RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
RTTN-215ENST00000639487 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
RTTN-215ENST00000639487 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
RTTN-215ENST00000639487 KIAA0586Q9BVV6 1533 aa12.06□□□□□ -0.48
RTTN-215ENST00000639487 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
RTTN-215ENST00000639487 KIF13AQ9H1H9 1805 aa12.04□□□□□ -0.48
RTTN-215ENST00000639487 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
RTTN-215ENST00000639487 PPRC1Q5VV67 1664 aaKnown RBP12.01□□□□□ -0.49
RTTN-215ENST00000639487 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
RTTN-215ENST00000639487 SOGA1O94964 1423 aa11.97□□□□□ -0.49
RTTN-215ENST00000639487 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
RTTN-215ENST00000639487 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
RTTN-215ENST00000639487 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.5
RTTN-215ENST00000639487 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
RTTN-215ENST00000639487 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
RTTN-215ENST00000639487 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
RTTN-215ENST00000639487 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
RTTN-215ENST00000639487 DISP1Q96F81 1524 aa11.9□□□□□ -0.5
RTTN-215ENST00000639487 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
RTTN-215ENST00000639487 RAPGEF6Q8TEU7 1601 aa11.88□□□□□ -0.51
RTTN-215ENST00000639487 CROCC2H7BZ55 1655 aa11.88□□□□□ -0.51
RTTN-215ENST00000639487 MAST1Q9Y2H9 1570 aa11.88□□□□□ -0.51
RTTN-215ENST00000639487 HECW1Q76N89 1606 aa11.88□□□□□ -0.51
RTTN-215ENST00000639487 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
RTTN-215ENST00000639487 ZCCHC11Q5TAX3 1644 aaKnown RBP11.87□□□□□ -0.51
RTTN-215ENST00000639487 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
RTTN-215ENST00000639487 KDM5AP29375 1690 aaKnown RBP11.85□□□□□ -0.51
RTTN-215ENST00000639487 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
RTTN-215ENST00000639487 IGF1RP08069 1367 aa11.83□□□□□ -0.52
RTTN-215ENST00000639487 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
RTTN-215ENST00000639487 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
RTTN-215ENST00000639487 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
RTTN-215ENST00000639487 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
RTTN-215ENST00000639487 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
RTTN-215ENST00000639487 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
RTTN-215ENST00000639487 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
RTTN-215ENST00000639487 NEURL4Q96JN8 1562 aa11.76□□□□□ -0.53
RTTN-215ENST00000639487 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
RTTN-215ENST00000639487 RICTORQ6R327 1708 aa11.75□□□□□ -0.53
RTTN-215ENST00000639487 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
RTTN-215ENST00000639487 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
RTTN-215ENST00000639487 ZC3H13Q5T200 1668 aaKnown RBP11.73□□□□□ -0.53
RTTN-215ENST00000639487 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
RTTN-215ENST00000639487 KDM5CP41229 1560 aa11.72□□□□□ -0.53
RTTN-215ENST00000639487 ADGBQ8N7X0 1667 aa11.71□□□□□ -0.53
RTTN-215ENST00000639487 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.54
RTTN-215ENST00000639487 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
RTTN-215ENST00000639487 DEPDC5O75140 1603 aa11.7□□□□□ -0.54
RTTN-215ENST00000639487 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
RTTN-215ENST00000639487 PCF11O94913 1555 aaKnown RBP11.68□□□□□ -0.54
RTTN-215ENST00000639487 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
RTTN-215ENST00000639487 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
RTTN-215ENST00000639487 CDC42BPBQ9Y5S2 1711 aa11.64□□□□□ -0.55
RTTN-215ENST00000639487 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
RTTN-215ENST00000639487 INO80Q9ULG1 1556 aaPredicted RBP11.64□□□□□ -0.55
RTTN-215ENST00000639487 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
RTTN-215ENST00000639487 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
RTTN-215ENST00000639487 CASKIN1Q8WXD9 1431 aa11.61□□□□□ -0.55
RTTN-215ENST00000639487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
RTTN-215ENST00000639487 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
RTTN-215ENST00000639487 ZNF142P52746 1687 aaPredicted RBP11.59□□□□□ -0.55
RTTN-215ENST00000639487 NEO1Q92859 1461 aa11.59□□□□□ -0.55
RTTN-215ENST00000639487 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
RTTN-215ENST00000639487 SUPT6HQ7KZ85 1726 aaKnown RBP11.59□□□□□ -0.55
RTTN-215ENST00000639487 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
RTTN-215ENST00000639487 CAMSAP2Q08AD1 1489 aa11.58□□□□□ -0.56
RTTN-215ENST00000639487 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
RTTN-215ENST00000639487 SHANK2Q9UPX8 1470 aa11.58□□□□□ -0.56
RTTN-215ENST00000639487 AGLP35573 1532 aa11.58□□□□□ -0.56
RTTN-215ENST00000639487 KDM5DQ9BY66 1539 aa11.57□□□□□ -0.56
RTTN-215ENST00000639487 CARMIL1Q5VZK9 1371 aa11.57□□□□□ -0.56
RTTN-215ENST00000639487 KIF14Q15058 1648 aa11.56□□□□□ -0.56
RTTN-215ENST00000639487 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
RTTN-215ENST00000639487 MAGI2Q86UL8 1455 aa11.56□□□□□ -0.56
RTTN-215ENST00000639487 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
RTTN-215ENST00000639487 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
RTTN-215ENST00000639487 FMN1Q68DA7 1419 aa11.53□□□□□ -0.56
RTTN-215ENST00000639487 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
RTTN-215ENST00000639487 ARHGEF40Q8TER5 1519 aa11.53□□□□□ -0.56
RTTN-215ENST00000639487 MROH1Q8NDA8 1641 aa11.52□□□□□ -0.57
RTTN-215ENST00000639487 VWDEQ8N2E2 1590 aa11.52□□□□□ -0.57
RTTN-215ENST00000639487 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
RTTN-215ENST00000639487 KDM6BO15054 1643 aa11.5□□□□□ -0.57
RTTN-215ENST00000639487 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
RTTN-215ENST00000639487 NUP153P49790 1475 aaKnown RBP11.49□□□□□ -0.57
RTTN-215ENST00000639487 ABCC1P33527 1531 aa11.49□□□□□ -0.57
RTTN-215ENST00000639487 UNC13BO14795 1591 aa11.49□□□□□ -0.57
RTTN-215ENST00000639487 UACAQ9BZF9 1416 aa11.48□□□□□ -0.57
RTTN-215ENST00000639487 EPRSP07814 1512 aaKnown RBP11.48□□□□□ -0.57
RTTN-215ENST00000639487 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
RTTN-215ENST00000639487 TEX14Q8IWB6 1497 aa11.47□□□□□ -0.57
RTTN-215ENST00000639487 CEP162Q5TB80 1403 aa11.47□□□□□ -0.57
RTTN-215ENST00000639487 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
RTTN-215ENST00000639487 FER1L4A9Z1Z3 1794 aa11.46□□□□□ -0.57
RTTN-215ENST00000639487 LMTK2Q8IWU2 1503 aa11.45□□□□□ -0.58
RTTN-215ENST00000639487 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
RTTN-215ENST00000639487 IQGAP3Q86VI3 1631 aa11.45□□□□□ -0.58
RTTN-215ENST00000639487 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
RTTN-215ENST00000639487 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
RTTN-215ENST00000639487 TTC37Q6PGP7 1564 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms