RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
SPIN3-215ENST00000638873 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
SPIN3-215ENST00000638873 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
SPIN3-215ENST00000638873 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
SPIN3-215ENST00000638873 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
SPIN3-215ENST00000638873 HRCP23327 699 aa20.57■□□□□ 0.88
SPIN3-215ENST00000638873 ABCC9O60706 1549 aa20.45■□□□□ 0.86
SPIN3-215ENST00000638873 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
SPIN3-215ENST00000638873 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.84
SPIN3-215ENST00000638873 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
SPIN3-215ENST00000638873 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
SPIN3-215ENST00000638873 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
SPIN3-215ENST00000638873 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
SPIN3-215ENST00000638873 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
SPIN3-215ENST00000638873 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
SPIN3-215ENST00000638873 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
SPIN3-215ENST00000638873 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
SPIN3-215ENST00000638873 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
SPIN3-215ENST00000638873 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
SPIN3-215ENST00000638873 NACADO15069 1562 aa19.54■□□□□ 0.72
SPIN3-215ENST00000638873 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
SPIN3-215ENST00000638873 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SPIN3-215ENST00000638873 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.67
SPIN3-215ENST00000638873 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
SPIN3-215ENST00000638873 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
SPIN3-215ENST00000638873 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
SPIN3-215ENST00000638873 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
SPIN3-215ENST00000638873 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
SPIN3-215ENST00000638873 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
SPIN3-215ENST00000638873 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
SPIN3-215ENST00000638873 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
SPIN3-215ENST00000638873 WIZO95785 1651 aa18.9■□□□□ 0.62
SPIN3-215ENST00000638873 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
SPIN3-215ENST00000638873 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
SPIN3-215ENST00000638873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
SPIN3-215ENST00000638873 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
SPIN3-215ENST00000638873 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-215ENST00000638873 MYT1Q01538 1121 aa18.76■□□□□ 0.59
SPIN3-215ENST00000638873 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
SPIN3-215ENST00000638873 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
SPIN3-215ENST00000638873 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
SPIN3-215ENST00000638873 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
SPIN3-215ENST00000638873 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
SPIN3-215ENST00000638873 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
SPIN3-215ENST00000638873 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
SPIN3-215ENST00000638873 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
SPIN3-215ENST00000638873 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
SPIN3-215ENST00000638873 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
SPIN3-215ENST00000638873 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
SPIN3-215ENST00000638873 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
SPIN3-215ENST00000638873 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
SPIN3-215ENST00000638873 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
SPIN3-215ENST00000638873 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
SPIN3-215ENST00000638873 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
SPIN3-215ENST00000638873 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
SPIN3-215ENST00000638873 SOGA1O94964 1423 aa18.27■□□□□ 0.51
SPIN3-215ENST00000638873 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.51
SPIN3-215ENST00000638873 EEA1Q15075 1411 aa18.26■□□□□ 0.51
SPIN3-215ENST00000638873 MIER1Q8N108 512 aa18.26■□□□□ 0.51
SPIN3-215ENST00000638873 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
SPIN3-215ENST00000638873 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
SPIN3-215ENST00000638873 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-215ENST00000638873 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SPIN3-215ENST00000638873 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
SPIN3-215ENST00000638873 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
SPIN3-215ENST00000638873 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
SPIN3-215ENST00000638873 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
SPIN3-215ENST00000638873 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.48
SPIN3-215ENST00000638873 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
SPIN3-215ENST00000638873 APLP2Q06481 763 aa18■□□□□ 0.47
SPIN3-215ENST00000638873 CLIP1P30622 1438 aa18■□□□□ 0.47
SPIN3-215ENST00000638873 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
SPIN3-215ENST00000638873 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
SPIN3-215ENST00000638873 KIF21BO75037 1637 aa17.95■□□□□ 0.46
SPIN3-215ENST00000638873 NESP48681 1621 aa17.95■□□□□ 0.46
SPIN3-215ENST00000638873 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
SPIN3-215ENST00000638873 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
SPIN3-215ENST00000638873 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
SPIN3-215ENST00000638873 CFTRP13569 1480 aa17.85■□□□□ 0.45
SPIN3-215ENST00000638873 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
SPIN3-215ENST00000638873 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
SPIN3-215ENST00000638873 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
SPIN3-215ENST00000638873 CUX1P39880 1505 aa17.75■□□□□ 0.43
SPIN3-215ENST00000638873 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
SPIN3-215ENST00000638873 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
SPIN3-215ENST00000638873 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
SPIN3-215ENST00000638873 CUX2O14529 1486 aa17.63■□□□□ 0.41
SPIN3-215ENST00000638873 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
SPIN3-215ENST00000638873 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
SPIN3-215ENST00000638873 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
SPIN3-215ENST00000638873 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
SPIN3-215ENST00000638873 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
SPIN3-215ENST00000638873 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
SPIN3-215ENST00000638873 P3H3Q8IVL6 736 aa17.58■□□□□ 0.4
SPIN3-215ENST00000638873 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
SPIN3-215ENST00000638873 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
SPIN3-215ENST00000638873 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
SPIN3-215ENST00000638873 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
SPIN3-215ENST00000638873 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
SPIN3-215ENST00000638873 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms