RNA–Protein interactions for RNA: ENST00000624437.1

HACD3-212, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

Gene HACD3, Length 2,746 nt, Biotype TEC, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-212ENST00000624437 NISCHQ9Y2I1 1504 aa18.1■□□□□ 0.49
HACD3-212ENST00000624437 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
HACD3-212ENST00000624437 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
HACD3-212ENST00000624437 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
HACD3-212ENST00000624437 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
HACD3-212ENST00000624437 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
HACD3-212ENST00000624437 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
HACD3-212ENST00000624437 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.03
HACD3-212ENST00000624437 HRCP23327 699 aa14.78□□□□□ -0.04
HACD3-212ENST00000624437 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
HACD3-212ENST00000624437 ABCC9O60706 1549 aa14.58□□□□□ -0.08
HACD3-212ENST00000624437 PCGF6Q9BYE7 350 aa14.5□□□□□ -0.09
HACD3-212ENST00000624437 TRIM26Q12899 539 aaPredicted RBP14.35□□□□□ -0.11
HACD3-212ENST00000624437 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
HACD3-212ENST00000624437 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
HACD3-212ENST00000624437 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
HACD3-212ENST00000624437 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
HACD3-212ENST00000624437 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
HACD3-212ENST00000624437 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
HACD3-212ENST00000624437 NACADO15069 1562 aa14.19□□□□□ -0.14
HACD3-212ENST00000624437 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
HACD3-212ENST00000624437 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
HACD3-212ENST00000624437 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
HACD3-212ENST00000624437 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
HACD3-212ENST00000624437 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
HACD3-212ENST00000624437 WIZO95785 1651 aa13.94□□□□□ -0.18
HACD3-212ENST00000624437 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
HACD3-212ENST00000624437 FAM9AQ8IZU1 332 aaPredicted RBP13.86□□□□□ -0.19
HACD3-212ENST00000624437 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
HACD3-212ENST00000624437 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
HACD3-212ENST00000624437 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
HACD3-212ENST00000624437 EEA1Q15075 1411 aa13.75□□□□□ -0.21
HACD3-212ENST00000624437 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
HACD3-212ENST00000624437 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
HACD3-212ENST00000624437 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
HACD3-212ENST00000624437 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
HACD3-212ENST00000624437 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
HACD3-212ENST00000624437 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
HACD3-212ENST00000624437 UNC13AQ9UPW8 1703 aa13.63□□□□□ -0.23
HACD3-212ENST00000624437 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
HACD3-212ENST00000624437 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
HACD3-212ENST00000624437 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
HACD3-212ENST00000624437 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
HACD3-212ENST00000624437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
HACD3-212ENST00000624437 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
HACD3-212ENST00000624437 SOGA1O94964 1423 aa13.53□□□□□ -0.24
HACD3-212ENST00000624437 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
HACD3-212ENST00000624437 KIF21BO75037 1637 aa13.52□□□□□ -0.24
HACD3-212ENST00000624437 CENPBP07199 599 aaPredicted RBP13.5□□□□□ -0.25
HACD3-212ENST00000624437 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
HACD3-212ENST00000624437 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
HACD3-212ENST00000624437 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
HACD3-212ENST00000624437 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
HACD3-212ENST00000624437 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
HACD3-212ENST00000624437 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
HACD3-212ENST00000624437 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
HACD3-212ENST00000624437 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
HACD3-212ENST00000624437 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
HACD3-212ENST00000624437 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
HACD3-212ENST00000624437 CLIP1P30622 1438 aa13.36□□□□□ -0.27
HACD3-212ENST00000624437 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
HACD3-212ENST00000624437 MYT1Q01538 1121 aa13.3□□□□□ -0.28
HACD3-212ENST00000624437 GTF3C3Q9Y5Q9 886 aa13.3□□□□□ -0.28
HACD3-212ENST00000624437 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
HACD3-212ENST00000624437 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
HACD3-212ENST00000624437 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
HACD3-212ENST00000624437 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
HACD3-212ENST00000624437 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
HACD3-212ENST00000624437 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
HACD3-212ENST00000624437 APLP2Q06481 763 aa13.23□□□□□ -0.29
HACD3-212ENST00000624437 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
HACD3-212ENST00000624437 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
HACD3-212ENST00000624437 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
HACD3-212ENST00000624437 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
HACD3-212ENST00000624437 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
HACD3-212ENST00000624437 CUX2O14529 1486 aa13.13□□□□□ -0.31
HACD3-212ENST00000624437 MIER1Q8N108 512 aa13.12□□□□□ -0.31
HACD3-212ENST00000624437 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
HACD3-212ENST00000624437 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
HACD3-212ENST00000624437 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
HACD3-212ENST00000624437 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
HACD3-212ENST00000624437 CUX1P39880 1505 aa13.05□□□□□ -0.32
HACD3-212ENST00000624437 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
HACD3-212ENST00000624437 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
HACD3-212ENST00000624437 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
HACD3-212ENST00000624437 CFTRP13569 1480 aa13.01□□□□□ -0.33
HACD3-212ENST00000624437 CCNB3Q8WWL7 1395 aa12.99□□□□□ -0.33
HACD3-212ENST00000624437 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
HACD3-212ENST00000624437 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
HACD3-212ENST00000624437 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
HACD3-212ENST00000624437 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
HACD3-212ENST00000624437 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.35
HACD3-212ENST00000624437 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
HACD3-212ENST00000624437 MAPKBP1O60336 1514 aa12.87□□□□□ -0.35
HACD3-212ENST00000624437 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
HACD3-212ENST00000624437 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
HACD3-212ENST00000624437 IGF1RP08069 1367 aa12.85□□□□□ -0.35
HACD3-212ENST00000624437 RAB3GAP2Q9H2M9 1393 aa12.85□□□□□ -0.35
HACD3-212ENST00000624437 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
HACD3-212ENST00000624437 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms