RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 UBE2Q2Q8WVN8 375 aa14.99□□□□□ -0.01
SPIN3-230ENST00000639888 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
SPIN3-230ENST00000639888 IPO9Q96P70 1041 aaKnown RBP14.97□□□□□ -0.01
SPIN3-230ENST00000639888 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
SPIN3-230ENST00000639888 MRS2Q9HD23 443 aa14.94□□□□□ -0.02
SPIN3-230ENST00000639888 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
SPIN3-230ENST00000639888 WIZO95785 1651 aa14.92□□□□□ -0.02
SPIN3-230ENST00000639888 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
SPIN3-230ENST00000639888 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
SPIN3-230ENST00000639888 PODXL2Q9NZ53 605 aa14.89□□□□□ -0.03
SPIN3-230ENST00000639888 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
SPIN3-230ENST00000639888 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
SPIN3-230ENST00000639888 CCER2I3L3R5 266 aa14.86□□□□□ -0.03
SPIN3-230ENST00000639888 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
SPIN3-230ENST00000639888 HSP90AA1P07900 732 aaKnown RBP14.84□□□□□ -0.03
SPIN3-230ENST00000639888 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
SPIN3-230ENST00000639888 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
SPIN3-230ENST00000639888 SOGA1O94964 1423 aa14.82□□□□□ -0.04
SPIN3-230ENST00000639888 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
SPIN3-230ENST00000639888 TONSLQ96HA7 1378 aa14.82□□□□□ -0.04
SPIN3-230ENST00000639888 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
SPIN3-230ENST00000639888 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
SPIN3-230ENST00000639888 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
SPIN3-230ENST00000639888 EEA1Q15075 1411 aa14.79□□□□□ -0.04
SPIN3-230ENST00000639888 GSE1Q14687 1217 aa14.78□□□□□ -0.04
SPIN3-230ENST00000639888 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
SPIN3-230ENST00000639888 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
SPIN3-230ENST00000639888 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.04
SPIN3-230ENST00000639888 GOLGA3Q08378 1498 aa14.74□□□□□ -0.05
SPIN3-230ENST00000639888 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
SPIN3-230ENST00000639888 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
SPIN3-230ENST00000639888 CLIP1P30622 1438 aa14.72□□□□□ -0.05
SPIN3-230ENST00000639888 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
SPIN3-230ENST00000639888 ANP32BQ92688 251 aaKnown RBP14.72□□□□□ -0.05
SPIN3-230ENST00000639888 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
SPIN3-230ENST00000639888 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
SPIN3-230ENST00000639888 ARID3AQ99856 593 aa14.66□□□□□ -0.06
SPIN3-230ENST00000639888 ZMYND15Q9H091 742 aa14.64□□□□□ -0.07
SPIN3-230ENST00000639888 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
SPIN3-230ENST00000639888 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
SPIN3-230ENST00000639888 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SPIN3-230ENST00000639888 L1TD1Q5T7N2 865 aaKnown RBP14.62□□□□□ -0.07
SPIN3-230ENST00000639888 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
SPIN3-230ENST00000639888 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
SPIN3-230ENST00000639888 UPF2Q9HAU5 1272 aaKnown RBP14.62□□□□□ -0.07
SPIN3-230ENST00000639888 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
SPIN3-230ENST00000639888 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
SPIN3-230ENST00000639888 TCERG1O14776 1098 aaKnown RBP14.6□□□□□ -0.07
SPIN3-230ENST00000639888 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
SPIN3-230ENST00000639888 RGS3P49796 1198 aa14.59□□□□□ -0.07
SPIN3-230ENST00000639888 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPIN3-230ENST00000639888 BECN1Q14457 450 aa14.59□□□□□ -0.07
SPIN3-230ENST00000639888 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
SPIN3-230ENST00000639888 PDE4AP27815 886 aa14.59□□□□□ -0.07
SPIN3-230ENST00000639888 NFKBIBQ15653 356 aa14.57□□□□□ -0.08
SPIN3-230ENST00000639888 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
SPIN3-230ENST00000639888 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
SPIN3-230ENST00000639888 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
SPIN3-230ENST00000639888 SLC24A1O60721 1099 aa14.55□□□□□ -0.08
SPIN3-230ENST00000639888 P3H3Q8IVL6 736 aa14.54□□□□□ -0.08
SPIN3-230ENST00000639888 SLKQ9H2G2 1235 aaPredicted RBP14.54□□□□□ -0.08
SPIN3-230ENST00000639888 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
SPIN3-230ENST00000639888 SPRYD3Q8NCJ5 442 aa14.49□□□□□ -0.09
SPIN3-230ENST00000639888 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
SPIN3-230ENST00000639888 GOLGA6L3A6NEY3 463 aa14.47□□□□□ -0.09
SPIN3-230ENST00000639888 CDK11BP21127 795 aaKnown RBP14.47□□□□□ -0.09
SPIN3-230ENST00000639888 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.09
SPIN3-230ENST00000639888 NUDCQ9Y266 331 aa14.46□□□□□ -0.1
SPIN3-230ENST00000639888 KANK4Q5T7N3 995 aaPredicted RBP14.44□□□□□ -0.1
SPIN3-230ENST00000639888 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
SPIN3-230ENST00000639888 FRAT2O75474 233 aaPredicted RBP14.44□□□□□ -0.1
SPIN3-230ENST00000639888 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.43□□□□□ -0.1
SPIN3-230ENST00000639888 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
SPIN3-230ENST00000639888 DNTTIP2Q5QJE6 756 aaKnown RBP14.42□□□□□ -0.1
SPIN3-230ENST00000639888 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
SPIN3-230ENST00000639888 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
SPIN3-230ENST00000639888 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
SPIN3-230ENST00000639888 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
SPIN3-230ENST00000639888 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
SPIN3-230ENST00000639888 MSNP26038 577 aaKnown RBP14.41□□□□□ -0.1
SPIN3-230ENST00000639888 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
SPIN3-230ENST00000639888 RRP9O43818 475 aaKnown RBP14.41□□□□□ -0.1
SPIN3-230ENST00000639888 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
SPIN3-230ENST00000639888 RCAN3Q9UKA8 241 aa14.38□□□□□ -0.11
SPIN3-230ENST00000639888 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
SPIN3-230ENST00000639888 ZBED9Q6R2W3 1325 aa14.38□□□□□ -0.11
SPIN3-230ENST00000639888 FAM13BQ9NYF5 915 aa14.38□□□□□ -0.11
SPIN3-230ENST00000639888 CHIC2Q9UKJ5 165 aa14.38□□□□□ -0.11
SPIN3-230ENST00000639888 C11orf95C9JLR9 678 aaPredicted RBP14.35□□□□□ -0.11
SPIN3-230ENST00000639888 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.11
SPIN3-230ENST00000639888 MS4A1P11836 297 aa14.32□□□□□ -0.12
SPIN3-230ENST00000639888 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
SPIN3-230ENST00000639888 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
SPIN3-230ENST00000639888 SLC4A1APQ9BWU0 796 aaKnown RBP14.31□□□□□ -0.12
SPIN3-230ENST00000639888 GOLGA6L22H0YM25 854 aa14.3□□□□□ -0.12
SPIN3-230ENST00000639888 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
SPIN3-230ENST00000639888 PLIN1O60240 522 aa14.29□□□□□ -0.12
SPIN3-230ENST00000639888 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
SPIN3-230ENST00000639888 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
SPIN3-230ENST00000639888 PDE4CQ08493 712 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms