RNA–Protein interactions for RNA: ENST00000639525.1

SPIN3-223, Transcript of spindlin family member 3, humanhuman

TSL 5 BASIC

Gene SPIN3, Length 3,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-223ENST00000639525 CUX2O14529 1486 aa16.34■□□□□ 0.21
SPIN3-223ENST00000639525 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.21
SPIN3-223ENST00000639525 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
SPIN3-223ENST00000639525 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-223ENST00000639525 FOXD1Q16676 465 aa16.26■□□□□ 0.19
SPIN3-223ENST00000639525 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
SPIN3-223ENST00000639525 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
SPIN3-223ENST00000639525 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
SPIN3-223ENST00000639525 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
SPIN3-223ENST00000639525 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
SPIN3-223ENST00000639525 KIF21BO75037 1637 aa16.22■□□□□ 0.19
SPIN3-223ENST00000639525 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
SPIN3-223ENST00000639525 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPIN3-223ENST00000639525 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-223ENST00000639525 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
SPIN3-223ENST00000639525 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
SPIN3-223ENST00000639525 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
SPIN3-223ENST00000639525 ANP32EQ9BTT0 268 aa16.14■□□□□ 0.17
SPIN3-223ENST00000639525 NPM2Q86SE8 214 aaKnown RBP16.13■□□□□ 0.17
SPIN3-223ENST00000639525 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
SPIN3-223ENST00000639525 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
SPIN3-223ENST00000639525 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
SPIN3-223ENST00000639525 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
SPIN3-223ENST00000639525 NBR1Q14596 966 aa16.09■□□□□ 0.17
SPIN3-223ENST00000639525 IGF1RP08069 1367 aa16.08■□□□□ 0.17
SPIN3-223ENST00000639525 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
SPIN3-223ENST00000639525 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
SPIN3-223ENST00000639525 TMC1Q8TDI8 760 aa16.06■□□□□ 0.16
SPIN3-223ENST00000639525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
SPIN3-223ENST00000639525 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
SPIN3-223ENST00000639525 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-223ENST00000639525 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
SPIN3-223ENST00000639525 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
SPIN3-223ENST00000639525 CCER2I3L3R5 266 aa16■□□□□ 0.15
SPIN3-223ENST00000639525 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
SPIN3-223ENST00000639525 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
SPIN3-223ENST00000639525 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
SPIN3-223ENST00000639525 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
SPIN3-223ENST00000639525 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
SPIN3-223ENST00000639525 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
SPIN3-223ENST00000639525 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
SPIN3-223ENST00000639525 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
SPIN3-223ENST00000639525 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
SPIN3-223ENST00000639525 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
SPIN3-223ENST00000639525 ANP32AP39687 249 aaKnown RBP15.94■□□□□ 0.14
SPIN3-223ENST00000639525 RRBP1Q9P2E9 1410 aaKnown RBP15.92■□□□□ 0.14
SPIN3-223ENST00000639525 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
SPIN3-223ENST00000639525 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
SPIN3-223ENST00000639525 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
SPIN3-223ENST00000639525 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
SPIN3-223ENST00000639525 CUX1P39880 1505 aa15.9■□□□□ 0.14
SPIN3-223ENST00000639525 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
SPIN3-223ENST00000639525 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
SPIN3-223ENST00000639525 LRRC9Q6ZRR7 1453 aa15.87■□□□□ 0.13
SPIN3-223ENST00000639525 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
SPIN3-223ENST00000639525 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
SPIN3-223ENST00000639525 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
SPIN3-223ENST00000639525 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
SPIN3-223ENST00000639525 FMN1Q68DA7 1419 aa15.83■□□□□ 0.13
SPIN3-223ENST00000639525 PKD2Q13563 968 aa15.83■□□□□ 0.13
SPIN3-223ENST00000639525 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
SPIN3-223ENST00000639525 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
SPIN3-223ENST00000639525 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
SPIN3-223ENST00000639525 BCL11AQ9H165 835 aa15.82■□□□□ 0.12
SPIN3-223ENST00000639525 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
SPIN3-223ENST00000639525 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
SPIN3-223ENST00000639525 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
SPIN3-223ENST00000639525 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
SPIN3-223ENST00000639525 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
SPIN3-223ENST00000639525 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
SPIN3-223ENST00000639525 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
SPIN3-223ENST00000639525 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
SPIN3-223ENST00000639525 CFTRP13569 1480 aa15.78■□□□□ 0.12
SPIN3-223ENST00000639525 PRKRIP1Q9H875 184 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-223ENST00000639525 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
SPIN3-223ENST00000639525 CHGAP10645 457 aaKnown RBP15.76■□□□□ 0.11
SPIN3-223ENST00000639525 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
SPIN3-223ENST00000639525 NESP48681 1621 aa15.74■□□□□ 0.11
SPIN3-223ENST00000639525 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
SPIN3-223ENST00000639525 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
SPIN3-223ENST00000639525 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
SPIN3-223ENST00000639525 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
SPIN3-223ENST00000639525 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
SPIN3-223ENST00000639525 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
SPIN3-223ENST00000639525 UACAQ9BZF9 1416 aa15.67■□□□□ 0.1
SPIN3-223ENST00000639525 ST20-MTHFSA0A0A6YYL1 179 aa15.67■□□□□ 0.1
SPIN3-223ENST00000639525 HNRNPMP52272 730 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPIN3-223ENST00000639525 WDR43Q15061 677 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPIN3-223ENST00000639525 NUP155O75694 1391 aa15.66■□□□□ 0.1
SPIN3-223ENST00000639525 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
SPIN3-223ENST00000639525 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
SPIN3-223ENST00000639525 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
SPIN3-223ENST00000639525 CASKIN1Q8WXD9 1431 aa15.64■□□□□ 0.09
SPIN3-223ENST00000639525 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
SPIN3-223ENST00000639525 DEKP35659 375 aaKnown RBP15.62■□□□□ 0.09
SPIN3-223ENST00000639525 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
SPIN3-223ENST00000639525 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
SPIN3-223ENST00000639525 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
SPIN3-223ENST00000639525 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
SPIN3-223ENST00000639525 ARXQ96QS3 562 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms