RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 HMGXB3Q12766 1538 aa6.54□□□□□ -1.36
PTP4A1-205ENST00000626021 CCDC88BA6NC98 1476 aa6.52□□□□□ -1.37
PTP4A1-205ENST00000626021 ATAD2BQ9ULI0 1458 aa6.52□□□□□ -1.37
PTP4A1-205ENST00000626021 FOXD4L1Q9NU39 408 aa6.5□□□□□ -1.37
PTP4A1-205ENST00000626021 SPDYE1Q8NFV5 336 aaPredicted RBP6.49□□□□□ -1.37
PTP4A1-205ENST00000626021 BAZ1BQ9UIG0 1483 aaKnown RBP6.48□□□□□ -1.37
PTP4A1-205ENST00000626021 POTEB2H3BUK9 544 aa6.46□□□□□ -1.37
PTP4A1-205ENST00000626021 MYCNP04198 464 aaPredicted RBP6.46□□□□□ -1.37
PTP4A1-205ENST00000626021 ACIN1Q9UKV3 1341 aaKnown RBP6.46□□□□□ -1.38
PTP4A1-205ENST00000626021 PABPN1Q86U42 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
PTP4A1-205ENST00000626021 BIVM-ERCC5R4GMW8 1640 aa6.45□□□□□ -1.38
PTP4A1-205ENST00000626021 NCAPD3P42695 1498 aa6.45□□□□□ -1.38
PTP4A1-205ENST00000626021 ABCC8Q09428 1581 aa6.44□□□□□ -1.38
PTP4A1-205ENST00000626021 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
PTP4A1-205ENST00000626021 MAMSTRQ6ZN01 415 aa6.43□□□□□ -1.38
PTP4A1-205ENST00000626021 ZBTB22O15209 634 aa6.42□□□□□ -1.38
PTP4A1-205ENST00000626021 SYNJ1O43426 1573 aa6.42□□□□□ -1.38
PTP4A1-205ENST00000626021 CSRNP3Q8WYN3 585 aa6.41□□□□□ -1.38
PTP4A1-205ENST00000626021 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
PTP4A1-205ENST00000626021 TRIM41Q8WV44 630 aa6.41□□□□□ -1.38
PTP4A1-205ENST00000626021 TOP2BQ02880 1626 aa6.4□□□□□ -1.38
PTP4A1-205ENST00000626021 CC2D2AQ9P2K1 1620 aa6.4□□□□□ -1.39
PTP4A1-205ENST00000626021 CENPBP07199 599 aaPredicted RBP6.4□□□□□ -1.39
PTP4A1-205ENST00000626021 SPDYE2BA6NHP3 402 aa6.39□□□□□ -1.39
PTP4A1-205ENST00000626021 SPDYE6P0CI01 402 aa6.39□□□□□ -1.39
PTP4A1-205ENST00000626021 SPDYE2Q495Y8 402 aa6.39□□□□□ -1.39
PTP4A1-205ENST00000626021 CLEC11AQ9Y240 323 aa6.38□□□□□ -1.39
PTP4A1-205ENST00000626021 NEUROD1Q13562 356 aa6.38□□□□□ -1.39
PTP4A1-205ENST00000626021 EEA1Q15075 1411 aa6.37□□□□□ -1.39
PTP4A1-205ENST00000626021 CDAN1Q8IWY9 1227 aa6.37□□□□□ -1.39
PTP4A1-205ENST00000626021 KIF21BO75037 1637 aa6.37□□□□□ -1.39
PTP4A1-205ENST00000626021 FAM163AQ96GL9 167 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1-205ENST00000626021 ATXN8OSP0DMR3 200 aa6.36□□□□□ -1.39
PTP4A1-205ENST00000626021 WRNQ14191 1432 aaPredicted RBP eCLIP6.35□□□□□ -1.39
PTP4A1-205ENST00000626021 CFTRP13569 1480 aa6.34□□□□□ -1.39
PTP4A1-205ENST00000626021 ZNF579Q8NAF0 562 aaKnown RBP6.34□□□□□ -1.39
PTP4A1-205ENST00000626021 GTF3C3Q9Y5Q9 886 aa6.34□□□□□ -1.39
PTP4A1-205ENST00000626021 MMRN1Q13201 1228 aa6.33□□□□□ -1.4
PTP4A1-205ENST00000626021 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
PTP4A1-205ENST00000626021 CHADLQ6NUI6 762 aa6.33□□□□□ -1.4
PTP4A1-205ENST00000626021 CUX1P39880 1505 aa6.31□□□□□ -1.4
PTP4A1-205ENST00000626021 CCER1Q8TC90 406 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1-205ENST00000626021 WDR97A6NE52 1622 aa6.29□□□□□ -1.4
PTP4A1-205ENST00000626021 LAMC3Q9Y6N6 1575 aa6.29□□□□□ -1.4
PTP4A1-205ENST00000626021 ERICH3Q5RHP9 1530 aa6.28□□□□□ -1.4
PTP4A1-205ENST00000626021 GOLGA3Q08378 1498 aa6.28□□□□□ -1.4
PTP4A1-205ENST00000626021 SOGA1O94964 1423 aa6.28□□□□□ -1.4
PTP4A1-205ENST00000626021 FAM9AQ8IZU1 332 aaPredicted RBP6.27□□□□□ -1.4
PTP4A1-205ENST00000626021 ZNF316A6NFI3 1004 aaPredicted RBP6.26□□□□□ -1.41
PTP4A1-205ENST00000626021 RUSC2Q8N2Y8 1516 aa6.26□□□□□ -1.41
PTP4A1-205ENST00000626021 CEP164Q9UPV0 1460 aa6.26□□□□□ -1.41
PTP4A1-205ENST00000626021 DNMBPQ6XZF7 1577 aa6.26□□□□□ -1.41
PTP4A1-205ENST00000626021 SCUBE2Q9NQ36 999 aa6.26□□□□□ -1.41
PTP4A1-205ENST00000626021 SPNS2Q8IVW8 549 aa6.25□□□□□ -1.41
PTP4A1-205ENST00000626021 KIF21AQ7Z4S6 1674 aa6.25□□□□□ -1.41
PTP4A1-205ENST00000626021 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
PTP4A1-205ENST00000626021 TNIKQ9UKE5 1360 aa6.24□□□□□ -1.41
PTP4A1-205ENST00000626021 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
PTP4A1-205ENST00000626021 CADPSQ9ULU8 1353 aa6.23□□□□□ -1.41
PTP4A1-205ENST00000626021 PRR29P0C7W0 189 aa6.23□□□□□ -1.41
PTP4A1-205ENST00000626021 POTEJP0CG39 1038 aa6.23□□□□□ -1.41
PTP4A1-205ENST00000626021 CEP162Q5TB80 1403 aa6.22□□□□□ -1.41
PTP4A1-205ENST00000626021 GALR2O43603 387 aaPredicted RBP6.22□□□□□ -1.41
PTP4A1-205ENST00000626021 C7P10643 843 aa6.21□□□□□ -1.42
PTP4A1-205ENST00000626021 SLC39A7Q92504 469 aa6.21□□□□□ -1.42
PTP4A1-205ENST00000626021 CUL7Q14999 1698 aa6.21□□□□□ -1.42
PTP4A1-205ENST00000626021 CTTNBP2Q8WZ74 1663 aa6.21□□□□□ -1.42
PTP4A1-205ENST00000626021 PRXQ9BXM0 1461 aa6.21□□□□□ -1.42
PTP4A1-205ENST00000626021 TTBK1Q5TCY1 1321 aaPredicted RBP6.2□□□□□ -1.42
PTP4A1-205ENST00000626021 FANCD2Q9BXW9 1451 aa6.2□□□□□ -1.42
PTP4A1-205ENST00000626021 FGD5Q6ZNL6 1462 aa6.19□□□□□ -1.42
PTP4A1-205ENST00000626021 ABCA5Q8WWZ7 1642 aa6.19□□□□□ -1.42
PTP4A1-205ENST00000626021 TOPBP1Q92547 1522 aa6.18□□□□□ -1.42
PTP4A1-205ENST00000626021 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
PTP4A1-205ENST00000626021 METRNQ9UJH8 293 aa6.18□□□□□ -1.42
PTP4A1-205ENST00000626021 RAPGEF2Q9Y4G8 1499 aa6.18□□□□□ -1.42
PTP4A1-205ENST00000626021 KIF27Q86VH2 1401 aa6.17□□□□□ -1.42
PTP4A1-205ENST00000626021 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
PTP4A1-205ENST00000626021 SSUH2Q9Y2M2 353 aa6.17□□□□□ -1.42
PTP4A1-205ENST00000626021 ABCA10Q8WWZ4 1543 aa6.17□□□□□ -1.42
PTP4A1-205ENST00000626021 NESP48681 1621 aa6.16□□□□□ -1.42
PTP4A1-205ENST00000626021 TARBP1Q13395 1621 aaKnown RBP6.16□□□□□ -1.42
PTP4A1-205ENST00000626021 URB2Q14146 1524 aaKnown RBP6.15□□□□□ -1.42
PTP4A1-205ENST00000626021 MIER1Q8N108 512 aa6.15□□□□□ -1.43
PTP4A1-205ENST00000626021 POLA1P09884 1462 aaPredicted RBP6.15□□□□□ -1.43
PTP4A1-205ENST00000626021 FBLN2P98095 1184 aa6.14□□□□□ -1.43
PTP4A1-205ENST00000626021 ATF5Q9Y2D1 282 aaPredicted RBP6.14□□□□□ -1.43
PTP4A1-205ENST00000626021 CFAP43Q8NDM7 1665 aa6.14□□□□□ -1.43
PTP4A1-205ENST00000626021 CUX2O14529 1486 aa6.13□□□□□ -1.43
PTP4A1-205ENST00000626021 CLIP1P30622 1438 aa6.13□□□□□ -1.43
PTP4A1-205ENST00000626021 VPS8Q8N3P4 1428 aa6.13□□□□□ -1.43
PTP4A1-205ENST00000626021 ARAP1Q96P48 1450 aa6.12□□□□□ -1.43
PTP4A1-205ENST00000626021 PDS5BQ9NTI5 1447 aa6.11□□□□□ -1.43
PTP4A1-205ENST00000626021 ASTLQ6HA08 431 aaPredicted RBP6.11□□□□□ -1.43
PTP4A1-205ENST00000626021 WDR62O43379 1518 aa6.11□□□□□ -1.43
PTP4A1-205ENST00000626021 THOC2Q8NI27 1593 aaKnown RBP6.1□□□□□ -1.43
PTP4A1-205ENST00000626021 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
PTP4A1-205ENST00000626021 YTHDC1Q96MU7 727 aaKnown RBP6.09□□□□□ -1.43
PTP4A1-205ENST00000626021 ZNF692Q9BU19 519 aaPredicted RBP6.09□□□□□ -1.43
PTP4A1-205ENST00000626021 MRC2Q9UBG0 1479 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms