RNA–Protein interactions for RNA: ENST00000640999.1

STRADA-254, Transcript of STE20-related kinase adaptor alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene STRADA, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-254ENST00000640999 CTTNBP2Q8WZ74 1663 aa25.76■■□□□ 1.71
STRADA-254ENST00000640999 LRRC9Q6ZRR7 1453 aa25.74■■□□□ 1.71
STRADA-254ENST00000640999 EFCAB5A4FU69 1503 aa25.74■■□□□ 1.71
STRADA-254ENST00000640999 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
STRADA-254ENST00000640999 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
STRADA-254ENST00000640999 ABCA5Q8WWZ7 1642 aa25.73■■□□□ 1.71
STRADA-254ENST00000640999 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
STRADA-254ENST00000640999 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
STRADA-254ENST00000640999 P3H3Q8IVL6 736 aa25.68■■□□□ 1.7
STRADA-254ENST00000640999 FHOD3Q2V2M9 1422 aa25.67■■□□□ 1.7
STRADA-254ENST00000640999 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
STRADA-254ENST00000640999 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
STRADA-254ENST00000640999 FYCO1Q9BQS8 1478 aa25.64■■□□□ 1.7
STRADA-254ENST00000640999 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.694e-7■■■■■ 28.2
STRADA-254ENST00000640999 CASKIN1Q8WXD9 1431 aa25.62■■□□□ 1.69
STRADA-254ENST00000640999 PHLDB1Q86UU1 1377 aa25.61■■□□□ 1.69
STRADA-254ENST00000640999 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
STRADA-254ENST00000640999 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
STRADA-254ENST00000640999 ITGAEP38570 1179 aa25.56■■□□□ 1.68
STRADA-254ENST00000640999 SAMD9Q5K651 1589 aa25.54■■□□□ 1.68
STRADA-254ENST00000640999 FMN1Q68DA7 1419 aa25.54■■□□□ 1.68
STRADA-254ENST00000640999 ATP1B4Q9UN42 357 aaPredicted RBP25.52■■□□□ 1.68
STRADA-254ENST00000640999 RAB3GAP2Q9H2M9 1393 aa25.51■■□□□ 1.67
STRADA-254ENST00000640999 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
STRADA-254ENST00000640999 ACIN1Q9UKV3 1341 aaKnown RBP25.5■■□□□ 1.67
STRADA-254ENST00000640999 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
STRADA-254ENST00000640999 NEUROD1Q13562 356 aa25.45■■□□□ 1.66
STRADA-254ENST00000640999 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
STRADA-254ENST00000640999 FAM50AQ14320 339 aaKnown RBP25.42■■□□□ 1.66
STRADA-254ENST00000640999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.66
STRADA-254ENST00000640999 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
STRADA-254ENST00000640999 LRRIQ1Q96JM4 1722 aa25.41■■□□□ 1.66
STRADA-254ENST00000640999 MAPKBP1O60336 1514 aa25.4■■□□□ 1.66
STRADA-254ENST00000640999 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.66
STRADA-254ENST00000640999 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
STRADA-254ENST00000640999 MIER1Q8N108 512 aa25.37■■□□□ 1.65
STRADA-254ENST00000640999 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
STRADA-254ENST00000640999 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
STRADA-254ENST00000640999 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
STRADA-254ENST00000640999 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
STRADA-254ENST00000640999 IQGAP2Q13576 1575 aa25.26■■□□□ 1.63
STRADA-254ENST00000640999 NCOA2Q15596 1464 aa25.23■■□□□ 1.63
STRADA-254ENST00000640999 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
STRADA-254ENST00000640999 EHBP1L1Q8N3D4 1523 aa25.23■■□□□ 1.63
STRADA-254ENST00000640999 WDR62O43379 1518 aa25.23■■□□□ 1.63
STRADA-254ENST00000640999 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
STRADA-254ENST00000640999 MYOM3Q5VTT5 1437 aa25.2■■□□□ 1.62
STRADA-254ENST00000640999 CCDC18Q5T9S5 1454 aa25.19■■□□□ 1.62
STRADA-254ENST00000640999 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
STRADA-254ENST00000640999 HECW1Q76N89 1606 aa25.17■■□□□ 1.62
STRADA-254ENST00000640999 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
STRADA-254ENST00000640999 MAGI3Q5TCQ9 1506 aa25.16■■□□□ 1.62
STRADA-254ENST00000640999 UGGT2Q9NYU1 1516 aa25.16■■□□□ 1.62
STRADA-254ENST00000640999 PTPRKQ15262 1439 aa25.15■■□□□ 1.62
STRADA-254ENST00000640999 YTHDC1Q96MU7 727 aaKnown RBP25.14■■□□□ 1.61
STRADA-254ENST00000640999 GTF3C3Q9Y5Q9 886 aa25.14■■□□□ 1.61
STRADA-254ENST00000640999 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
STRADA-254ENST00000640999 SIN3AQ96ST3 1273 aa25.12■■□□□ 1.61
STRADA-254ENST00000640999 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
STRADA-254ENST00000640999 TIMELESSQ9UNS1 1208 aa25.09■■□□□ 1.61
STRADA-254ENST00000640999 EPRSP07814 1512 aaKnown RBP25.09■■□□□ 1.61
STRADA-254ENST00000640999 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
STRADA-254ENST00000640999 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
STRADA-254ENST00000640999 NAIPQ13075 1403 aa25.03■■□□□ 1.6
STRADA-254ENST00000640999 TCOF1Q13428 1488 aaKnown RBP25.03■■□□□ 1.6
STRADA-254ENST00000640999 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
STRADA-254ENST00000640999 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
STRADA-254ENST00000640999 KIAA0556O60303 1618 aa25■■□□□ 1.59
STRADA-254ENST00000640999 DISP1Q96F81 1524 aa25■■□□□ 1.59
STRADA-254ENST00000640999 GRIN2AQ12879 1464 aa25■■□□□ 1.59
STRADA-254ENST00000640999 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
STRADA-254ENST00000640999 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
STRADA-254ENST00000640999 MIA2Q96PC5 1412 aa24.94■■□□□ 1.58
STRADA-254ENST00000640999 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
STRADA-254ENST00000640999 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
STRADA-254ENST00000640999 AKNAQ7Z591 1439 aa24.89■■□□□ 1.57
STRADA-254ENST00000640999 RAPGEF6Q8TEU7 1601 aa24.88■■□□□ 1.57
STRADA-254ENST00000640999 NUP153P49790 1475 aaKnown RBP24.88■■□□□ 1.57
STRADA-254ENST00000640999 ARID3CA6NKF2 412 aa24.86■■□□□ 1.57
STRADA-254ENST00000640999 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
STRADA-254ENST00000640999 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
STRADA-254ENST00000640999 RRP7BPQ9NSQ0 103 aa24.84■■□□□ 1.57
STRADA-254ENST00000640999 TONSLQ96HA7 1378 aa24.84■■□□□ 1.57
STRADA-254ENST00000640999 CHIC2Q9UKJ5 165 aa24.82■■□□□ 1.56
STRADA-254ENST00000640999 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
STRADA-254ENST00000640999 KDM6BO15054 1643 aa24.79■■□□□ 1.56
STRADA-254ENST00000640999 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
STRADA-254ENST00000640999 NUP160Q12769 1436 aa24.74■■□□□ 1.55
STRADA-254ENST00000640999 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
STRADA-254ENST00000640999 CDK11AQ9UQ88 783 aaPredicted RBP24.74■■□□□ 1.55
STRADA-254ENST00000640999 KDM5BQ9UGL1 1544 aa24.74■■□□□ 1.55
STRADA-254ENST00000640999 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
STRADA-254ENST00000640999 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
STRADA-254ENST00000640999 DAPK1P53355 1430 aa24.73■■□□□ 1.55
STRADA-254ENST00000640999 ROCK1Q13464 1354 aa24.71■■□□□ 1.55
STRADA-254ENST00000640999 PLB1Q6P1J6 1458 aa24.69■■□□□ 1.54
STRADA-254ENST00000640999 ABCC5O15440 1437 aa24.69■■□□□ 1.54
STRADA-254ENST00000640999 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
STRADA-254ENST00000640999 FBLN2P98095 1184 aa24.68■■□□□ 1.54
STRADA-254ENST00000640999 TRIM52Q96A61 297 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms