM1YDR251W CSC1Q06538 782 aa6.28□□□□□ -1.4
PAM1YDR251W RGR1P19263 1082 aa6.26□□□□□ -1.41
PAM1YDR251W IES2P40154 320 aa6.26□□□□□ -1.41
PAM1YDR251W NUP42P49686 430 aaKnown RBP6.26□□□□□ -1.41
PAM1YDR251W YRR1Q12172 810 aa6.26□□□□□ -1.41
PAM1YDR251W TUM1Q08686 304 aaKnown RBP6.26□□□□□ -1.41
PAM1YDR251W TFB4Q12004 338 aa6.26□□□□□ -1.41
PAM1YDR251W TCB3Q03640 1545 aaKnown RBP6.25□□□□□ -1.41
PAM1YDR251W XDJ1P39102 459 aa6.24□□□□□ -1.41
PAM1YDR251W PEX21P50091 288 aa6.24□□□□□ -1.41
PAM1YDR251W DIT2P21595 489 aa6.23□□□□□ -1.41
PAM1YDR251W PSE1P32337 1089 aaKnown RBP6.21□□□□□ -1.41
PAM1YDR251W YPR109WQ06104 294 aa6.21□□□□□ -1.41
PAM1YDR251W STR2P47164 639 aa6.21□□□□□ -1.42
PAM1YDR251W NUD1P32336 851 aa6.19□□□□□ -1.42
PAM1YDR251W ISM1P48526 1002 aa6.19□□□□□ -1.42
PAM1YDR251W BUD20Q08004 166 aaPredicted RBP6.19□□□□□ -1.42
PAM1YDR251W TY1B-DR4Q07793 1604 aa6.18□□□□□ -1.42
PAM1YDR251W TY1A-DR4O74302 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-HP0C2I4 478 aaKnown RBP6.14□□□□□ -1.43
PAM1YDR251W TY1A-AP0CX57 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-PR1P0CX58 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-ORP0CX59 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-PR2P0CX60 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-DR5P0CX65 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-ER2P0CX66 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-GR3P0CX67 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-LR1P0CX68 440 aa6.14□□□□□ -1.43
PAM1YDR251W TY1A-MR2P0CX69 440 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms