RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
SPIN3-232ENST00000639956 BCANQ96GW7 911 aa17.96■□□□□ 0.47
SPIN3-232ENST00000639956 FHOD3Q2V2M9 1422 aa17.94■□□□□ 0.46
SPIN3-232ENST00000639956 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
SPIN3-232ENST00000639956 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
SPIN3-232ENST00000639956 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
SPIN3-232ENST00000639956 SETD5Q9C0A6 1442 aa17.88■□□□□ 0.45
SPIN3-232ENST00000639956 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
SPIN3-232ENST00000639956 NESP48681 1621 aa17.86■□□□□ 0.45
SPIN3-232ENST00000639956 TIAM1Q13009 1591 aa17.84■□□□□ 0.45
SPIN3-232ENST00000639956 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
SPIN3-232ENST00000639956 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.44
SPIN3-232ENST00000639956 MAPKBP1O60336 1514 aa17.83■□□□□ 0.44
SPIN3-232ENST00000639956 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
SPIN3-232ENST00000639956 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
SPIN3-232ENST00000639956 CHIC2Q9UKJ5 165 aa17.8■□□□□ 0.44
SPIN3-232ENST00000639956 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
SPIN3-232ENST00000639956 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
SPIN3-232ENST00000639956 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
SPIN3-232ENST00000639956 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
SPIN3-232ENST00000639956 FKBP8Q14318 412 aa17.74■□□□□ 0.43
SPIN3-232ENST00000639956 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
SPIN3-232ENST00000639956 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
SPIN3-232ENST00000639956 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-232ENST00000639956 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
SPIN3-232ENST00000639956 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
SPIN3-232ENST00000639956 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
SPIN3-232ENST00000639956 ANP32CO43423 234 aa17.67■□□□□ 0.42
SPIN3-232ENST00000639956 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
SPIN3-232ENST00000639956 FOXD1Q16676 465 aa17.64■□□□□ 0.42
SPIN3-232ENST00000639956 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
SPIN3-232ENST00000639956 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
SPIN3-232ENST00000639956 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
SPIN3-232ENST00000639956 CASKIN1Q8WXD9 1431 aa17.6■□□□□ 0.41
SPIN3-232ENST00000639956 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
SPIN3-232ENST00000639956 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
SPIN3-232ENST00000639956 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
SPIN3-232ENST00000639956 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.41
SPIN3-232ENST00000639956 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
SPIN3-232ENST00000639956 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
SPIN3-232ENST00000639956 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
SPIN3-232ENST00000639956 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
SPIN3-232ENST00000639956 NEFLP07196 543 aa17.55■□□□□ 0.4
SPIN3-232ENST00000639956 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
SPIN3-232ENST00000639956 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
SPIN3-232ENST00000639956 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
SPIN3-232ENST00000639956 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPIN3-232ENST00000639956 NCOA2Q15596 1464 aa17.51■□□□□ 0.39
SPIN3-232ENST00000639956 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
SPIN3-232ENST00000639956 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
SPIN3-232ENST00000639956 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
SPIN3-232ENST00000639956 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
SPIN3-232ENST00000639956 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
SPIN3-232ENST00000639956 NAIPQ13075 1403 aa17.47■□□□□ 0.39
SPIN3-232ENST00000639956 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
SPIN3-232ENST00000639956 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
SPIN3-232ENST00000639956 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.38
SPIN3-232ENST00000639956 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
SPIN3-232ENST00000639956 HFM1A2PYH4 1435 aa17.44■□□□□ 0.38
SPIN3-232ENST00000639956 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
SPIN3-232ENST00000639956 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
SPIN3-232ENST00000639956 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
SPIN3-232ENST00000639956 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
SPIN3-232ENST00000639956 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
SPIN3-232ENST00000639956 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
SPIN3-232ENST00000639956 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
SPIN3-232ENST00000639956 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
SPIN3-232ENST00000639956 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
SPIN3-232ENST00000639956 CTTNBP2Q8WZ74 1663 aa17.4■□□□□ 0.38
SPIN3-232ENST00000639956 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.38
SPIN3-232ENST00000639956 CUL7Q14999 1698 aa17.39■□□□□ 0.37
SPIN3-232ENST00000639956 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
SPIN3-232ENST00000639956 FBLN2P98095 1184 aa17.39■□□□□ 0.37
SPIN3-232ENST00000639956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPIN3-232ENST00000639956 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
SPIN3-232ENST00000639956 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
SPIN3-232ENST00000639956 MYT1Q01538 1121 aa17.37■□□□□ 0.37
SPIN3-232ENST00000639956 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
SPIN3-232ENST00000639956 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
SPIN3-232ENST00000639956 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
SPIN3-232ENST00000639956 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
SPIN3-232ENST00000639956 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
SPIN3-232ENST00000639956 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
SPIN3-232ENST00000639956 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
SPIN3-232ENST00000639956 KDM6BO15054 1643 aa17.31■□□□□ 0.36
SPIN3-232ENST00000639956 SUPT6HQ7KZ85 1726 aaKnown RBP17.29■□□□□ 0.36
SPIN3-232ENST00000639956 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
SPIN3-232ENST00000639956 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
SPIN3-232ENST00000639956 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
SPIN3-232ENST00000639956 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
SPIN3-232ENST00000639956 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
SPIN3-232ENST00000639956 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
SPIN3-232ENST00000639956 DENND4BO75064 1496 aaPredicted RBP17.26■□□□□ 0.35
SPIN3-232ENST00000639956 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
SPIN3-232ENST00000639956 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
SPIN3-232ENST00000639956 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
SPIN3-232ENST00000639956 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
SPIN3-232ENST00000639956 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
SPIN3-232ENST00000639956 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
SPIN3-232ENST00000639956 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms