RNA–Protein interactions for RNA: ENST00000638351.1

KCNMA1-233, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-233ENST00000638351 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
KCNMA1-233ENST00000638351 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
KCNMA1-233ENST00000638351 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
KCNMA1-233ENST00000638351 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
KCNMA1-233ENST00000638351 KIF21BO75037 1637 aa18.17■□□□□ 0.5
KCNMA1-233ENST00000638351 CUX1P39880 1505 aa18.16■□□□□ 0.5
KCNMA1-233ENST00000638351 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
KCNMA1-233ENST00000638351 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
KCNMA1-233ENST00000638351 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
KCNMA1-233ENST00000638351 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
KCNMA1-233ENST00000638351 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
KCNMA1-233ENST00000638351 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
KCNMA1-233ENST00000638351 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
KCNMA1-233ENST00000638351 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
KCNMA1-233ENST00000638351 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
KCNMA1-233ENST00000638351 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
KCNMA1-233ENST00000638351 FBLN2P98095 1184 aa18.05■□□□□ 0.48
KCNMA1-233ENST00000638351 FOXD1Q16676 465 aa18.03■□□□□ 0.48
KCNMA1-233ENST00000638351 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.48
KCNMA1-233ENST00000638351 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
KCNMA1-233ENST00000638351 NBR1Q14596 966 aa17.99■□□□□ 0.47
KCNMA1-233ENST00000638351 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
KCNMA1-233ENST00000638351 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-233ENST00000638351 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
KCNMA1-233ENST00000638351 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
KCNMA1-233ENST00000638351 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
KCNMA1-233ENST00000638351 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
KCNMA1-233ENST00000638351 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
KCNMA1-233ENST00000638351 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
KCNMA1-233ENST00000638351 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-233ENST00000638351 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
KCNMA1-233ENST00000638351 NESP48681 1621 aa17.91■□□□□ 0.46
KCNMA1-233ENST00000638351 CUX2O14529 1486 aa17.9■□□□□ 0.46
KCNMA1-233ENST00000638351 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
KCNMA1-233ENST00000638351 TOPBP1Q92547 1522 aa17.89■□□□□ 0.46
KCNMA1-233ENST00000638351 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
KCNMA1-233ENST00000638351 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
KCNMA1-233ENST00000638351 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
KCNMA1-233ENST00000638351 ABCA10Q8WWZ4 1543 aa17.83■□□□□ 0.45
KCNMA1-233ENST00000638351 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
KCNMA1-233ENST00000638351 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
KCNMA1-233ENST00000638351 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
KCNMA1-233ENST00000638351 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
KCNMA1-233ENST00000638351 IGF1RP08069 1367 aa17.79■□□□□ 0.44
KCNMA1-233ENST00000638351 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
KCNMA1-233ENST00000638351 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
KCNMA1-233ENST00000638351 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
KCNMA1-233ENST00000638351 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.43
KCNMA1-233ENST00000638351 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
KCNMA1-233ENST00000638351 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
KCNMA1-233ENST00000638351 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
KCNMA1-233ENST00000638351 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
KCNMA1-233ENST00000638351 CUL7Q14999 1698 aa17.72■□□□□ 0.43
KCNMA1-233ENST00000638351 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
KCNMA1-233ENST00000638351 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
KCNMA1-233ENST00000638351 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.42
KCNMA1-233ENST00000638351 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
KCNMA1-233ENST00000638351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
KCNMA1-233ENST00000638351 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
KCNMA1-233ENST00000638351 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
KCNMA1-233ENST00000638351 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
KCNMA1-233ENST00000638351 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
KCNMA1-233ENST00000638351 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-233ENST00000638351 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
KCNMA1-233ENST00000638351 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
KCNMA1-233ENST00000638351 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
KCNMA1-233ENST00000638351 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-233ENST00000638351 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
KCNMA1-233ENST00000638351 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
KCNMA1-233ENST00000638351 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
KCNMA1-233ENST00000638351 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
KCNMA1-233ENST00000638351 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
KCNMA1-233ENST00000638351 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
KCNMA1-233ENST00000638351 WDR62O43379 1518 aa17.57■□□□□ 0.4
KCNMA1-233ENST00000638351 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
KCNMA1-233ENST00000638351 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-233ENST00000638351 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
KCNMA1-233ENST00000638351 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
KCNMA1-233ENST00000638351 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
KCNMA1-233ENST00000638351 EFCAB5A4FU69 1503 aa17.54■□□□□ 0.4
KCNMA1-233ENST00000638351 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
KCNMA1-233ENST00000638351 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.39
KCNMA1-233ENST00000638351 ERCC6Q03468 1493 aa17.52■□□□□ 0.39
KCNMA1-233ENST00000638351 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
KCNMA1-233ENST00000638351 ARXQ96QS3 562 aa17.5■□□□□ 0.39
KCNMA1-233ENST00000638351 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
KCNMA1-233ENST00000638351 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
KCNMA1-233ENST00000638351 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-233ENST00000638351 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-233ENST00000638351 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
KCNMA1-233ENST00000638351 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
KCNMA1-233ENST00000638351 GRIN2BQ13224 1484 aa17.46■□□□□ 0.38
KCNMA1-233ENST00000638351 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
KCNMA1-233ENST00000638351 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-233ENST00000638351 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-233ENST00000638351 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
KCNMA1-233ENST00000638351 PKD2Q13563 968 aa17.41■□□□□ 0.38
KCNMA1-233ENST00000638351 MSH5O43196 834 aa17.41■□□□□ 0.38
KCNMA1-233ENST00000638351 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-233ENST00000638351 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms