RNA–Protein interactions for RNA: ENST00000641944.1

CASC19-267, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,117 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-267ENST00000641944 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
CASC19-267ENST00000641944 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
CASC19-267ENST00000641944 RGL2O15211 777 aa11.61□□□□□ -0.55
CASC19-267ENST00000641944 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
CASC19-267ENST00000641944 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
CASC19-267ENST00000641944 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
CASC19-267ENST00000641944 GABBR2O75899 941 aa11.57□□□□□ -0.56
CASC19-267ENST00000641944 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
CASC19-267ENST00000641944 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
CASC19-267ENST00000641944 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
CASC19-267ENST00000641944 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
CASC19-267ENST00000641944 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
CASC19-267ENST00000641944 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
CASC19-267ENST00000641944 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CASC19-267ENST00000641944 GSE1Q14687 1217 aa11.44□□□□□ -0.58
CASC19-267ENST00000641944 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
CASC19-267ENST00000641944 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
CASC19-267ENST00000641944 BCANQ96GW7 911 aa11.43□□□□□ -0.58
CASC19-267ENST00000641944 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
CASC19-267ENST00000641944 CLCN6P51797 869 aa11.41□□□□□ -0.58
CASC19-267ENST00000641944 NUBP1P53384 320 aa11.39□□□□□ -0.59
CASC19-267ENST00000641944 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
CASC19-267ENST00000641944 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CASC19-267ENST00000641944 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CASC19-267ENST00000641944 CCDC61Q9Y6R9 512 aa11.36□□□□□ -0.59
CASC19-267ENST00000641944 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
CASC19-267ENST00000641944 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
CASC19-267ENST00000641944 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
CASC19-267ENST00000641944 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
CASC19-267ENST00000641944 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
CASC19-267ENST00000641944 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
CASC19-267ENST00000641944 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
CASC19-267ENST00000641944 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
CASC19-267ENST00000641944 MAP3K13O43283 966 aa11.22□□□□□ -0.61
CASC19-267ENST00000641944 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
CASC19-267ENST00000641944 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
CASC19-267ENST00000641944 STK25O00506 426 aa11.18□□□□□ -0.62
CASC19-267ENST00000641944 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
CASC19-267ENST00000641944 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
CASC19-267ENST00000641944 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
CASC19-267ENST00000641944 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
CASC19-267ENST00000641944 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
CASC19-267ENST00000641944 PYGBP11216 843 aa11.13□□□□□ -0.63
CASC19-267ENST00000641944 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
CASC19-267ENST00000641944 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
CASC19-267ENST00000641944 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
CASC19-267ENST00000641944 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
CASC19-267ENST00000641944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 IFNL1Q8IU54 200 aa11.1□□□□□ -0.63
CASC19-267ENST00000641944 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
CASC19-267ENST00000641944 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
CASC19-267ENST00000641944 TIE1P35590 1138 aa11.08□□□□□ -0.64
CASC19-267ENST00000641944 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CASC19-267ENST00000641944 POTEMA6NI47 508 aa11.05□□□□□ -0.64
CASC19-267ENST00000641944 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
CASC19-267ENST00000641944 NBR1Q14596 966 aa11.04□□□□□ -0.64
CASC19-267ENST00000641944 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
CASC19-267ENST00000641944 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
CASC19-267ENST00000641944 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
CASC19-267ENST00000641944 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
CASC19-267ENST00000641944 OTUD5Q96G74 571 aa11□□□□□ -0.65
CASC19-267ENST00000641944 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
CASC19-267ENST00000641944 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
CASC19-267ENST00000641944 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
CASC19-267ENST00000641944 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
CASC19-267ENST00000641944 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
CASC19-267ENST00000641944 C7P10643 843 aa10.97□□□□□ -0.65
CASC19-267ENST00000641944 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
CASC19-267ENST00000641944 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CASC19-267ENST00000641944 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
CASC19-267ENST00000641944 IER5LQ5T953 404 aa10.88□□□□□ -0.67
CASC19-267ENST00000641944 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
CASC19-267ENST00000641944 SEC24BO95487 1268 aa10.86□□□□□ -0.67
CASC19-267ENST00000641944 PSEN1P49768 467 aa10.86□□□□□ -0.67
CASC19-267ENST00000641944 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
CASC19-267ENST00000641944 PLCG2P16885 1265 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
CASC19-267ENST00000641944 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 MFRPQ9BY79 579 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
CASC19-267ENST00000641944 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
CASC19-267ENST00000641944 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
CASC19-267ENST00000641944 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
CASC19-267ENST00000641944 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
CASC19-267ENST00000641944 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
CASC19-267ENST00000641944 SOX12O15370 315 aa10.71□□□□□ -0.69
CASC19-267ENST00000641944 NLRP6P59044 892 aa10.71□□□□□ -0.69
CASC19-267ENST00000641944 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms