RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
CLN8-209ENST00000635970 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
CLN8-209ENST00000635970 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
CLN8-209ENST00000635970 SHROOM2Q13796 1616 aa24.91■■□□□ 1.58
CLN8-209ENST00000635970 CTTNBP2Q8WZ74 1663 aa24.89■■□□□ 1.58
CLN8-209ENST00000635970 KIF21BO75037 1637 aa24.88■■□□□ 1.57
CLN8-209ENST00000635970 KIAA0586Q9BVV6 1533 aa24.88■■□□□ 1.57
CLN8-209ENST00000635970 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
CLN8-209ENST00000635970 IQGAP2Q13576 1575 aa24.84■■□□□ 1.57
CLN8-209ENST00000635970 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
CLN8-209ENST00000635970 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
CLN8-209ENST00000635970 PRG4Q92954 1404 aaPredicted RBP24.76■■□□□ 1.55
CLN8-209ENST00000635970 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
CLN8-209ENST00000635970 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
CLN8-209ENST00000635970 UGGT2Q9NYU1 1516 aa24.68■■□□□ 1.54
CLN8-209ENST00000635970 DISP1Q96F81 1524 aa24.64■■□□□ 1.53
CLN8-209ENST00000635970 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
CLN8-209ENST00000635970 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
CLN8-209ENST00000635970 KIAA0556O60303 1618 aa24.62■■□□□ 1.53
CLN8-209ENST00000635970 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
CLN8-209ENST00000635970 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
CLN8-209ENST00000635970 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
CLN8-209ENST00000635970 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
CLN8-209ENST00000635970 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
CLN8-209ENST00000635970 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
CLN8-209ENST00000635970 PTPRGP23470 1445 aa24.46■■□□□ 1.51
CLN8-209ENST00000635970 P3H3Q8IVL6 736 aa24.45■■□□□ 1.51
CLN8-209ENST00000635970 EFCAB5A4FU69 1503 aa24.43■■□□□ 1.5
CLN8-209ENST00000635970 ADCY10Q96PN6 1610 aa24.42■■□□□ 1.5
CLN8-209ENST00000635970 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
CLN8-209ENST00000635970 FHOD3Q2V2M9 1422 aa24.4■■□□□ 1.5
CLN8-209ENST00000635970 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
CLN8-209ENST00000635970 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
CLN8-209ENST00000635970 UACAQ9BZF9 1416 aa24.32■■□□□ 1.48
CLN8-209ENST00000635970 ABCC2Q92887 1545 aa24.32■■□□□ 1.48
CLN8-209ENST00000635970 ABCA8O94911 1581 aa24.31■■□□□ 1.48
CLN8-209ENST00000635970 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
CLN8-209ENST00000635970 CLIP1P30622 1438 aa24.28■■□□□ 1.48
CLN8-209ENST00000635970 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
CLN8-209ENST00000635970 RAPGEF6Q8TEU7 1601 aa24.26■■□□□ 1.47
CLN8-209ENST00000635970 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
CLN8-209ENST00000635970 ZCCHC11Q5TAX3 1644 aaKnown RBP24.22■■□□□ 1.47
CLN8-209ENST00000635970 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
CLN8-209ENST00000635970 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
CLN8-209ENST00000635970 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
CLN8-209ENST00000635970 NPM1P06748 294 aaKnown RBP eCLIP24.16■■□□□ 1.46
CLN8-209ENST00000635970 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
CLN8-209ENST00000635970 NUP153P49790 1475 aaKnown RBP24.15■■□□□ 1.46
CLN8-209ENST00000635970 ARID3CA6NKF2 412 aa24.14■■□□□ 1.46
CLN8-209ENST00000635970 PCF11O94913 1555 aaKnown RBP24.13■■□□□ 1.45
CLN8-209ENST00000635970 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
CLN8-209ENST00000635970 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
CLN8-209ENST00000635970 HECW1Q76N89 1606 aa24.1■■□□□ 1.45
CLN8-209ENST00000635970 ATP10BO94823 1461 aa24.08■■□□□ 1.45
CLN8-209ENST00000635970 ASXL2Q76L83 1435 aa24.08■■□□□ 1.44
CLN8-209ENST00000635970 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
CLN8-209ENST00000635970 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
CLN8-209ENST00000635970 TRHP20396 242 aaPredicted RBP24.04■■□□□ 1.44
CLN8-209ENST00000635970 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
CLN8-209ENST00000635970 ATP1B4Q9UN42 357 aaPredicted RBP24.03■■□□□ 1.44
CLN8-209ENST00000635970 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
CLN8-209ENST00000635970 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
CLN8-209ENST00000635970 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
CLN8-209ENST00000635970 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
CLN8-209ENST00000635970 WDR7Q9Y4E6 1490 aa23.99■■□□□ 1.43
CLN8-209ENST00000635970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
CLN8-209ENST00000635970 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
CLN8-209ENST00000635970 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
CLN8-209ENST00000635970 FAM69CQ0P6D2 419 aa23.92■■□□□ 1.42
CLN8-209ENST00000635970 CCDC18Q5T9S5 1454 aa23.9■■□□□ 1.42
CLN8-209ENST00000635970 TSPOAP1O95153 1857 aa23.89■■□□□ 1.41
CLN8-209ENST00000635970 GLI2P10070 1586 aa23.88■■□□□ 1.41
CLN8-209ENST00000635970 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
CLN8-209ENST00000635970 MAP3K4Q9Y6R4 1608 aa23.85■■□□□ 1.41
CLN8-209ENST00000635970 MAGI3Q5TCQ9 1506 aa23.84■■□□□ 1.41
CLN8-209ENST00000635970 PLEKHD1A6NEE1 506 aa23.83■■□□□ 1.41
CLN8-209ENST00000635970 CFAP43Q8NDM7 1665 aa23.82■■□□□ 1.4
CLN8-209ENST00000635970 PPRC1Q5VV67 1664 aaKnown RBP23.81■■□□□ 1.4
CLN8-209ENST00000635970 KIF14Q15058 1648 aa23.8■■□□□ 1.4
CLN8-209ENST00000635970 ABCA9Q8IUA7 1624 aa23.8■■□□□ 1.4
CLN8-209ENST00000635970 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
CLN8-209ENST00000635970 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
CLN8-209ENST00000635970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.395e-6■□□□□ 9.5
CLN8-209ENST00000635970 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
CLN8-209ENST00000635970 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
CLN8-209ENST00000635970 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
CLN8-209ENST00000635970 EHBP1L1Q8N3D4 1523 aa23.68■■□□□ 1.38
CLN8-209ENST00000635970 MTUS2Q5JR59 1369 aa23.67■■□□□ 1.38
CLN8-209ENST00000635970 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
CLN8-209ENST00000635970 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
CLN8-209ENST00000635970 MAP3K1Q13233 1512 aa23.65■■□□□ 1.38
CLN8-209ENST00000635970 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
CLN8-209ENST00000635970 LRRC9Q6ZRR7 1453 aa23.62■■□□□ 1.37
CLN8-209ENST00000635970 CDC42BPAQ5VT25 1732 aa23.61■■□□□ 1.37
CLN8-209ENST00000635970 SUPT6HQ7KZ85 1726 aaKnown RBP23.6■■□□□ 1.37
CLN8-209ENST00000635970 CDC42BPBQ9Y5S2 1711 aa23.6■■□□□ 1.37
CLN8-209ENST00000635970 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
CLN8-209ENST00000635970 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
CLN8-209ENST00000635970 KDM6BO15054 1643 aa23.58■■□□□ 1.37
CLN8-209ENST00000635970 APLP2Q06481 763 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms