RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM10	YDR041W	IFH1	P39520	1085 aa		7.76	□□□□□ -1.17
RSM10	YDR041W	MSB4	Q12317	492 aa		7.76	□□□□□ -1.17
RSM10	YDR041W	TIF11	P38912	153 aa	Known RBP	7.75	□□□□□ -1.17
RSM10	YDR041W	TRP5	P00931	707 aa	Known RBP	7.73	□□□□□ -1.17
RSM10	YDR041W	ULI1	P43604	169 aa		7.73	□□□□□ -1.17
RSM10	YDR041W	HTA1	P04911	132 aa	Known RBP	7.71	□□□□□ -1.18
RSM10	YDR041W	HTA2	P04912	132 aa		7.71	□□□□□ -1.18
RSM10	YDR041W	ABP1	P15891	592 aa	Known RBP	7.7	□□□□□ -1.18
RSM10	YDR041W	CKB1	P43639	278 aa		7.7	□□□□□ -1.18
RSM10	YDR041W	NST1	P53935	1240 aa		7.7	□□□□□ -1.18
RSM10	YDR041W	IOC2	Q12072	812 aa		7.7	□□□□□ -1.18
RSM10	YDR041W	NAP1	P25293	417 aa	Known RBP	7.69	□□□□□ -1.18
RSM10	YDR041W	YGR273C	P53329	174 aa		7.69	□□□□□ -1.18
RSM10	YDR041W	VHR2	P40041	505 aa		7.68	□□□□□ -1.18
RSM10	YDR041W	EAP1	P36041	632 aa	Known RBP	7.67	□□□□□ -1.18
RSM10	YDR041W	ILV3	P39522	585 aa	Known RBP	7.66	□□□□□ -1.18
RSM10	YDR041W	YEL023C	P39992	682 aa		7.66	□□□□□ -1.18
RSM10	YDR041W	REF2	P42073	533 aa	Predicted RBP	7.66	□□□□□ -1.18
RSM10	YDR041W	UBP14	P38237	781 aa	Known RBP	7.65	□□□□□ -1.18
RSM10	YDR041W	LDB19	Q12502	818 aa		7.65	□□□□□ -1.18
RSM10	YDR041W	SPB4	P25808	606 aa	Predicted RBP	7.64	□□□□□ -1.19
RSM10	YDR041W	YLR326W	Q06170	240 aa	Known RBP	7.64	□□□□□ -1.19
RSM10	YDR041W	PBS2	P08018	668 aa		7.63	□□□□□ -1.19
RSM10	YDR041W	KEX1	P09620	729 aa		7.61	□□□□□ -1.19
RSM10	YDR041W	YDR090C	Q03193	310 aa		7.61	□□□□□ -1.19
RSM10	YDR041W	DAN4	P47179	1161 aa		7.6	□□□□□ -1.19
RSM10	YDR041W	MPH3	P0CE00	602 aa		7.59	□□□□□ -1.19
RSM10	YDR041W	RTG1	P32607	177 aa		7.59	□□□□□ -1.19
RSM10	YDR041W	PTC4	P38089	393 aa		7.59	□□□□□ -1.19
RSM10	YDR041W	YNL035C	P53962	389 aa	Known RBP	7.58	□□□□□ -1.2
RSM10	YDR041W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.57	□□□□□ -1.2	not detected
RSM10	YDR041W	DSF2	P38213	736 aa		7.57	□□□□□ -1.2
RSM10	YDR041W	HGH1	P48362	394 aa	Known RBP	7.57	□□□□□ -1.2
RSM10	YDR041W	AI4	P03878	556 aa		7.56	□□□□□ -1.2
RSM10	YDR041W	SIS1	P25294	352 aa	Known RBP	7.56	□□□□□ -1.2
RSM10	YDR041W	JIP4	Q03361	876 aa		7.56	□□□□□ -1.2
RSM10	YDR041W	COX6	P00427	148 aa		7.53	□□□□□ -1.2
RSM10	YDR041W	RAD54	P32863	898 aa		7.53	□□□□□ -1.2
RSM10	YDR041W	FKH1	P40466	484 aa		7.53	□□□□□ -1.2
RSM10	YDR041W	MID1	P41821	548 aa		7.52	□□□□□ -1.21
RSM10	YDR041W	SLI15	P38283	698 aa		7.51	□□□□□ -1.21
RSM10	YDR041W	IES2	P40154	320 aa		7.51	□□□□□ -1.21
RSM10	YDR041W	MAM3	Q12296	706 aa		7.51	□□□□□ -1.21
RSM10	YDR041W	SEC61	P32915	480 aa		7.5	□□□□□ -1.21
RSM10	YDR041W	PML39	Q03760	334 aa		7.5	□□□□□ -1.21
RSM10	YDR041W	IOC4	Q04213	475 aa		7.5	□□□□□ -1.21
RSM10	YDR041W	NCR1	Q12200	1170 aa		7.5	□□□□□ -1.21
RSM10	YDR041W	AIR2	Q12476	344 aa	Known RBP	7.5	□□□□□ -1.21
RSM10	YDR041W	ORC1	P54784	914 aa	Predicted RBP	7.49	□□□□□ -1.21
RSM10	YDR041W	MAK21	Q12176	1025 aa	Known RBP	7.49	□□□□□ -1.21
RSM10	YDR041W	KIC1	P38692	1080 aa		7.48	□□□□□ -1.21
RSM10	YDR041W	DIT2	P21595	489 aa		7.47	□□□□□ -1.21
RSM10	YDR041W	NUP42	P49686	430 aa	Known RBP	7.47	□□□□□ -1.21
RSM10	YDR041W	CDC73	Q06697	393 aa		7.45	□□□□□ -1.22
RSM10	YDR041W	YML020W	Q03722	664 aa		7.44	□□□□□ -1.22
RSM10	YDR041W	YDR344C	Q05510	147 aa		7.44	□□□□□ -1.22
RSM10	YDR041W	YDL129W	Q07555	291 aa		7.42	□□□□□ -1.22
RSM10	YDR041W	SAP30	P38429	201 aa		7.41	□□□□□ -1.22
RSM10	YDR041W	ORC6	P38826	435 aa		7.41	□□□□□ -1.22
RSM10	YDR041W	TFG1	P41895	735 aa	Predicted RBP	7.41	□□□□□ -1.22
RSM10	YDR041W	KIN1	P13185	1064 aa		7.4	□□□□□ -1.22
RSM10	YDR041W	PEX29	Q03370	554 aa		7.4	□□□□□ -1.22
RSM10	YDR041W	MPC54	Q08550	464 aa		7.4	□□□□□ -1.22
RSM10	YDR041W	NOP8	Q08287	484 aa	Predicted RBP	7.39	□□□□□ -1.23
RSM10	YDR041W	GLC3	P32775	704 aa		7.38	□□□□□ -1.23
RSM10	YDR041W	YNR021W	P53723	404 aa	Known RBP	7.35	□□□□□ -1.23
RSM10	YDR041W	DPL1	Q05567	589 aa		7.35	□□□□□ -1.23
RSM10	YDR041W	GAP1	P19145	602 aa	Predicted RBP	7.34	□□□□□ -1.23
RSM10	YDR041W	YJL171C	P46992	396 aa		7.34	□□□□□ -1.23
RSM10	YDR041W	NOP7	P53261	605 aa	Known RBP	7.34	□□□□□ -1.23
RSM10	YDR041W	RGR1	P19263	1082 aa		7.33	□□□□□ -1.24
RSM10	YDR041W	SLX8	P40072	274 aa		7.33	□□□□□ -1.24
RSM10	YDR041W	NMA111	P53920	997 aa		7.33	□□□□□ -1.24
RSM10	YDR041W	BMT6	Q12291	365 aa		7.33	□□□□□ -1.24
RSM10	YDR041W	SSA1	P10591	642 aa	Known RBP	7.32	□□□□□ -1.24
RSM10	YDR041W	MVP1	P40959	511 aa	Known RBP	7.32	□□□□□ -1.24
RSM10	YDR041W	PSE1	P32337	1089 aa	Known RBP	7.31	□□□□□ -1.24
RSM10	YDR041W	GEF1	P37020	779 aa		7.3	□□□□□ -1.24
RSM10	YDR041W	AIM7	Q12156	149 aa		7.3	□□□□□ -1.24
RSM10	YDR041W	YPR109W	Q06104	294 aa		7.28	□□□□□ -1.24
RSM10	YDR041W	CSC1	Q06538	782 aa		7.28	□□□□□ -1.24
RSM10	YDR041W	ARH1	P48360	493 aa		7.27	□□□□□ -1.25
RSM10	YDR041W	ATF2	P53296	535 aa		7.27	□□□□□ -1.25
RSM10	YDR041W	TUM1	Q08686	304 aa	Known RBP	7.27	□□□□□ -1.25
RSM10	YDR041W	ISU2	Q12056	156 aa		7.27	□□□□□ -1.25
RSM10	YDR041W	RPP1B	P10622	106 aa	Known RBP	7.26	□□□□□ -1.25
RSM10	YDR041W	PDR1	P12383	1068 aa		7.26	□□□□□ -1.25
RSM10	YDR041W	PEX21	P50091	288 aa		7.26	□□□□□ -1.25
RSM10	YDR041W	HAP5	Q02516	242 aa		7.26	□□□□□ -1.25
RSM10	YDR041W	ELP4	Q02884	456 aa	Known RBP	7.26	□□□□□ -1.25
RSM10	YDR041W	YRR1	Q12172	810 aa		7.26	□□□□□ -1.25
RSM10	YDR041W	TFB4	Q12004	338 aa		7.24	□□□□□ -1.25
RSM10	YDR041W	PRE3	P38624	215 aa		7.21	□□□□□ -1.26
RSM10	YDR041W	TEA1	P47988	759 aa		7.21	□□□□□ -1.26
RSM10	YDR041W	SNU71	P53207	620 aa	Known RBP	7.21	□□□□□ -1.26
RSM10	YDR041W	TOP1	P04786	769 aa		7.2	□□□□□ -1.26
RSM10	YDR041W	SLD2	P34252	453 aa		7.19	□□□□□ -1.26
RSM10	YDR041W	GUA1	P38625	525 aa	Known RBP	7.18	□□□□□ -1.26
RSM10	YDR041W	NIS1	P53939	407 aa		7.18	□□□□□ -1.26
RSM10	YDR041W	HPC2	Q01448	625 aa		7.18	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms