RNA–Protein interactions for RNA: ENST00000638351.1

KCNMA1-233, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-233ENST00000638351 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
KCNMA1-233ENST00000638351 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
KCNMA1-233ENST00000638351 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
KCNMA1-233ENST00000638351 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
KCNMA1-233ENST00000638351 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
KCNMA1-233ENST00000638351 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
KCNMA1-233ENST00000638351 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
KCNMA1-233ENST00000638351 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
KCNMA1-233ENST00000638351 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
KCNMA1-233ENST00000638351 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
KCNMA1-233ENST00000638351 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
KCNMA1-233ENST00000638351 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
KCNMA1-233ENST00000638351 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
KCNMA1-233ENST00000638351 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
KCNMA1-233ENST00000638351 HRCP23327 699 aa20.91■□□□□ 0.94
KCNMA1-233ENST00000638351 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
KCNMA1-233ENST00000638351 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
KCNMA1-233ENST00000638351 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
KCNMA1-233ENST00000638351 NACADO15069 1562 aa20.36■□□□□ 0.85
KCNMA1-233ENST00000638351 ABCC9O60706 1549 aa20.36■□□□□ 0.85
KCNMA1-233ENST00000638351 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
KCNMA1-233ENST00000638351 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.83
KCNMA1-233ENST00000638351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-233ENST00000638351 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-233ENST00000638351 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
KCNMA1-233ENST00000638351 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
KCNMA1-233ENST00000638351 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
KCNMA1-233ENST00000638351 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
KCNMA1-233ENST00000638351 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
KCNMA1-233ENST00000638351 APLP2Q06481 763 aa19.74■□□□□ 0.75
KCNMA1-233ENST00000638351 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
KCNMA1-233ENST00000638351 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-233ENST00000638351 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
KCNMA1-233ENST00000638351 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
KCNMA1-233ENST00000638351 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
KCNMA1-233ENST00000638351 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
KCNMA1-233ENST00000638351 ITGAEP38570 1179 aa19.55■□□□□ 0.72
KCNMA1-233ENST00000638351 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
KCNMA1-233ENST00000638351 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
KCNMA1-233ENST00000638351 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
KCNMA1-233ENST00000638351 ATP1B4Q9UN42 357 aaPredicted RBP19.47■□□□□ 0.71
KCNMA1-233ENST00000638351 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
KCNMA1-233ENST00000638351 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-233ENST00000638351 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
KCNMA1-233ENST00000638351 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
KCNMA1-233ENST00000638351 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-233ENST00000638351 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
KCNMA1-233ENST00000638351 WIZO95785 1651 aa19.26■□□□□ 0.67
KCNMA1-233ENST00000638351 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
KCNMA1-233ENST00000638351 ZNF316A6NFI3 1004 aaPredicted RBP19.15■□□□□ 0.66
KCNMA1-233ENST00000638351 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
KCNMA1-233ENST00000638351 BCANQ96GW7 911 aa19.13■□□□□ 0.65
KCNMA1-233ENST00000638351 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
KCNMA1-233ENST00000638351 MIER1Q8N108 512 aa19.09■□□□□ 0.65
KCNMA1-233ENST00000638351 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
KCNMA1-233ENST00000638351 SMARCA2P51531 1590 aa19■□□□□ 0.63
KCNMA1-233ENST00000638351 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
KCNMA1-233ENST00000638351 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
KCNMA1-233ENST00000638351 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
KCNMA1-233ENST00000638351 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
KCNMA1-233ENST00000638351 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
KCNMA1-233ENST00000638351 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
KCNMA1-233ENST00000638351 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
KCNMA1-233ENST00000638351 SOGA1O94964 1423 aa18.86■□□□□ 0.61
KCNMA1-233ENST00000638351 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
KCNMA1-233ENST00000638351 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
KCNMA1-233ENST00000638351 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
KCNMA1-233ENST00000638351 NEFLP07196 543 aa18.76■□□□□ 0.59
KCNMA1-233ENST00000638351 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
KCNMA1-233ENST00000638351 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
KCNMA1-233ENST00000638351 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
KCNMA1-233ENST00000638351 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
KCNMA1-233ENST00000638351 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
KCNMA1-233ENST00000638351 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
KCNMA1-233ENST00000638351 CLIP1P30622 1438 aa18.61■□□□□ 0.57
KCNMA1-233ENST00000638351 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
KCNMA1-233ENST00000638351 FKBP8Q14318 412 aa18.57■□□□□ 0.56
KCNMA1-233ENST00000638351 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
KCNMA1-233ENST00000638351 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
KCNMA1-233ENST00000638351 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
KCNMA1-233ENST00000638351 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.55
KCNMA1-233ENST00000638351 EEA1Q15075 1411 aa18.51■□□□□ 0.55
KCNMA1-233ENST00000638351 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
KCNMA1-233ENST00000638351 KCNH8Q96L42 1107 aa18.5■□□□□ 0.55
KCNMA1-233ENST00000638351 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
KCNMA1-233ENST00000638351 MYT1Q01538 1121 aa18.46■□□□□ 0.55
KCNMA1-233ENST00000638351 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
KCNMA1-233ENST00000638351 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
KCNMA1-233ENST00000638351 CFTRP13569 1480 aa18.39■□□□□ 0.53
KCNMA1-233ENST00000638351 ANP32CO43423 234 aa18.39■□□□□ 0.53
KCNMA1-233ENST00000638351 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
KCNMA1-233ENST00000638351 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
KCNMA1-233ENST00000638351 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
KCNMA1-233ENST00000638351 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
KCNMA1-233ENST00000638351 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
KCNMA1-233ENST00000638351 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
KCNMA1-233ENST00000638351 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
KCNMA1-233ENST00000638351 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
KCNMA1-233ENST00000638351 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
KCNMA1-233ENST00000638351 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms