RNA–Protein interactions for RNA: ENST00000624437.1

HACD3-212, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

Gene HACD3, Length 2,746 nt, Biotype TEC, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-212ENST00000624437 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
HACD3-212ENST00000624437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
HACD3-212ENST00000624437 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
HACD3-212ENST00000624437 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
HACD3-212ENST00000624437 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■□□ 15.5
HACD3-212ENST00000624437 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
HACD3-212ENST00000624437 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
HACD3-212ENST00000624437 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
HACD3-212ENST00000624437 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.37
HACD3-212ENST00000624437 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
HACD3-212ENST00000624437 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
HACD3-212ENST00000624437 CUL7Q14999 1698 aa12.74□□□□□ -0.37
HACD3-212ENST00000624437 CASKIN1Q8WXD9 1431 aa12.73□□□□□ -0.37
HACD3-212ENST00000624437 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
HACD3-212ENST00000624437 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
HACD3-212ENST00000624437 ABCA10Q8WWZ4 1543 aa12.71□□□□□ -0.37
HACD3-212ENST00000624437 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.38
HACD3-212ENST00000624437 CCER2I3L3R5 266 aa12.68□□□□□ -0.38
HACD3-212ENST00000624437 ITGAEP38570 1179 aa12.68□□□□□ -0.38
HACD3-212ENST00000624437 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
HACD3-212ENST00000624437 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
HACD3-212ENST00000624437 PPP1R15AO75807 674 aaPredicted RBP12.66□□□□□ -0.38
HACD3-212ENST00000624437 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
HACD3-212ENST00000624437 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
HACD3-212ENST00000624437 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
HACD3-212ENST00000624437 FAM50AQ14320 339 aaKnown RBP12.63□□□□□ -0.39
HACD3-212ENST00000624437 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
HACD3-212ENST00000624437 HFM1A2PYH4 1435 aa12.62□□□□□ -0.39
HACD3-212ENST00000624437 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
HACD3-212ENST00000624437 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
HACD3-212ENST00000624437 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
HACD3-212ENST00000624437 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
HACD3-212ENST00000624437 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
HACD3-212ENST00000624437 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
HACD3-212ENST00000624437 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
HACD3-212ENST00000624437 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
HACD3-212ENST00000624437 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
HACD3-212ENST00000624437 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
HACD3-212ENST00000624437 ANP32CO43423 234 aa12.58□□□□□ -0.4
HACD3-212ENST00000624437 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
HACD3-212ENST00000624437 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
HACD3-212ENST00000624437 NEFLP07196 543 aa12.57□□□□□ -0.4
HACD3-212ENST00000624437 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
HACD3-212ENST00000624437 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
HACD3-212ENST00000624437 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
HACD3-212ENST00000624437 MYOM3Q5VTT5 1437 aa12.55□□□□□ -0.4
HACD3-212ENST00000624437 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
HACD3-212ENST00000624437 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
HACD3-212ENST00000624437 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
HACD3-212ENST00000624437 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
HACD3-212ENST00000624437 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
HACD3-212ENST00000624437 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
HACD3-212ENST00000624437 GCC2Q8IWJ2 1684 aa12.53□□□□□ -0.4
HACD3-212ENST00000624437 NAIPQ13075 1403 aa12.53□□□□□ -0.4
HACD3-212ENST00000624437 FKBP8Q14318 412 aa12.53□□□□□ -0.4
HACD3-212ENST00000624437 HECW1Q76N89 1606 aa12.52□□□□□ -0.4
HACD3-212ENST00000624437 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
HACD3-212ENST00000624437 NCOA2Q15596 1464 aa12.52□□□□□ -0.4
HACD3-212ENST00000624437 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.41
HACD3-212ENST00000624437 UGGT2Q9NYU1 1516 aa12.51□□□□□ -0.41
HACD3-212ENST00000624437 TCOF1Q13428 1488 aaKnown RBP12.51□□□□□ -0.41
HACD3-212ENST00000624437 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
HACD3-212ENST00000624437 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
HACD3-212ENST00000624437 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
HACD3-212ENST00000624437 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
HACD3-212ENST00000624437 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
HACD3-212ENST00000624437 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
HACD3-212ENST00000624437 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
HACD3-212ENST00000624437 MIA2Q96PC5 1412 aa12.44□□□□□ -0.42
HACD3-212ENST00000624437 BCANQ96GW7 911 aa12.42□□□□□ -0.42
HACD3-212ENST00000624437 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
HACD3-212ENST00000624437 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
HACD3-212ENST00000624437 NESP48681 1621 aa12.39□□□□□ -0.43
HACD3-212ENST00000624437 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
HACD3-212ENST00000624437 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
HACD3-212ENST00000624437 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
HACD3-212ENST00000624437 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
HACD3-212ENST00000624437 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
HACD3-212ENST00000624437 DENND4BO75064 1496 aaPredicted RBP12.37□□□□□ -0.43
HACD3-212ENST00000624437 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
HACD3-212ENST00000624437 IQGAP2Q13576 1575 aa12.37□□□□□ -0.43
HACD3-212ENST00000624437 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
HACD3-212ENST00000624437 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
HACD3-212ENST00000624437 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
HACD3-212ENST00000624437 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
HACD3-212ENST00000624437 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
HACD3-212ENST00000624437 WDR62O43379 1518 aa12.35□□□□□ -0.43
HACD3-212ENST00000624437 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
HACD3-212ENST00000624437 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
HACD3-212ENST00000624437 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
HACD3-212ENST00000624437 HSPA5P11021 654 aaKnown RBP12.34□□□□□ -0.43
HACD3-212ENST00000624437 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
HACD3-212ENST00000624437 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.44
HACD3-212ENST00000624437 DNMT1P26358 1616 aaKnown RBP12.32□□□□□ -0.44
HACD3-212ENST00000624437 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
HACD3-212ENST00000624437 KDM6BO15054 1643 aa12.31□□□□□ -0.44
HACD3-212ENST00000624437 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
HACD3-212ENST00000624437 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
HACD3-212ENST00000624437 TEX14Q8IWB6 1497 aa12.3□□□□□ -0.44
HACD3-212ENST00000624437 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms