RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM10YDR041W MTC1P47018 478 aaKnown RBP12.91□□□□□ -0.34
RSM10YDR041W DRS1P32892 752 aaKnown RBP12.81□□□□□ -0.36
RSM10YDR041W BFR2Q06631 534 aaKnown RBP10.98□□□□□ -0.65
RSM10YDR041W DIP2Q12220 943 aaPredicted RBP10.97□□□□□ -0.65
RSM10YDR041W FAP1P53971 965 aa10.83□□□□□ -0.68
RSM10YDR041W AVT3P36062 692 aa10.77□□□□□ -0.69
RSM10YDR041W ISW2Q08773 1120 aa10.49□□□□□ -0.73
RSM10YDR041W PRI1P10363 409 aa10.48□□□□□ -0.73
RSM10YDR041W RPG1P38249 964 aaKnown RBP10.44□□□□□ -0.74
RSM10YDR041W RSE1Q04693 1361 aaKnown RBP10.36□□□□□ -0.75
RSM10YDR041W AAD16Q02895 342 aa10.31□□□□□ -0.76
RSM10YDR041W TFA1P36100 482 aa10.2□□□□□ -0.78
RSM10YDR041W PRY3P47033 881 aa10.17□□□□□ -0.78
RSM10YDR041W RPL17AP05740 184 aaKnown RBP10.04□□□□□ -0.8
RSM10YDR041W RPL17BP46990 184 aaKnown RBP10.04□□□□□ -0.8
RSM10YDR041W TSR3Q12094 313 aaKnown RBP10.01□□□□□ -0.81
RSM10YDR041W RQC2Q12532 1038 aaKnown RBP10□□□□□ -0.81
RSM10YDR041W REB1P21538 810 aa9.88□□□□□ -0.83
RSM10YDR041W YCK3P39962 524 aa9.7□□□□□ -0.86
RSM10YDR041W SPT21P35209 758 aa9.65□□□□□ -0.86
RSM10YDR041W MRPL32P25348 183 aa9.52□□□□□ -0.89
RSM10YDR041W HAA1Q12753 694 aaKnown RBP9.48□□□□□ -0.89
RSM10YDR041W RIM101P33400 625 aa9.45□□□□□ -0.9
RSM10YDR041W TAF7Q05021 590 aa9.45□□□□□ -0.9
RSM10YDR041W YKR023WP36119 530 aaKnown RBP9.41□□□□□ -0.9
RSM10YDR041W CDC27P38042 758 aa9.27□□□□□ -0.93
RSM10YDR041W HOP09932 586 aa9.24□□□□□ -0.93
RSM10YDR041W DCD1P06773 312 aa9.22□□□□□ -0.93
RSM10YDR041W OXP1P28273 1286 aa9.22□□□□□ -0.93
RSM10YDR041W TFC8Q12308 588 aa9.18□□□□□ -0.94
RSM10YDR041W PTP3P40048 928 aa9.07□□□□□ -0.96
RSM10YDR041W YAH1Q12184 172 aaKnown RBP9.06□□□□□ -0.96
RSM10YDR041W YIL055CP40523 627 aaKnown RBP9□□□□□ -0.97
RSM10YDR041W SSP1P38871 571 aa8.94□□□□□ -0.98
RSM10YDR041W BCH2P36122 765 aa8.93□□□□□ -0.98
RSM10YDR041W YLR271WQ06152 274 aa8.91□□□□□ -0.98
RSM10YDR041W YGL015CP33199 130 aa8.9□□□□□ -0.98
RSM10YDR041W MAP2P38174 421 aaKnown RBP8.88□□□□□ -0.99
RSM10YDR041W RSM7P47150 247 aa8.88□□□□□ -0.99
RSM10YDR041W SCY1P53009 804 aa8.82□□□□□ -1
RSM10YDR041W DMA1P38823 416 aa8.81□□□□□ -1
RSM10YDR041W UBP10P53874 792 aaPredicted RBP8.78□□□□□ -1
RSM10YDR041W AI2P03876 854 aa8.76□□□□□ -1.01
RSM10YDR041W EPS1P40557 701 aa8.75□□□□□ -1.01
RSM10YDR041W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
RSM10YDR041W BDF1P35817 686 aa8.69□□□□□ -1.02
RSM10YDR041W LEO1P38439 464 aa8.69□□□□□ -1.02
RSM10YDR041W PSD2P53037 1138 aaKnown RBP8.66□□□□□ -1.02
RSM10YDR041W CST9Q06032 482 aa8.66□□□□□ -1.02
RSM10YDR041W BBC1P47068 1157 aa8.65□□□□□ -1.02
RSM10YDR041W SLX5P32828 619 aaKnown RBP8.61□□□□□ -1.03
RSM10YDR041W MGA2P40578 1113 aa8.61□□□□□ -1.03
RSM10YDR041W MRM1P25270 412 aa8.5□□□□□ -1.05
RSM10YDR041W RCR1P38212 213 aa8.41□□□□□ -1.06
RSM10YDR041W TIF4632P39936 914 aaKnown RBP8.39□□□□□ -1.07
RSM10YDR041W TGL3P40308 642 aa8.36□□□□□ -1.07
RSM10YDR041W RTG3P38165 486 aa8.31□□□□□ -1.08
RSM10YDR041W VPS29P38759 282 aa8.3□□□□□ -1.08
RSM10YDR041W RAM2P29703 316 aa8.29□□□□□ -1.08
RSM10YDR041W LEU3P08638 886 aa8.22□□□□□ -1.09
RSM10YDR041W PIB1Q06651 286 aa8.22□□□□□ -1.09
RSM10YDR041W YFR006WP43590 535 aa8.21□□□□□ -1.1
RSM10YDR041W STS1P38637 319 aa8.19□□□□□ -1.1
RSM10YDR041W YMR1P47147 688 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
RSM10YDR041W YOR238WQ08634 303 aa8.18□□□□□ -1.1
RSM10YDR041W DBP1P24784 617 aaKnown RBP8.17□□□□□ -1.1
RSM10YDR041W NSR1P27476 414 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
RSM10YDR041W YAP5P40574 245 aa8.17□□□□□ -1.1
RSM10YDR041W MST1P07236 462 aa8.1□□□□□ -1.11
RSM10YDR041W MAK11P20484 414 aaKnown RBP8.1□□□□□ -1.11
RSM10YDR041W COQ8P27697 501 aa8.03□□□□□ -1.12
RSM10YDR041W EDS1P38073 919 aa8.03□□□□□ -1.12
RSM10YDR041W MIF2P35201 549 aa8.02□□□□□ -1.13
RSM10YDR041W SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
RSM10YDR041W VMA1P17255 1071 aaKnown RBP8□□□□□ -1.13
RSM10YDR041W SAS10Q12136 610 aaPredicted RBP8□□□□□ -1.13
RSM10YDR041W GTT3P39996 337 aa7.97□□□□□ -1.13
RSM10YDR041W WSC3Q12215 556 aa7.95□□□□□ -1.14
RSM10YDR041W YBL029C-AQ3E756 94 aa7.93□□□□□ -1.14
RSM10YDR041W PTC3P34221 468 aaKnown RBP7.92□□□□□ -1.14
RSM10YDR041W DMA2P53924 522 aa7.92□□□□□ -1.14
RSM10YDR041W AIM44Q99299 758 aa7.9□□□□□ -1.14
RSM10YDR041W RPN1P38764 993 aaKnown RBP7.89□□□□□ -1.15
RSM10YDR041W SAM3Q08986 587 aa7.89□□□□□ -1.15
RSM10YDR041W SET4P42948 560 aa7.88□□□□□ -1.15
RSM10YDR041W YOL036WQ08206 761 aa7.88□□□□□ -1.15
RSM10YDR041W RLF2Q12495 606 aa7.88□□□□□ -1.15
RSM10YDR041W BUD31P25337 157 aaPredicted RBP7.85□□□□□ -1.15
RSM10YDR041W UBP9P39967 754 aa7.85□□□□□ -1.15
RSM10YDR041W VNX1P42839 908 aa7.85□□□□□ -1.15
RSM10YDR041W VPS70P47161 811 aa7.85□□□□□ -1.15
RSM10YDR041W YPR148CQ06523 435 aa7.84□□□□□ -1.15
RSM10YDR041W GYP5Q12344 894 aa7.84□□□□□ -1.15
RSM10YDR041W GRE2Q12068 342 aaKnown RBP7.82□□□□□ -1.16
RSM10YDR041W NOP53Q12080 455 aaKnown RBP7.82□□□□□ -1.16
RSM10YDR041W DCW1P36091 449 aa7.81□□□□□ -1.16
RSM10YDR041W ATH1P48016 1211 aa7.8□□□□□ -1.16
RSM10YDR041W GUT1P32190 709 aa7.77□□□□□ -1.17
RSM10YDR041W SPP1Q03012 353 aa7.77□□□□□ -1.17
RSM10YDR041W SOL3P38858 249 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms