RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
KCNMA1-262ENST00000639489 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
KCNMA1-262ENST00000639489 NEFMP07197 916 aa20.28■□□□□ 0.84
KCNMA1-262ENST00000639489 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
KCNMA1-262ENST00000639489 TMC1Q8TDI8 760 aa20.27■□□□□ 0.84
KCNMA1-262ENST00000639489 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
KCNMA1-262ENST00000639489 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
KCNMA1-262ENST00000639489 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
KCNMA1-262ENST00000639489 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
KCNMA1-262ENST00000639489 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
KCNMA1-262ENST00000639489 CUX2O14529 1486 aa20.23■□□□□ 0.83
KCNMA1-262ENST00000639489 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
KCNMA1-262ENST00000639489 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
KCNMA1-262ENST00000639489 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
KCNMA1-262ENST00000639489 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-262ENST00000639489 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
KCNMA1-262ENST00000639489 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
KCNMA1-262ENST00000639489 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
KCNMA1-262ENST00000639489 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
KCNMA1-262ENST00000639489 WIZO95785 1651 aa20.12■□□□□ 0.81
KCNMA1-262ENST00000639489 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
KCNMA1-262ENST00000639489 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
KCNMA1-262ENST00000639489 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
KCNMA1-262ENST00000639489 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
KCNMA1-262ENST00000639489 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
KCNMA1-262ENST00000639489 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
KCNMA1-262ENST00000639489 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
KCNMA1-262ENST00000639489 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
KCNMA1-262ENST00000639489 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
KCNMA1-262ENST00000639489 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
KCNMA1-262ENST00000639489 CARD11Q9BXL7 1154 aa19.98■□□□□ 0.79
KCNMA1-262ENST00000639489 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
KCNMA1-262ENST00000639489 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
KCNMA1-262ENST00000639489 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
KCNMA1-262ENST00000639489 FOXD1Q16676 465 aa19.88■□□□□ 0.77
KCNMA1-262ENST00000639489 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
KCNMA1-262ENST00000639489 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
KCNMA1-262ENST00000639489 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
KCNMA1-262ENST00000639489 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
KCNMA1-262ENST00000639489 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
KCNMA1-262ENST00000639489 DCAF11Q8TEB1 546 aa19.83■□□□□ 0.77
KCNMA1-262ENST00000639489 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.76
KCNMA1-262ENST00000639489 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
KCNMA1-262ENST00000639489 SETD5Q9C0A6 1442 aa19.82■□□□□ 0.76
KCNMA1-262ENST00000639489 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
KCNMA1-262ENST00000639489 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
KCNMA1-262ENST00000639489 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
KCNMA1-262ENST00000639489 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
KCNMA1-262ENST00000639489 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
KCNMA1-262ENST00000639489 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
KCNMA1-262ENST00000639489 PKD2Q13563 968 aa19.75■□□□□ 0.75
KCNMA1-262ENST00000639489 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
KCNMA1-262ENST00000639489 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
KCNMA1-262ENST00000639489 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
KCNMA1-262ENST00000639489 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
KCNMA1-262ENST00000639489 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
KCNMA1-262ENST00000639489 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
KCNMA1-262ENST00000639489 HSP90AA1P07900 732 aaKnown RBP19.72■□□□□ 0.75
KCNMA1-262ENST00000639489 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
KCNMA1-262ENST00000639489 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
KCNMA1-262ENST00000639489 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
KCNMA1-262ENST00000639489 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
KCNMA1-262ENST00000639489 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
KCNMA1-262ENST00000639489 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
KCNMA1-262ENST00000639489 NBR1Q14596 966 aa19.67■□□□□ 0.74
KCNMA1-262ENST00000639489 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
KCNMA1-262ENST00000639489 GGT6Q6P531 493 aa19.65■□□□□ 0.74
KCNMA1-262ENST00000639489 MLECQ14165 292 aa19.64■□□□□ 0.73
KCNMA1-262ENST00000639489 POGKQ9P215 609 aa19.63■□□□□ 0.73
KCNMA1-262ENST00000639489 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
KCNMA1-262ENST00000639489 JPH4Q96JJ6 628 aa19.61■□□□□ 0.73
KCNMA1-262ENST00000639489 NUP155O75694 1391 aa19.61■□□□□ 0.73
KCNMA1-262ENST00000639489 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
KCNMA1-262ENST00000639489 HNRNPMP52272 730 aaKnown RBP eCLIP19.59■□□□□ 0.73
KCNMA1-262ENST00000639489 TMF1P82094 1093 aa19.58■□□□□ 0.73
KCNMA1-262ENST00000639489 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.72
KCNMA1-262ENST00000639489 L3MBTL2Q969R5 705 aa19.57■□□□□ 0.72
KCNMA1-262ENST00000639489 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
KCNMA1-262ENST00000639489 A0A0G2JS52 829 aa19.53■□□□□ 0.72
KCNMA1-262ENST00000639489 B4GALNT3Q6L9W6 998 aa19.53■□□□□ 0.72
KCNMA1-262ENST00000639489 KANK1Q14678 1352 aa19.52■□□□□ 0.71
KCNMA1-262ENST00000639489 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
KCNMA1-262ENST00000639489 IGF1RP08069 1367 aa19.51■□□□□ 0.71
KCNMA1-262ENST00000639489 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
KCNMA1-262ENST00000639489 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
KCNMA1-262ENST00000639489 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
KCNMA1-262ENST00000639489 ARXQ96QS3 562 aa19.5■□□□□ 0.71
KCNMA1-262ENST00000639489 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-262ENST00000639489 MYH16Q9H6N6 1097 aa19.5■□□□□ 0.71
KCNMA1-262ENST00000639489 STK26Q9P289 416 aa19.48■□□□□ 0.71
KCNMA1-262ENST00000639489 MAPK8IP3Q9UPT6 1336 aa19.48■□□□□ 0.71
KCNMA1-262ENST00000639489 KIF3BO15066 747 aa19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 LMOD2Q6P5Q4 547 aa19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 PPP4R2Q9NY27 417 aa19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 SRPK2P78362 688 aaKnown RBP19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
KCNMA1-262ENST00000639489 SOX12O15370 315 aa19.44■□□□□ 0.7
KCNMA1-262ENST00000639489 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-262ENST00000639489 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms