RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MMS22Q06164 1454 aa10.27□□□□□ -0.77
SWD1YAR003W PAN1P32521 1480 aa10.26□□□□□ -0.77
SWD1YAR003W TY1B-DR3Q99231 1755 aa10.25□□□□□ -0.77
SWD1YAR003W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.25□□□□□ -0.77not detected
SWD1YAR003W TY2B-BQ12491 1770 aa10.24□□□□□ -0.77
SWD1YAR003W SPP41P38904 1435 aa10.24□□□□□ -0.77
SWD1YAR003W TY1B-BRQ12193 1756 aa10.21□□□□□ -0.77
SWD1YAR003W TY1B-GR3Q12316 1755 aa10.21□□□□□ -0.77
SWD1YAR003W TY1B-ORQ92393 1755 aa10.21□□□□□ -0.77
SWD1YAR003W ESC1Q03661 1658 aaKnown RBP10.2□□□□□ -0.78
SWD1YAR003W TY1B-HO13535 1793 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-DR5P0C2I2 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-DR6P0C2I3 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-LR2P0C2I5 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-LR3P0C2I6 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TY1B-PR1P0C2I9 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TY1B-PR2P0C2J0 1756 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-PR3P0C2J1 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TY1B-JR1P47098 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-ML2Q03434 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TY1B-ER1Q03612 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-ML1Q04711 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TY1B-GR2Q12269 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-OLQ12273 1755 aa10.19□□□□□ -0.78
SWD1YAR003W TY1B-PLQ12414 1755 aaKnown RBP10.19□□□□□ -0.78
SWD1YAR003W TRM732Q03496 1420 aa10.18□□□□□ -0.78
SWD1YAR003W SAS10Q12136 610 aaPredicted RBP10.18□□□□□ -0.78
SWD1YAR003W TSC11P40061 1430 aa10.15□□□□□ -0.79
SWD1YAR003W TAF7Q05021 590 aa10.14□□□□□ -0.79
SWD1YAR003W VTH1P40438 1549 aa10.13□□□□□ -0.79
SWD1YAR003W VTH2P40890 1549 aa10.13□□□□□ -0.79
SWD1YAR003W PSD2P53037 1138 aaKnown RBP10.13□□□□□ -0.79
SWD1YAR003W DNF1P32660 1571 aa10.13□□□□□ -0.79
SWD1YAR003W STH1P32597 1359 aa10.13□□□□□ -0.79
SWD1YAR003W SNQ2P32568 1501 aaKnown RBP10.09□□□□□ -0.79
SWD1YAR003W RPA190P10964 1664 aaKnown RBP10.09□□□□□ -0.79
SWD1YAR003W MET5P47169 1442 aa10.08□□□□□ -0.8
SWD1YAR003W BUD31P25337 157 aaPredicted RBP10.04□□□□□ -0.8
SWD1YAR003W RTT106P40161 455 aa10.03□□□□□ -0.8
SWD1YAR003W MGA2P40578 1113 aa10.03□□□□□ -0.8
SWD1YAR003W NUP159P40477 1460 aa10.02□□□□□ -0.81
SWD1YAR003W NTE1Q04958 1679 aa10.02□□□□□ -0.81
SWD1YAR003W NSR1P27476 414 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
SWD1YAR003W MLP2P40457 1679 aa10.01□□□□□ -0.81
SWD1YAR003W TY1B-JR2P47100 1755 aaKnown RBP10.01□□□□□ -0.81
SWD1YAR003W TY1B-ER2Q03619 1755 aa10.01□□□□□ -0.81
SWD1YAR003W TY1B-MR1Q04214 1755 aa10.01□□□□□ -0.81
SWD1YAR003W TY1B-MR2Q04670 1755 aaKnown RBP10.01□□□□□ -0.81
SWD1YAR003W TY1B-LR1Q12088 1755 aaKnown RBP10.01□□□□□ -0.81
SWD1YAR003W TY1B-NL1Q12112 1755 aa10.01□□□□□ -0.81
SWD1YAR003W TY1B-GR1Q12141 1755 aa10.01□□□□□ -0.81
SWD1YAR003W TY1B-BLQ12490 1755 aa10.01□□□□□ -0.81
SWD1YAR003W PDR15Q04182 1529 aaKnown RBP9.97□□□□□ -0.81
SWD1YAR003W IFH1P39520 1085 aa9.97□□□□□ -0.81
SWD1YAR003W SNT2P53127 1403 aa9.97□□□□□ -0.81
SWD1YAR003W RPO21P04050 1733 aaKnown RBP9.96□□□□□ -0.81
SWD1YAR003W MRM1P25270 412 aa9.96□□□□□ -0.82
SWD1YAR003W CST9Q06032 482 aa9.96□□□□□ -0.82
SWD1YAR003W YOR238WQ08634 303 aa9.96□□□□□ -0.82
SWD1YAR003W MST1P07236 462 aa9.95□□□□□ -0.82
SWD1YAR003W UBP9P39967 754 aa9.95□□□□□ -0.82
SWD1YAR003W YAP5P40574 245 aa9.94□□□□□ -0.82
SWD1YAR003W GEA2P39993 1459 aaKnown RBP9.93□□□□□ -0.82
SWD1YAR003W ULS1Q08562 1619 aa9.92□□□□□ -0.82
SWD1YAR003W LTE1P07866 1435 aa9.91□□□□□ -0.82
SWD1YAR003W MET10P39692 1035 aa9.9□□□□□ -0.82
SWD1YAR003W VPS15P22219 1454 aa9.9□□□□□ -0.83
SWD1YAR003W GEA1P47102 1408 aaPredicted RBP9.88□□□□□ -0.83
SWD1YAR003W YRF1-1P0CX20 1796 aa9.85□□□□□ -0.83
SWD1YAR003W YRF1-5P0CX21 1796 aa9.85□□□□□ -0.83
SWD1YAR003W YRF1-8P0CX22 1796 aa9.85□□□□□ -0.83
SWD1YAR003W RTG3P38165 486 aa9.81□□□□□ -0.84
SWD1YAR003W PDR12Q02785 1511 aa9.81□□□□□ -0.84
SWD1YAR003W CAT8P39113 1433 aa9.81□□□□□ -0.84
SWD1YAR003W IRC20Q06554 1556 aa9.8□□□□□ -0.84
SWD1YAR003W DRS2P39524 1355 aa9.78□□□□□ -0.84
SWD1YAR003W NUP157P40064 1391 aaKnown RBP9.78□□□□□ -0.84
SWD1YAR003W SPO14P36126 1683 aa9.77□□□□□ -0.84
SWD1YAR003W GDB1Q06625 1536 aa9.77□□□□□ -0.85
SWD1YAR003W NUP170P38181 1502 aa9.75□□□□□ -0.85
SWD1YAR003W IKI3Q06706 1349 aaKnown RBP9.75□□□□□ -0.85
SWD1YAR003W VPS29P38759 282 aa9.74□□□□□ -0.85
SWD1YAR003W YMR1P47147 688 aaKnown RBP RIP-Chip data9.73□□□□□ -0.85not detected
SWD1YAR003W TY3B-GQ99315 1547 aa9.72□□□□□ -0.85
SWD1YAR003W PDR10P51533 1564 aa9.72□□□□□ -0.85
SWD1YAR003W IQG1Q12280 1495 aa9.72□□□□□ -0.85
SWD1YAR003W GTT3P39996 337 aa9.71□□□□□ -0.86
SWD1YAR003W CKB1P43639 278 aa9.71□□□□□ -0.86
SWD1YAR003W BUD3P25558 1636 aa9.71□□□□□ -0.86
SWD1YAR003W YBL029C-AQ3E756 94 aa9.7□□□□□ -0.86
SWD1YAR003W YBT1P32386 1661 aa9.7□□□□□ -0.86
SWD1YAR003W ITT1Q04638 464 aa9.69□□□□□ -0.86
SWD1YAR003W PIB1Q06651 286 aa9.69□□□□□ -0.86
SWD1YAR003W RCR1P38212 213 aa9.67□□□□□ -0.86
SWD1YAR003W DBP1P24784 617 aaKnown RBP9.66□□□□□ -0.86
SWD1YAR003W TRM3Q07527 1436 aa9.65□□□□□ -0.86
SWD1YAR003W ARO1P08566 1588 aaKnown RBP9.65□□□□□ -0.86
SWD1YAR003W VNX1P42839 908 aa9.64□□□□□ -0.87
SWD1YAR003W SRB8P25648 1427 aa9.64□□□□□ -0.87
SWD1YAR003W WSC3Q12215 556 aa9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 278.4 ms