RNA–Protein interactions for RNA: ENST00000639525.1

SPIN3-223, Transcript of spindlin family member 3, humanhuman

TSL 5 BASIC

Gene SPIN3, Length 3,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-223ENST00000639525 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
SPIN3-223ENST00000639525 DCAF8L2P0C7V8 631 aa20.57■□□□□ 0.88
SPIN3-223ENST00000639525 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
SPIN3-223ENST00000639525 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
SPIN3-223ENST00000639525 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
SPIN3-223ENST00000639525 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
SPIN3-223ENST00000639525 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
SPIN3-223ENST00000639525 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
SPIN3-223ENST00000639525 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
SPIN3-223ENST00000639525 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
SPIN3-223ENST00000639525 HRCP23327 699 aa18.83■□□□□ 0.61
SPIN3-223ENST00000639525 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
SPIN3-223ENST00000639525 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
SPIN3-223ENST00000639525 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
SPIN3-223ENST00000639525 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
SPIN3-223ENST00000639525 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
SPIN3-223ENST00000639525 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
SPIN3-223ENST00000639525 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
SPIN3-223ENST00000639525 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
SPIN3-223ENST00000639525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
SPIN3-223ENST00000639525 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
SPIN3-223ENST00000639525 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
SPIN3-223ENST00000639525 APLP2Q06481 763 aa17.98■□□□□ 0.47
SPIN3-223ENST00000639525 ABCC9O60706 1549 aa17.96■□□□□ 0.47
SPIN3-223ENST00000639525 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
SPIN3-223ENST00000639525 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-223ENST00000639525 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
SPIN3-223ENST00000639525 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
SPIN3-223ENST00000639525 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
SPIN3-223ENST00000639525 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPIN3-223ENST00000639525 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
SPIN3-223ENST00000639525 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
SPIN3-223ENST00000639525 ITGAEP38570 1179 aa17.63■□□□□ 0.41
SPIN3-223ENST00000639525 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
SPIN3-223ENST00000639525 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
SPIN3-223ENST00000639525 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
SPIN3-223ENST00000639525 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
SPIN3-223ENST00000639525 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
SPIN3-223ENST00000639525 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
SPIN3-223ENST00000639525 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
SPIN3-223ENST00000639525 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
SPIN3-223ENST00000639525 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
SPIN3-223ENST00000639525 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.37
SPIN3-223ENST00000639525 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
SPIN3-223ENST00000639525 MIER1Q8N108 512 aa17.16■□□□□ 0.34
SPIN3-223ENST00000639525 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
SPIN3-223ENST00000639525 SOGA1O94964 1423 aa17.12■□□□□ 0.33
SPIN3-223ENST00000639525 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
SPIN3-223ENST00000639525 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
SPIN3-223ENST00000639525 BCANQ96GW7 911 aa17.1■□□□□ 0.33
SPIN3-223ENST00000639525 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-223ENST00000639525 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
SPIN3-223ENST00000639525 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
SPIN3-223ENST00000639525 WIZO95785 1651 aa17■□□□□ 0.31
SPIN3-223ENST00000639525 NEFLP07196 543 aa16.98■□□□□ 0.31
SPIN3-223ENST00000639525 CLIP1P30622 1438 aa16.95■□□□□ 0.3
SPIN3-223ENST00000639525 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
SPIN3-223ENST00000639525 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
SPIN3-223ENST00000639525 NACADO15069 1562 aa16.92■□□□□ 0.3
SPIN3-223ENST00000639525 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
SPIN3-223ENST00000639525 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
SPIN3-223ENST00000639525 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
SPIN3-223ENST00000639525 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
SPIN3-223ENST00000639525 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
SPIN3-223ENST00000639525 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
SPIN3-223ENST00000639525 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
SPIN3-223ENST00000639525 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.27
SPIN3-223ENST00000639525 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-223ENST00000639525 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
SPIN3-223ENST00000639525 EEA1Q15075 1411 aa16.73■□□□□ 0.27
SPIN3-223ENST00000639525 MYT1Q01538 1121 aa16.72■□□□□ 0.27
SPIN3-223ENST00000639525 FKBP8Q14318 412 aa16.7■□□□□ 0.26
SPIN3-223ENST00000639525 ANP32CO43423 234 aa16.68■□□□□ 0.26
SPIN3-223ENST00000639525 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
SPIN3-223ENST00000639525 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
SPIN3-223ENST00000639525 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
SPIN3-223ENST00000639525 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
SPIN3-223ENST00000639525 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
SPIN3-223ENST00000639525 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.24
SPIN3-223ENST00000639525 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
SPIN3-223ENST00000639525 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
SPIN3-223ENST00000639525 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
SPIN3-223ENST00000639525 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
SPIN3-223ENST00000639525 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
SPIN3-223ENST00000639525 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.24
SPIN3-223ENST00000639525 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPIN3-223ENST00000639525 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
SPIN3-223ENST00000639525 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
SPIN3-223ENST00000639525 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
SPIN3-223ENST00000639525 RRP7BPQ9NSQ0 103 aa16.46■□□□□ 0.23
SPIN3-223ENST00000639525 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
SPIN3-223ENST00000639525 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
SPIN3-223ENST00000639525 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
SPIN3-223ENST00000639525 FBLN2P98095 1184 aa16.43■□□□□ 0.22
SPIN3-223ENST00000639525 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
SPIN3-223ENST00000639525 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
SPIN3-223ENST00000639525 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
SPIN3-223ENST00000639525 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
SPIN3-223ENST00000639525 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-223ENST00000639525 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms