RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W RPN7Q06103 429 aaKnown RBP5.61□□□□□ -1.51
VHC1YBR235W PRP3Q03338 469 aaPredicted RBP5.61□□□□□ -1.51
VHC1YBR235W SNU71P53207 620 aaKnown RBP5.6□□□□□ -1.51
VHC1YBR235W MON2P48563 1636 aaPredicted RBP5.6□□□□□ -1.51
VHC1YBR235W MDG1P53885 366 aa5.59□□□□□ -1.51
VHC1YBR235W BMS1Q08965 1183 aaKnown RBP5.59□□□□□ -1.51
VHC1YBR235W ECM5Q03214 1411 aa5.59□□□□□ -1.51
VHC1YBR235W PLP2Q12017 286 aa5.58□□□□□ -1.52
VHC1YBR235W SSA1P10591 642 aaKnown RBP5.58□□□□□ -1.52
VHC1YBR235W SSA2P10592 639 aaKnown RBP5.58□□□□□ -1.52
VHC1YBR235W RRP14P36080 434 aaKnown RBP5.57□□□□□ -1.52
VHC1YBR235W TRM732Q03496 1420 aa5.57□□□□□ -1.52
VHC1YBR235W LTV1P34078 463 aa5.56□□□□□ -1.52
VHC1YBR235W YSH1Q06224 779 aaPredicted RBP5.56□□□□□ -1.52
VHC1YBR235W SPB4P25808 606 aaPredicted RBP5.56□□□□□ -1.52
VHC1YBR235W RIM101P33400 625 aa5.56□□□□□ -1.52
VHC1YBR235W MED8P38304 223 aa5.56□□□□□ -1.52
VHC1YBR235W TY1B-AO13527 1196 aaKnown RBP5.56□□□□□ -1.52
VHC1YBR235W SPP41P38904 1435 aa5.56□□□□□ -1.52
VHC1YBR235W ECM1P39715 212 aa5.55□□□□□ -1.52
VHC1YBR235W TOP1P04786 769 aa5.55□□□□□ -1.52
VHC1YBR235W DSF2P38213 736 aa5.55□□□□□ -1.52
VHC1YBR235W MMS1Q06211 1407 aa5.54□□□□□ -1.52
VHC1YBR235W SPT6P23615 1451 aaKnown RBP5.54□□□□□ -1.52
VHC1YBR235W TOP2P06786 1428 aaKnown RBP5.54□□□□□ -1.52
VHC1YBR235W BUD4P47136 1447 aa5.54□□□□□ -1.52
VHC1YBR235W SUP35P05453 685 aaKnown RBP5.54□□□□□ -1.52
VHC1YBR235W SSM4P40318 1319 aa5.54□□□□□ -1.52
VHC1YBR235W MCM1P11746 286 aa5.53□□□□□ -1.52
VHC1YBR235W KNS1P32350 737 aaPredicted RBP5.53□□□□□ -1.52
VHC1YBR235W RSC1P53236 928 aa5.53□□□□□ -1.52
VHC1YBR235W CLB1P24868 471 aa5.52□□□□□ -1.53
VHC1YBR235W RPS0AP32905 252 aaKnown RBP5.52□□□□□ -1.53
VHC1YBR235W NST1P53935 1240 aa5.52□□□□□ -1.53
VHC1YBR235W ORC1P54784 914 aaPredicted RBP5.52□□□□□ -1.53
VHC1YBR235W SAP190P36123 1033 aa5.52□□□□□ -1.53
VHC1YBR235W IKI3Q06706 1349 aaKnown RBP5.51□□□□□ -1.53
VHC1YBR235W BDP1P46678 594 aa5.51□□□□□ -1.53
VHC1YBR235W NHA1Q99271 985 aa5.51□□□□□ -1.53
VHC1YBR235W RAD2P07276 1031 aa5.51□□□□□ -1.53
VHC1YBR235W PCT1P13259 424 aa5.51□□□□□ -1.53
VHC1YBR235W KIP3P53086 805 aaKnown RBP5.51□□□□□ -1.53
VHC1YBR235W TLG1Q03322 224 aa5.51□□□□□ -1.53
VHC1YBR235W NOP8Q08287 484 aaPredicted RBP5.51□□□□□ -1.53
VHC1YBR235W SRB8P25648 1427 aa5.51□□□□□ -1.53
VHC1YBR235W CBF5P33322 483 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VHC1YBR235W SEC9P40357 651 aa5.5□□□□□ -1.53
VHC1YBR235W RSC8P43609 557 aaKnown RBP5.5□□□□□ -1.53
VHC1YBR235W SUB1P54000 292 aaKnown RBP5.5□□□□□ -1.53
VHC1YBR235W TY1B-DR4Q07793 1604 aa5.5□□□□□ -1.53
VHC1YBR235W DEP1P31385 405 aa5.5□□□□□ -1.53
VHC1YBR235W PDR10P51533 1564 aa5.5□□□□□ -1.53
VHC1YBR235W TOA1P32773 286 aa5.5□□□□□ -1.53
VHC1YBR235W BYE1P36106 594 aa5.5□□□□□ -1.53
VHC1YBR235W ARL1P38116 183 aaKnown RBP5.5□□□□□ -1.53
VHC1YBR235W UTP13Q05946 817 aaKnown RBP5.5□□□□□ -1.53
VHC1YBR235W MGA2P40578 1113 aa5.49□□□□□ -1.53
VHC1YBR235W PUP2P32379 260 aa5.49□□□□□ -1.53
VHC1YBR235W NOT3P06102 836 aaKnown RBP5.49□□□□□ -1.53
VHC1YBR235W LEM3P42838 414 aa5.49□□□□□ -1.53
VHC1YBR235W TAN1P53072 289 aaPredicted RBP5.48□□□□□ -1.53
VHC1YBR235W HIF1Q12373 385 aa5.48□□□□□ -1.53
VHC1YBR235W PSE1P32337 1089 aaKnown RBP5.48□□□□□ -1.53
VHC1YBR235W TPM2P40414 161 aa5.47□□□□□ -1.53
VHC1YBR235W RAD51P25454 400 aa5.47□□□□□ -1.53
VHC1YBR235W MSP1P28737 362 aa5.47□□□□□ -1.53
VHC1YBR235W COG8Q04632 607 aa5.47□□□□□ -1.53
VHC1YBR235W ITC1P53125 1264 aa5.47□□□□□ -1.53
VHC1YBR235W CHD1P32657 1468 aa5.46□□□□□ -1.54
VHC1YBR235W UBP10P53874 792 aaPredicted RBP5.46□□□□□ -1.54
VHC1YBR235W APL6P46682 809 aa5.46□□□□□ -1.54
VHC1YBR235W NOP14Q99207 810 aaKnown RBP5.44□□□□□ -1.54
VHC1YBR235W MYO4P32492 1471 aa5.44□□□□□ -1.54
VHC1YBR235W PHO87P25360 923 aa5.44□□□□□ -1.54
VHC1YBR235W YLL054CQ12244 843 aa5.44□□□□□ -1.54
VHC1YBR235W SPT5P27692 1063 aaKnown RBP5.43□□□□□ -1.54
VHC1YBR235W RPC82P32349 654 aa5.43□□□□□ -1.54
VHC1YBR235W VPS24P36095 224 aaKnown RBP5.43□□□□□ -1.54
VHC1YBR235W GDT1P38301 280 aaPredicted RBP5.43□□□□□ -1.54
VHC1YBR235W SLP1Q12232 587 aa5.43□□□□□ -1.54
VHC1YBR235W YIR014WP40570 242 aa5.43□□□□□ -1.54
VHC1YBR235W SWH1P35845 1188 aa5.42□□□□□ -1.54
VHC1YBR235W SIT1P39980 628 aa5.42□□□□□ -1.54
VHC1YBR235W VPS60Q03390 229 aa5.42□□□□□ -1.54
VHC1YBR235W YGL140CP53120 1219 aa5.42□□□□□ -1.54
VHC1YBR235W APL5Q08951 932 aaKnown RBP5.42□□□□□ -1.54
VHC1YBR235W PEP1P32319 1579 aa5.42□□□□□ -1.54
VHC1YBR235W YMR1P47147 688 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
VHC1YBR235W YMR102CQ03177 834 aa5.42□□□□□ -1.54
VHC1YBR235W YLR419WQ06698 1435 aaKnown RBP5.41□□□□□ -1.54
VHC1YBR235W LAM1P38851 1228 aa5.41□□□□□ -1.54
VHC1YBR235W ARP5P53946 755 aa5.41□□□□□ -1.54
VHC1YBR235W GIN4Q12263 1142 aa5.41□□□□□ -1.54
VHC1YBR235W EDE1P34216 1381 aa5.41□□□□□ -1.54
VHC1YBR235W CIN4P39110 191 aa5.41□□□□□ -1.54
VHC1YBR235W AIM20P40451 204 aa5.41□□□□□ -1.54
VHC1YBR235W SRP54P20424 541 aaKnown RBP5.41□□□□□ -1.54
VHC1YBR235W PEA2P40091 420 aa5.41□□□□□ -1.54
VHC1YBR235W ERV41Q04651 352 aa5.41□□□□□ -1.54
VHC1YBR235W MAK11P20484 414 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms