RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W STS1P38637 319 aa9.54□□□□□ -0.88
SHM1YBR263W YOL036WQ08206 761 aa9.53□□□□□ -0.88
SHM1YBR263W SSK2P53599 1579 aa9.52□□□□□ -0.88
SHM1YBR263W EAP1P36041 632 aaKnown RBP9.52□□□□□ -0.89
SHM1YBR263W RCR1P38212 213 aa9.52□□□□□ -0.89
SHM1YBR263W SET4P42948 560 aa9.52□□□□□ -0.89
SHM1YBR263W VMA1P17255 1071 aaKnown RBP9.5□□□□□ -0.89
SHM1YBR263W SKI3P17883 1432 aaKnown RBP9.5□□□□□ -0.89
SHM1YBR263W TRP5P00931 707 aaKnown RBP9.47□□□□□ -0.89
SHM1YBR263W SAM3Q08986 587 aa9.47□□□□□ -0.89
SHM1YBR263W ESP1Q03018 1630 aa9.45□□□□□ -0.9
SHM1YBR263W BMT6Q12291 365 aa9.43□□□□□ -0.9
SHM1YBR263W RTG1P32607 177 aa9.42□□□□□ -0.9
SHM1YBR263W YNL035CP53962 389 aaKnown RBP9.37□□□□□ -0.91
SHM1YBR263W NCR1Q12200 1170 aa9.37□□□□□ -0.91
SHM1YBR263W YPK9Q12697 1472 aa9.35□□□□□ -0.91
SHM1YBR263W BPT1P14772 1559 aa9.34□□□□□ -0.91
SHM1YBR263W MYO2P19524 1574 aaKnown RBP9.34□□□□□ -0.91
SHM1YBR263W SEC61P32915 480 aa9.34□□□□□ -0.91
SHM1YBR263W SCC2Q04002 1493 aa9.31□□□□□ -0.92
SHM1YBR263W GYP5Q12344 894 aa9.31□□□□□ -0.92
SHM1YBR263W UFD4P33202 1483 aa9.3□□□□□ -0.92
SHM1YBR263W ABP1P15891 592 aaKnown RBP9.28□□□□□ -0.92
SHM1YBR263W RPO31P04051 1460 aa9.27□□□□□ -0.93
SHM1YBR263W DAN4P47179 1161 aa9.27□□□□□ -0.93
SHM1YBR263W DCW1P36091 449 aa9.24□□□□□ -0.93
SHM1YBR263W JIP4Q03361 876 aa9.24□□□□□ -0.93
SHM1YBR263W HTA1P04911 132 aaKnown RBP9.22□□□□□ -0.93
SHM1YBR263W HTA2P04912 132 aa9.22□□□□□ -0.93
SHM1YBR263W TFG1P41895 735 aaPredicted RBP9.21□□□□□ -0.93
SHM1YBR263W YCF1P39109 1515 aaKnown RBP9.2□□□□□ -0.94
SHM1YBR263W RAM2P29703 316 aa9.19□□□□□ -0.94
SHM1YBR263W POL1P13382 1468 aa9.18□□□□□ -0.94
SHM1YBR263W PTC4P38089 393 aa9.17□□□□□ -0.94
SHM1YBR263W YEL023CP39992 682 aa9.17□□□□□ -0.94
SHM1YBR263W MAK11P20484 414 aaKnown RBP9.16□□□□□ -0.94
SHM1YBR263W SAP30P38429 201 aa9.16□□□□□ -0.94
SHM1YBR263W TOP2P06786 1428 aaKnown RBP9.16□□□□□ -0.94
SHM1YBR263W YDL129WQ07555 291 aa9.15□□□□□ -0.95
SHM1YBR263W GRE2Q12068 342 aaKnown RBP9.14□□□□□ -0.95
SHM1YBR263W TY2B-LR1P0C2J3 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-FP0CX63 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-GR2P0CX64 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-CP25384 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-DR2Q03494 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY1B-DR1Q03855 1755 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-DR3Q07791 1770 aaKnown RBP9.13□□□□□ -0.95
SHM1YBR263W TY2B-OR1Q12113 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-DR1Q12472 1770 aa9.13□□□□□ -0.95
SHM1YBR263W TY2B-OR2Q12501 1770 aa9.13□□□□□ -0.95
SHM1YBR263W MIF2P35201 549 aa9.13□□□□□ -0.95
SHM1YBR263W RKR1Q04781 1562 aa9.12□□□□□ -0.95
SHM1YBR263W STU1P38198 1513 aa9.12□□□□□ -0.95
SHM1YBR263W EDS1P38073 919 aa9.11□□□□□ -0.95
SHM1YBR263W CHD1P32657 1468 aa9.11□□□□□ -0.95
SHM1YBR263W PTC3P34221 468 aaKnown RBP9.08□□□□□ -0.96
SHM1YBR263W CDC25P04821 1589 aa9.08□□□□□ -0.96
SHM1YBR263W YOR1P53049 1477 aa9.07□□□□□ -0.96
SHM1YBR263W RQC2Q12532 1038 aaKnown RBP9.06□□□□□ -0.96
SHM1YBR263W TY1B-BRQ12193 1756 aa9.05□□□□□ -0.96
SHM1YBR263W TY1B-GR3Q12316 1755 aa9.05□□□□□ -0.96
SHM1YBR263W TY1B-ORQ92393 1755 aa9.05□□□□□ -0.96
SHM1YBR263W GUT1P32190 709 aa9.05□□□□□ -0.96
SHM1YBR263W ATH1P48016 1211 aa9.05□□□□□ -0.96
SHM1YBR263W SMC4Q12267 1418 aa9.05□□□□□ -0.96
SHM1YBR263W CHL1P22516 861 aaPredicted RBP9.04□□□□□ -0.96
SHM1YBR263W COQ8P27697 501 aa9.04□□□□□ -0.96
SHM1YBR263W TY1B-DR3Q99231 1755 aa9.04□□□□□ -0.96
SHM1YBR263W TY2B-BQ12491 1770 aa9.03□□□□□ -0.96
SHM1YBR263W PAN1P32521 1480 aa9.03□□□□□ -0.96
SHM1YBR263W DNF1P32660 1571 aa9.03□□□□□ -0.96
SHM1YBR263W PRE3P38624 215 aa9.02□□□□□ -0.97
SHM1YBR263W MMS22Q06164 1454 aa9□□□□□ -0.97
SHM1YBR263W TY1B-HO13535 1793 aa9□□□□□ -0.97
SHM1YBR263W TY1B-DR5P0C2I2 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-DR6P0C2I3 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-LR2P0C2I5 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-LR3P0C2I6 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W TY1B-PR1P0C2I9 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W TY1B-PR2P0C2J0 1756 aa9□□□□□ -0.97
SHM1YBR263W TY1B-PR3P0C2J1 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W TY1B-JR1P47098 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-ML2Q03434 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W TY1B-ER1Q03612 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-ML1Q04711 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W TY1B-GR2Q12269 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-OLQ12273 1755 aa9□□□□□ -0.97
SHM1YBR263W TY1B-PLQ12414 1755 aaKnown RBP9□□□□□ -0.97
SHM1YBR263W PML39Q03760 334 aa9□□□□□ -0.97
SHM1YBR263W NST1P53935 1240 aa8.99□□□□□ -0.97
SHM1YBR263W BCK2P33306 851 aa8.97□□□□□ -0.97
SHM1YBR263W YTA7P40340 1379 aa8.97□□□□□ -0.97
SHM1YBR263W SOL3P38858 249 aa8.96□□□□□ -0.97
SHM1YBR263W SPP41P38904 1435 aa8.96□□□□□ -0.98
SHM1YBR263W YDR344CQ05510 147 aa8.96□□□□□ -0.98
SHM1YBR263W ESC1Q03661 1658 aaKnown RBP8.96□□□□□ -0.98
SHM1YBR263W RPA190P10964 1664 aaKnown RBP8.92□□□□□ -0.98
SHM1YBR263W MET5P47169 1442 aa8.92□□□□□ -0.98
SHM1YBR263W MYO4P32492 1471 aa8.91□□□□□ -0.98
SHM1YBR263W TSC11P40061 1430 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms