RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeastyeast

Gene UPS3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS3YDR185C NST1P53935 1240 aa8.91□□□□□ -0.98
UPS3YDR185C REF2P42073 533 aaPredicted RBP8.9□□□□□ -0.98
UPS3YDR185C BUD31P25337 157 aaPredicted RBP8.89□□□□□ -0.99
UPS3YDR185C SPB4P25808 606 aaPredicted RBP8.89□□□□□ -0.99
UPS3YDR185C YGR273CP53329 174 aa8.89□□□□□ -0.99
UPS3YDR185C HTA1P04911 132 aaKnown RBP8.88□□□□□ -0.99
UPS3YDR185C HTA2P04912 132 aa8.88□□□□□ -0.99
UPS3YDR185C RLF2Q12495 606 aa8.88□□□□□ -0.99
UPS3YDR185C PBS2P08018 668 aa8.87□□□□□ -0.99
UPS3YDR185C TIF11P38912 153 aaKnown RBP8.87□□□□□ -0.99
UPS3YDR185C EAP1P36041 632 aaKnown RBP8.86□□□□□ -0.99
UPS3YDR185C DSF2P38213 736 aa8.86□□□□□ -0.99
UPS3YDR185C TRP5P00931 707 aaKnown RBP8.85□□□□□ -0.99
UPS3YDR185C UBP14P38237 781 aaKnown RBP8.85□□□□□ -0.99
UPS3YDR185C SPP1Q03012 353 aa8.85□□□□□ -0.99
UPS3YDR185C VHR2P40041 505 aa8.84□□□□□ -0.99
UPS3YDR185C YLR326WQ06170 240 aaKnown RBP8.84□□□□□ -0.99
UPS3YDR185C ULI1P43604 169 aa8.82□□□□□ -1
UPS3YDR185C YDR090CQ03193 310 aa8.82□□□□□ -1
UPS3YDR185C ILV3P39522 585 aaKnown RBP8.81□□□□□ -1
UPS3YDR185C IOC2Q12072 812 aa8.81□□□□□ -1
UPS3YDR185C YEL023CP39992 682 aa8.8□□□□□ -1
UPS3YDR185C KEX1P09620 729 aa8.79□□□□□ -1
UPS3YDR185C MAK21Q12176 1025 aaKnown RBP8.79□□□□□ -1
UPS3YDR185C COX6P00427 148 aa8.77□□□□□ -1.01
UPS3YDR185C AI4P03878 556 aa8.77□□□□□ -1.01
UPS3YDR185C MPH3P0CE00 602 aa8.77□□□□□ -1.01
UPS3YDR185C MAM3Q12296 706 aa8.75□□□□□ -1.01
UPS3YDR185C DAN4P47179 1161 aa8.74□□□□□ -1.01
UPS3YDR185C JIP4Q03361 876 aa8.74□□□□□ -1.01
UPS3YDR185C PTC4P38089 393 aa8.73□□□□□ -1.01
UPS3YDR185C PCS60P38137 543 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
UPS3YDR185C IES2P40154 320 aa8.73□□□□□ -1.01
UPS3YDR185C RAD54P32863 898 aa8.72□□□□□ -1.01
UPS3YDR185C LDB19Q12502 818 aa8.72□□□□□ -1.01
UPS3YDR185C NUP42P49686 430 aaKnown RBP8.7□□□□□ -1.02
UPS3YDR185C YNL035CP53962 389 aaKnown RBP8.7□□□□□ -1.02
UPS3YDR185C RTG1P32607 177 aa8.67□□□□□ -1.02
UPS3YDR185C SLI15P38283 698 aa8.65□□□□□ -1.02
UPS3YDR185C KIC1P38692 1080 aa8.65□□□□□ -1.02
UPS3YDR185C DIT2P21595 489 aa8.64□□□□□ -1.03
UPS3YDR185C SEC61P32915 480 aa8.64□□□□□ -1.03
UPS3YDR185C FKH1P40466 484 aa8.64□□□□□ -1.03
UPS3YDR185C YNR021WP53723 404 aaKnown RBP8.64□□□□□ -1.03
UPS3YDR185C KIN1P13185 1064 aa8.63□□□□□ -1.03
UPS3YDR185C HGH1P48362 394 aaKnown RBP8.63□□□□□ -1.03
UPS3YDR185C ORC6P38826 435 aa8.62□□□□□ -1.03
UPS3YDR185C PML39Q03760 334 aa8.59□□□□□ -1.03
UPS3YDR185C MID1P41821 548 aa8.58□□□□□ -1.04
UPS3YDR185C GLC3P32775 704 aa8.57□□□□□ -1.04
UPS3YDR185C GAP1P19145 602 aaPredicted RBP8.56□□□□□ -1.04
UPS3YDR185C NCR1Q12200 1170 aa8.56□□□□□ -1.04
UPS3YDR185C AIR2Q12476 344 aaKnown RBP8.56□□□□□ -1.04
UPS3YDR185C PSE1P32337 1089 aaKnown RBP8.55□□□□□ -1.04
UPS3YDR185C CDC73Q06697 393 aa8.55□□□□□ -1.04
UPS3YDR185C YDL129WQ07555 291 aa8.53□□□□□ -1.04
UPS3YDR185C MPC54Q08550 464 aa8.53□□□□□ -1.04
UPS3YDR185C AIM7Q12156 149 aa8.53□□□□□ -1.04
UPS3YDR185C SIS1P25294 352 aaKnown RBP8.5□□□□□ -1.05
UPS3YDR185C TFG1P41895 735 aaPredicted RBP8.49□□□□□ -1.05
UPS3YDR185C DPL1Q05567 589 aa8.49□□□□□ -1.05
UPS3YDR185C RGR1P19263 1082 aa8.48□□□□□ -1.05
UPS3YDR185C MVP1P40959 511 aaKnown RBP8.48□□□□□ -1.05
UPS3YDR185C CSC1Q06538 782 aa8.48□□□□□ -1.05
UPS3YDR185C PEX29Q03370 554 aa8.47□□□□□ -1.05
UPS3YDR185C RPP1BP10622 106 aaKnown RBP8.46□□□□□ -1.06
UPS3YDR185C SAP30P38429 201 aa8.45□□□□□ -1.06
UPS3YDR185C YDR344CQ05510 147 aa8.45□□□□□ -1.06
UPS3YDR185C ATF2P53296 535 aa8.44□□□□□ -1.06
UPS3YDR185C TFB4Q12004 338 aa8.44□□□□□ -1.06
UPS3YDR185C GUA1P38625 525 aaKnown RBP8.41□□□□□ -1.06
UPS3YDR185C NMA111P53920 997 aa8.41□□□□□ -1.06
UPS3YDR185C ISU2Q12056 156 aa8.4□□□□□ -1.06
UPS3YDR185C ARH1P48360 493 aa8.39□□□□□ -1.07
UPS3YDR185C YPR109WQ06104 294 aa8.39□□□□□ -1.07
UPS3YDR185C CLB5P30283 435 aa8.38□□□□□ -1.07
UPS3YDR185C TEA1P47988 759 aa8.38□□□□□ -1.07
UPS3YDR185C PEX21P50091 288 aa8.37□□□□□ -1.07
UPS3YDR185C HAP5Q02516 242 aa8.37□□□□□ -1.07
UPS3YDR185C BMT6Q12291 365 aa8.37□□□□□ -1.07
UPS3YDR185C HPC2Q01448 625 aa8.36□□□□□ -1.07
UPS3YDR185C TUM1Q08686 304 aaKnown RBP8.36□□□□□ -1.07
UPS3YDR185C YRR1Q12172 810 aa8.35□□□□□ -1.07
UPS3YDR185C YML020WQ03722 664 aa8.34□□□□□ -1.07
UPS3YDR185C YJL171CP46992 396 aa8.33□□□□□ -1.08
UPS3YDR185C NIS1P53939 407 aa8.32□□□□□ -1.08
UPS3YDR185C BNI4P53858 892 aa8.31□□□□□ -1.08
UPS3YDR185C TFB3Q03290 321 aa8.31□□□□□ -1.08
UPS3YDR185C PDR1P12383 1068 aa8.3□□□□□ -1.08
UPS3YDR185C ELP4Q02884 456 aaKnown RBP8.3□□□□□ -1.08
UPS3YDR185C AIM44Q99299 758 aa8.3□□□□□ -1.08
UPS3YDR185C SSA1P10591 642 aaKnown RBP8.29□□□□□ -1.08
UPS3YDR185C PRE3P38624 215 aa8.29□□□□□ -1.08
UPS3YDR185C RAM1P22007 431 aa8.28□□□□□ -1.08
UPS3YDR185C BRL1P38770 471 aa8.28□□□□□ -1.08
UPS3YDR185C SIT4P20604 311 aa8.27□□□□□ -1.09
UPS3YDR185C KTR1P27810 393 aaKnown RBP8.27□□□□□ -1.09
UPS3YDR185C GEF1P37020 779 aa8.27□□□□□ -1.09
UPS3YDR185C FPK1P53739 893 aa8.27□□□□□ -1.09
UPS3YDR185C NUD1P32336 851 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms