RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 CHGAP10645 457 aaKnown RBP6.82□□□□□ -1.32
SCARNA4-202ENST00000625402 HS6ST3Q8IZP7 471 aa6.8□□□□□ -1.32
SCARNA4-202ENST00000625402 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
SCARNA4-202ENST00000625402 RIOK3O14730 519 aaKnown RBP6.78□□□□□ -1.32
SCARNA4-202ENST00000625402 PYGBP11216 843 aa6.78□□□□□ -1.32
SCARNA4-202ENST00000625402 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
SCARNA4-202ENST00000625402 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.78□□□□□ -1.32
SCARNA4-202ENST00000625402 FARP1Q9Y4F1 1045 aaPredicted RBP6.78□□□□□ -1.32
SCARNA4-202ENST00000625402 PRKAR2AP13861 404 aaKnown RBP6.77□□□□□ -1.33
SCARNA4-202ENST00000625402 FXR2P51116 673 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCARNA4-202ENST00000625402 CFAP44Q96MT7 982 aa6.77□□□□□ -1.33
SCARNA4-202ENST00000625402 NKX1-1Q15270 411 aaPredicted RBP6.76□□□□□ -1.33
SCARNA4-202ENST00000625402 CHRM1P11229 460 aaPredicted RBP6.75□□□□□ -1.33
SCARNA4-202ENST00000625402 PIP4P2Q8N4L2 257 aa6.74□□□□□ -1.33
SCARNA4-202ENST00000625402 TSPYL2Q9H2G4 693 aaPredicted RBP6.74□□□□□ -1.33
SCARNA4-202ENST00000625402 DNAJC5Q9H3Z4 198 aa6.74□□□□□ -1.33
SCARNA4-202ENST00000625402 KDM2AQ9Y2K7 1162 aa6.74□□□□□ -1.33
SCARNA4-202ENST00000625402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.72□□□□□ -1.33
SCARNA4-202ENST00000625402 VGFO15240 615 aaPredicted RBP6.72□□□□□ -1.33
SCARNA4-202ENST00000625402 SPRYD3Q8NCJ5 442 aa6.72□□□□□ -1.33
SCARNA4-202ENST00000625402 ZFP91Q96JP5 570 aaPredicted RBP6.72□□□□□ -1.33
SCARNA4-202ENST00000625402 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
SCARNA4-202ENST00000625402 STK25O00506 426 aa6.71□□□□□ -1.34
SCARNA4-202ENST00000625402 CCDC61Q9Y6R9 512 aa6.71□□□□□ -1.34
SCARNA4-202ENST00000625402 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
SCARNA4-202ENST00000625402 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
SCARNA4-202ENST00000625402 BCL11BQ9C0K0 894 aaPredicted RBP6.69□□□□□ -1.34
SCARNA4-202ENST00000625402 GTPBP6O43824 516 aaPredicted RBP6.68□□□□□ -1.34
SCARNA4-202ENST00000625402 PCDHB8Q9UN66 801 aa6.67□□□□□ -1.34
SCARNA4-202ENST00000625402 PCDHB13Q9Y5F0 798 aa6.67□□□□□ -1.34
SCARNA4-202ENST00000625402 TAOK2Q9UL54 1235 aa6.66□□□□□ -1.34
SCARNA4-202ENST00000625402 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
SCARNA4-202ENST00000625402 ZNF467Q7Z7K2 595 aaPredicted RBP6.63□□□□□ -1.35
SCARNA4-202ENST00000625402 IFNL1Q8IU54 200 aa6.62□□□□□ -1.35
SCARNA4-202ENST00000625402 MAP3K13O43283 966 aa6.61□□□□□ -1.35
SCARNA4-202ENST00000625402 PDAP1Q13442 181 aaKnown RBP6.61□□□□□ -1.35
SCARNA4-202ENST00000625402 ZNF579Q8NAF0 562 aaKnown RBP6.61□□□□□ -1.35
SCARNA4-202ENST00000625402 KIF12Q96FN5 646 aa6.61□□□□□ -1.35
SCARNA4-202ENST00000625402 CD44P16070 742 aaKnown RBP6.6□□□□□ -1.35
SCARNA4-202ENST00000625402 PHF12Q96QT6 1004 aa6.6□□□□□ -1.35
SCARNA4-202ENST00000625402 PAK3O75914 559 aaPredicted RBP6.58□□□□□ -1.36
SCARNA4-202ENST00000625402 PSEN1P49768 467 aa6.58□□□□□ -1.36
SCARNA4-202ENST00000625402 ZRANB1Q9UGI0 708 aa6.58□□□□□ -1.36
SCARNA4-202ENST00000625402 BCANQ96GW7 911 aa6.57□□□□□ -1.36
SCARNA4-202ENST00000625402 POTEHQ6S545 545 aa6.56□□□□□ -1.36
SCARNA4-202ENST00000625402 MFRPQ9BY79 579 aa6.56□□□□□ -1.36
SCARNA4-202ENST00000625402 TRPC6Q9Y210 931 aa6.55□□□□□ -1.36
SCARNA4-202ENST00000625402 C19orf67A6NJJ6 358 aa6.54□□□□□ -1.36
SCARNA4-202ENST00000625402 CADPS2Q86UW7 1296 aa6.54□□□□□ -1.36
SCARNA4-202ENST00000625402 EFCAB3Q8N7B9 438 aa6.52□□□□□ -1.37
SCARNA4-202ENST00000625402 MS4A3Q96HJ5 214 aa6.52□□□□□ -1.37
SCARNA4-202ENST00000625402 CABP2Q9NPB3 220 aa6.52□□□□□ -1.37
SCARNA4-202ENST00000625402 FBXO22Q8NEZ5 403 aa6.51□□□□□ -1.37
SCARNA4-202ENST00000625402 RYDENQ9NUL5 291 aaKnown RBP6.51□□□□□ -1.37
SCARNA4-202ENST00000625402 PPP1R37O75864 691 aa6.5□□□□□ -1.37
SCARNA4-202ENST00000625402 HAX1O00165 279 aa6.49□□□□□ -1.37
SCARNA4-202ENST00000625402 PHF8Q9UPP1 1060 aa6.49□□□□□ -1.37
SCARNA4-202ENST00000625402 PRKCSHP14314 528 aaPredicted RBP6.48□□□□□ -1.37
SCARNA4-202ENST00000625402 EVX2Q03828 476 aa6.47□□□□□ -1.37
SCARNA4-202ENST00000625402 MS4A4AQ96JQ5 239 aa6.47□□□□□ -1.37
SCARNA4-202ENST00000625402 TMEM106CQ9BVX2 250 aa6.46□□□□□ -1.38
SCARNA4-202ENST00000625402 TTLL13PA6NNM8 815 aa6.44□□□□□ -1.38
SCARNA4-202ENST00000625402 SOX12O15370 315 aa6.44□□□□□ -1.38
SCARNA4-202ENST00000625402 GALR2O43603 387 aaPredicted RBP6.44□□□□□ -1.38
SCARNA4-202ENST00000625402 NLRP6P59044 892 aa6.44□□□□□ -1.38
SCARNA4-202ENST00000625402 BMP2KQ9NSY1 1161 aaPredicted RBP6.43□□□□□ -1.38
SCARNA4-202ENST00000625402 KCNV2Q8TDN2 545 aa6.42□□□□□ -1.38
SCARNA4-202ENST00000625402 TIE1P35590 1138 aa6.41□□□□□ -1.38
SCARNA4-202ENST00000625402 NBR1Q14596 966 aa6.41□□□□□ -1.38
SCARNA4-202ENST00000625402 TPRNQ4KMQ1 711 aa6.4□□□□□ -1.38
SCARNA4-202ENST00000625402 NCKAP5LQ9HCH0 1330 aa6.4□□□□□ -1.39
SCARNA4-202ENST00000625402 ILDR1Q86SU0 546 aaPredicted RBP6.38□□□□□ -1.39
SCARNA4-202ENST00000625402 TRIM35Q9UPQ4 493 aa6.37□□□□□ -1.39
SCARNA4-202ENST00000625402 GOLGA2Q08379 1002 aa6.36□□□□□ -1.39
SCARNA4-202ENST00000625402 MKRN3Q13064 507 aaKnown RBP6.35□□□□□ -1.39
SCARNA4-202ENST00000625402 P3H3Q8IVL6 736 aa6.35□□□□□ -1.39
SCARNA4-202ENST00000625402 CRISPLD2Q9H0B8 497 aa6.35□□□□□ -1.39
SCARNA4-202ENST00000625402 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
SCARNA4-202ENST00000625402 PDCD7Q8N8D1 485 aaKnown RBP6.34□□□□□ -1.39
SCARNA4-202ENST00000625402 DPY19L2Q6NUT2 758 aa6.33□□□□□ -1.4
SCARNA4-202ENST00000625402 WDR70Q9NW82 654 aa6.33□□□□□ -1.4
SCARNA4-202ENST00000625402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCARNA4-202ENST00000625402 ATMINO43313 823 aaPredicted RBP6.32□□□□□ -1.4
SCARNA4-202ENST00000625402 CLCN6P51797 869 aa6.32□□□□□ -1.4
SCARNA4-202ENST00000625402 MFSD10Q14728 455 aa6.32□□□□□ -1.4
SCARNA4-202ENST00000625402 SP7Q8TDD2 431 aaPredicted RBP6.32□□□□□ -1.4
SCARNA4-202ENST00000625402 ASTLQ6HA08 431 aaPredicted RBP6.31□□□□□ -1.4
SCARNA4-202ENST00000625402 LARP6Q9BRS8 491 aaKnown RBP6.31□□□□□ -1.4
SCARNA4-202ENST00000625402 IRX5P78411 483 aaPredicted RBP6.3□□□□□ -1.4
SCARNA4-202ENST00000625402 E2F4Q16254 413 aa6.3□□□□□ -1.4
SCARNA4-202ENST00000625402 GABBR2O75899 941 aa6.29□□□□□ -1.4
SCARNA4-202ENST00000625402 MICALL2Q8IY33 904 aa6.29□□□□□ -1.4
SCARNA4-202ENST00000625402 PELP1Q8IZL8 1130 aaKnown RBP6.28□□□□□ -1.4
SCARNA4-202ENST00000625402 DDX27Q96GQ7 796 aaKnown RBP6.28□□□□□ -1.4
SCARNA4-202ENST00000625402 ARHGEF1Q92888 912 aaKnown RBP6.27□□□□□ -1.41
SCARNA4-202ENST00000625402 PDE4AP27815 886 aa6.26□□□□□ -1.41
SCARNA4-202ENST00000625402 CAMK2BQ13554 666 aa6.26□□□□□ -1.41
SCARNA4-202ENST00000625402 SEMA3EO15041 775 aa6.25□□□□□ -1.41
SCARNA4-202ENST00000625402 IER5LQ5T953 404 aa6.25□□□□□ -1.41
SCARNA4-202ENST00000625402 DSG2Q14126 1118 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms