RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
SRSF4-208ENST00000634348 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
SRSF4-208ENST00000634348 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
SRSF4-208ENST00000634348 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
SRSF4-208ENST00000634348 GOLGA6L6A8MZA4 724 aa14.97□□□□□ -0.01
SRSF4-208ENST00000634348 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
SRSF4-208ENST00000634348 MSNP26038 577 aaKnown RBP14.94□□□□□ -0.02
SRSF4-208ENST00000634348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.029e-8■■□□□ 13.8
SRSF4-208ENST00000634348 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
SRSF4-208ENST00000634348 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
SRSF4-208ENST00000634348 NRDCO43847 1150 aa14.92□□□□□ -0.02
SRSF4-208ENST00000634348 ZBTB7CA1YPR0 619 aa14.91□□□□□ -0.02
SRSF4-208ENST00000634348 TMC1Q8TDI8 760 aa14.91□□□□□ -0.02
SRSF4-208ENST00000634348 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
SRSF4-208ENST00000634348 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
SRSF4-208ENST00000634348 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
SRSF4-208ENST00000634348 SETQ01105 290 aaPredicted RBP14.87□□□□□ -0.03
SRSF4-208ENST00000634348 APPP05067 770 aa14.87□□□□□ -0.03
SRSF4-208ENST00000634348 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
SRSF4-208ENST00000634348 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
SRSF4-208ENST00000634348 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
SRSF4-208ENST00000634348 DEKP35659 375 aaKnown RBP14.84□□□□□ -0.03
SRSF4-208ENST00000634348 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
SRSF4-208ENST00000634348 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.044e-6■□□□□ 11
SRSF4-208ENST00000634348 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
SRSF4-208ENST00000634348 ARID3AQ99856 593 aa14.8□□□□□ -0.04
SRSF4-208ENST00000634348 VSIG10Q8N0Z9 540 aa14.79□□□□□ -0.04
SRSF4-208ENST00000634348 C14orf37Q86TY3 774 aa14.78□□□□□ -0.04
SRSF4-208ENST00000634348 HSP90AA2PQ14568 343 aaPredicted RBP14.78□□□□□ -0.04
SRSF4-208ENST00000634348 NOP58Q9Y2X3 529 aaKnown RBP14.78□□□□□ -0.04
SRSF4-208ENST00000634348 GOLGA6L1Q8N7Z2 621 aa14.77□□□□□ -0.04
SRSF4-208ENST00000634348 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.05
SRSF4-208ENST00000634348 ABCC9O60706 1549 aa14.76□□□□□ -0.05
SRSF4-208ENST00000634348 MIER1Q8N108 512 aa14.74□□□□□ -0.05
SRSF4-208ENST00000634348 PNNQ9H307 717 aaKnown RBP14.74□□□□□ -0.05
SRSF4-208ENST00000634348 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
SRSF4-208ENST00000634348 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
SRSF4-208ENST00000634348 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
SRSF4-208ENST00000634348 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
SRSF4-208ENST00000634348 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
SRSF4-208ENST00000634348 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
SRSF4-208ENST00000634348 DRC7Q8IY82 874 aa14.68□□□□□ -0.06
SRSF4-208ENST00000634348 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
SRSF4-208ENST00000634348 RSPH6AQ9H0K4 717 aa14.66□□□□□ -0.06
SRSF4-208ENST00000634348 CASC1Q6TDU7 716 aa14.66□□□□□ -0.06
SRSF4-208ENST00000634348 KIAA2012Q0VF49 1180 aa14.65□□□□□ -0.06
SRSF4-208ENST00000634348 NEUROD2Q15784 382 aa14.63□□□□□ -0.07
SRSF4-208ENST00000634348 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
SRSF4-208ENST00000634348 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
SRSF4-208ENST00000634348 HSP90AB1P08238 724 aaKnown RBP14.58□□□□□ -0.08
SRSF4-208ENST00000634348 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
SRSF4-208ENST00000634348 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
SRSF4-208ENST00000634348 RRP7BPQ9NSQ0 103 aa14.57□□□□□ -0.08
SRSF4-208ENST00000634348 RGS3P49796 1198 aa14.56□□□□□ -0.08
SRSF4-208ENST00000634348 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
SRSF4-208ENST00000634348 ZNF771Q7L3S4 317 aaPredicted RBP14.56□□□□□ -0.08
SRSF4-208ENST00000634348 GOLGA6L4A6NEF3 574 aa14.56□□□□□ -0.08
SRSF4-208ENST00000634348 GOLGA6L3A6NEY3 463 aa14.54□□□□□ -0.08
SRSF4-208ENST00000634348 HAP1P54257 671 aaPredicted RBP14.53□□□□□ -0.08
SRSF4-208ENST00000634348 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
SRSF4-208ENST00000634348 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
SRSF4-208ENST00000634348 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
SRSF4-208ENST00000634348 TSPY4P0CV99 314 aa14.51□□□□□ -0.09
SRSF4-208ENST00000634348 TSPY10P0CW01 314 aa14.51□□□□□ -0.09
SRSF4-208ENST00000634348 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
SRSF4-208ENST00000634348 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
SRSF4-208ENST00000634348 FTSJ3Q8IY81 847 aaKnown RBP14.5□□□□□ -0.09
SRSF4-208ENST00000634348 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
SRSF4-208ENST00000634348 RRP12Q5JTH9 1297 aaKnown RBP14.49□□□□□ -0.09
SRSF4-208ENST00000634348 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
SRSF4-208ENST00000634348 PATL2C9JE40 543 aaKnown RBP14.47□□□□□ -0.09
SRSF4-208ENST00000634348 NOM1Q5C9Z4 860 aaKnown RBP14.47□□□□□ -0.09
SRSF4-208ENST00000634348 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
SRSF4-208ENST00000634348 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
SRSF4-208ENST00000634348 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
SRSF4-208ENST00000634348 NPHP1O15259 732 aa14.45□□□□□ -0.1
SRSF4-208ENST00000634348 FGD1P98174 961 aa14.43□□□□□ -0.1
SRSF4-208ENST00000634348 PRM3Q9NNZ6 103 aa14.43□□□□□ -0.1
SRSF4-208ENST00000634348 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
SRSF4-208ENST00000634348 SOX12O15370 315 aa14.42□□□□□ -0.1
SRSF4-208ENST00000634348 GPS2Q13227 327 aa14.42□□□□□ -0.1
SRSF4-208ENST00000634348 TEX35Q5T0J7 233 aa14.41□□□□□ -0.1
SRSF4-208ENST00000634348 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
SRSF4-208ENST00000634348 CLSTN1O94985 981 aa14.4□□□□□ -0.1
SRSF4-208ENST00000634348 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
SRSF4-208ENST00000634348 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
SRSF4-208ENST00000634348 KCNJ4P48050 445 aa14.39□□□□□ -0.11
SRSF4-208ENST00000634348 CC2D1BQ5T0F9 858 aaKnown RBP14.39□□□□□ -0.11
SRSF4-208ENST00000634348 GBP4Q96PP9 640 aa14.38□□□□□ -0.11
SRSF4-208ENST00000634348 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
SRSF4-208ENST00000634348 NEFHP12036 1026 aa14.37□□□□□ -0.11
SRSF4-208ENST00000634348 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SRSF4-208ENST00000634348 PPP4R2Q9NY27 417 aa14.36□□□□□ -0.11
SRSF4-208ENST00000634348 TPM4P67936 248 aa14.36□□□□□ -0.11
SRSF4-208ENST00000634348 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
SRSF4-208ENST00000634348 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
SRSF4-208ENST00000634348 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
SRSF4-208ENST00000634348 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
SRSF4-208ENST00000634348 APBB1O00213 710 aa14.34□□□□□ -0.11
SRSF4-208ENST00000634348 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms