RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
CHD2-205ENST00000625662 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
CHD2-205ENST00000625662 ANP32CO43423 234 aa16.17■□□□□ 0.18
CHD2-205ENST00000625662 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CHD2-205ENST00000625662 KANK1Q14678 1352 aa16.17■□□□□ 0.18
CHD2-205ENST00000625662 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
CHD2-205ENST00000625662 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
CHD2-205ENST00000625662 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
CHD2-205ENST00000625662 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
CHD2-205ENST00000625662 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
CHD2-205ENST00000625662 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
CHD2-205ENST00000625662 HRCP23327 699 aa16.1■□□□□ 0.17
CHD2-205ENST00000625662 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.16
CHD2-205ENST00000625662 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
CHD2-205ENST00000625662 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
CHD2-205ENST00000625662 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
CHD2-205ENST00000625662 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
CHD2-205ENST00000625662 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
CHD2-205ENST00000625662 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
CHD2-205ENST00000625662 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
CHD2-205ENST00000625662 FMN1Q68DA7 1419 aa16■□□□□ 0.15
CHD2-205ENST00000625662 CDCA8Q53HL2 280 aa16■□□□□ 0.15
CHD2-205ENST00000625662 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
CHD2-205ENST00000625662 MLECQ14165 292 aa15.98■□□□□ 0.15
CHD2-205ENST00000625662 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
CHD2-205ENST00000625662 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.14
CHD2-205ENST00000625662 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
CHD2-205ENST00000625662 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
CHD2-205ENST00000625662 A0A0G2JS52 829 aa15.92■□□□□ 0.14
CHD2-205ENST00000625662 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
CHD2-205ENST00000625662 WIZO95785 1651 aa15.92■□□□□ 0.14
CHD2-205ENST00000625662 POGKQ9P215 609 aa15.91■□□□□ 0.14
CHD2-205ENST00000625662 PTPRGP23470 1445 aa15.9■□□□□ 0.14
CHD2-205ENST00000625662 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
CHD2-205ENST00000625662 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
CHD2-205ENST00000625662 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
CHD2-205ENST00000625662 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
CHD2-205ENST00000625662 GGT6Q6P531 493 aa15.85■□□□□ 0.13
CHD2-205ENST00000625662 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
CHD2-205ENST00000625662 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
CHD2-205ENST00000625662 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
CHD2-205ENST00000625662 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHD2-205ENST00000625662 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
CHD2-205ENST00000625662 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
CHD2-205ENST00000625662 CCDC18Q5T9S5 1454 aa15.81■□□□□ 0.12
CHD2-205ENST00000625662 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
CHD2-205ENST00000625662 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
CHD2-205ENST00000625662 LMOD2Q6P5Q4 547 aa15.8■□□□□ 0.12
CHD2-205ENST00000625662 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
CHD2-205ENST00000625662 ARHGAP35Q9NRY4 1499 aa15.79■□□□□ 0.12
CHD2-205ENST00000625662 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
CHD2-205ENST00000625662 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
CHD2-205ENST00000625662 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHD2-205ENST00000625662 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
CHD2-205ENST00000625662 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
CHD2-205ENST00000625662 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
CHD2-205ENST00000625662 FAM69CQ0P6D2 419 aa15.74■□□□□ 0.11
CHD2-205ENST00000625662 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
CHD2-205ENST00000625662 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
CHD2-205ENST00000625662 WASHC2CQ9Y4E1 1318 aa15.69■□□□□ 0.1
CHD2-205ENST00000625662 KIF3BO15066 747 aa15.69■□□□□ 0.1
CHD2-205ENST00000625662 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
CHD2-205ENST00000625662 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
CHD2-205ENST00000625662 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
CHD2-205ENST00000625662 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
CHD2-205ENST00000625662 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
CHD2-205ENST00000625662 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
CHD2-205ENST00000625662 CFTRP13569 1480 aa15.65■□□□□ 0.1
CHD2-205ENST00000625662 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
CHD2-205ENST00000625662 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
CHD2-205ENST00000625662 LAMC3Q9Y6N6 1575 aa15.6■□□□□ 0.09
CHD2-205ENST00000625662 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.098e-10■■■■□ 26.3
CHD2-205ENST00000625662 NPHP1O15259 732 aa15.59■□□□□ 0.09
CHD2-205ENST00000625662 RAD54L2Q9Y4B4 1467 aa15.58■□□□□ 0.09
CHD2-205ENST00000625662 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.09
CHD2-205ENST00000625662 TMF1P82094 1093 aa15.58■□□□□ 0.09
CHD2-205ENST00000625662 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.09
CHD2-205ENST00000625662 BCL11AQ9H165 835 aa15.58■□□□□ 0.08
CHD2-205ENST00000625662 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
CHD2-205ENST00000625662 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
CHD2-205ENST00000625662 NUP155O75694 1391 aa15.56■□□□□ 0.08
CHD2-205ENST00000625662 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
CHD2-205ENST00000625662 EIF3AQ14152 1382 aaKnown RBP15.55■□□□□ 0.08
CHD2-205ENST00000625662 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
CHD2-205ENST00000625662 TIMELESSQ9UNS1 1208 aa15.54■□□□□ 0.08
CHD2-205ENST00000625662 UACAQ9BZF9 1416 aa15.54■□□□□ 0.08
CHD2-205ENST00000625662 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
CHD2-205ENST00000625662 PKD2Q13563 968 aa15.53■□□□□ 0.08
CHD2-205ENST00000625662 ARXQ96QS3 562 aa15.53■□□□□ 0.08
CHD2-205ENST00000625662 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
CHD2-205ENST00000625662 PRG4Q92954 1404 aaPredicted RBP15.52■□□□□ 0.07
CHD2-205ENST00000625662 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHD2-205ENST00000625662 NESP48681 1621 aa15.51■□□□□ 0.07
CHD2-205ENST00000625662 SYNJ2O15056 1496 aa15.51■□□□□ 0.07
CHD2-205ENST00000625662 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
CHD2-205ENST00000625662 IGF1RP08069 1367 aa15.51■□□□□ 0.07
CHD2-205ENST00000625662 POGZQ7Z3K3 1410 aa15.49■□□□□ 0.07
CHD2-205ENST00000625662 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
CHD2-205ENST00000625662 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
CHD2-205ENST00000625662 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms