RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 BCANQ96GW7 911 aa17.53■□□□□ 0.4
SPIN3-215ENST00000638873 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
SPIN3-215ENST00000638873 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
SPIN3-215ENST00000638873 FKBP8Q14318 412 aa17.5■□□□□ 0.39
SPIN3-215ENST00000638873 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
SPIN3-215ENST00000638873 ITGAEP38570 1179 aa17.49■□□□□ 0.39
SPIN3-215ENST00000638873 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
SPIN3-215ENST00000638873 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
SPIN3-215ENST00000638873 IGF1RP08069 1367 aa17.46■□□□□ 0.39
SPIN3-215ENST00000638873 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
SPIN3-215ENST00000638873 NEFLP07196 543 aa17.45■□□□□ 0.38
SPIN3-215ENST00000638873 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
SPIN3-215ENST00000638873 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
SPIN3-215ENST00000638873 BCL11AQ9H165 835 aa17.44■□□□□ 0.38
SPIN3-215ENST00000638873 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
SPIN3-215ENST00000638873 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
SPIN3-215ENST00000638873 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
SPIN3-215ENST00000638873 FBLN2P98095 1184 aa17.41■□□□□ 0.38
SPIN3-215ENST00000638873 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
SPIN3-215ENST00000638873 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
SPIN3-215ENST00000638873 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
SPIN3-215ENST00000638873 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
SPIN3-215ENST00000638873 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
SPIN3-215ENST00000638873 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
SPIN3-215ENST00000638873 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPIN3-215ENST00000638873 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
SPIN3-215ENST00000638873 PPP1R15AO75807 674 aaPredicted RBP17.33■□□□□ 0.37
SPIN3-215ENST00000638873 CCER2I3L3R5 266 aa17.33■□□□□ 0.36
SPIN3-215ENST00000638873 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
SPIN3-215ENST00000638873 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
SPIN3-215ENST00000638873 ANP32CO43423 234 aa17.31■□□□□ 0.36
SPIN3-215ENST00000638873 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
SPIN3-215ENST00000638873 TRIM52Q96A61 297 aa17.3■□□□□ 0.36
SPIN3-215ENST00000638873 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
SPIN3-215ENST00000638873 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
SPIN3-215ENST00000638873 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
SPIN3-215ENST00000638873 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
SPIN3-215ENST00000638873 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
SPIN3-215ENST00000638873 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
SPIN3-215ENST00000638873 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
SPIN3-215ENST00000638873 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
SPIN3-215ENST00000638873 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
SPIN3-215ENST00000638873 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
SPIN3-215ENST00000638873 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
SPIN3-215ENST00000638873 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
SPIN3-215ENST00000638873 MSH5O43196 834 aa17.15■□□□□ 0.34
SPIN3-215ENST00000638873 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
SPIN3-215ENST00000638873 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
SPIN3-215ENST00000638873 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-215ENST00000638873 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
SPIN3-215ENST00000638873 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
SPIN3-215ENST00000638873 CFAP43Q8NDM7 1665 aa17.09■□□□□ 0.33
SPIN3-215ENST00000638873 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPIN3-215ENST00000638873 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
SPIN3-215ENST00000638873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPIN3-215ENST00000638873 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
SPIN3-215ENST00000638873 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
SPIN3-215ENST00000638873 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
SPIN3-215ENST00000638873 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
SPIN3-215ENST00000638873 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
SPIN3-215ENST00000638873 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
SPIN3-215ENST00000638873 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
SPIN3-215ENST00000638873 WDR62O43379 1518 aa17■□□□□ 0.31
SPIN3-215ENST00000638873 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
SPIN3-215ENST00000638873 CCDC18Q5T9S5 1454 aa16.99■□□□□ 0.31
SPIN3-215ENST00000638873 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
SPIN3-215ENST00000638873 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
SPIN3-215ENST00000638873 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
SPIN3-215ENST00000638873 PPP4R2Q9NY27 417 aa16.96■□□□□ 0.31
SPIN3-215ENST00000638873 FGD6Q6ZV73 1430 aa16.95■□□□□ 0.3
SPIN3-215ENST00000638873 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
SPIN3-215ENST00000638873 CUL7Q14999 1698 aa16.94■□□□□ 0.3
SPIN3-215ENST00000638873 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
SPIN3-215ENST00000638873 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
SPIN3-215ENST00000638873 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
SPIN3-215ENST00000638873 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
SPIN3-215ENST00000638873 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
SPIN3-215ENST00000638873 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
SPIN3-215ENST00000638873 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
SPIN3-215ENST00000638873 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
SPIN3-215ENST00000638873 MTUS2Q5JR59 1369 aa16.87■□□□□ 0.29
SPIN3-215ENST00000638873 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
SPIN3-215ENST00000638873 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
SPIN3-215ENST00000638873 KDM5BQ9UGL1 1544 aa16.86■□□□□ 0.29
SPIN3-215ENST00000638873 NAIPQ13075 1403 aa16.86■□□□□ 0.29
SPIN3-215ENST00000638873 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
SPIN3-215ENST00000638873 EIF4G2P78344 907 aaKnown RBP eCLIP16.84■□□□□ 0.29
SPIN3-215ENST00000638873 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
SPIN3-215ENST00000638873 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.29
SPIN3-215ENST00000638873 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
SPIN3-215ENST00000638873 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
SPIN3-215ENST00000638873 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
SPIN3-215ENST00000638873 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
SPIN3-215ENST00000638873 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
SPIN3-215ENST00000638873 FAM9BQ8IZU0 186 aa16.81■□□□□ 0.28
SPIN3-215ENST00000638873 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
SPIN3-215ENST00000638873 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
SPIN3-215ENST00000638873 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
SPIN3-215ENST00000638873 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
SPIN3-215ENST00000638873 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms