RNA–Protein interactions for RNA: ENST00000623548.1

LINC00216-201, long intergenic non-protein coding RNA 216, humanhuman

BASIC

Gene LINC00216, Length 1,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-201ENST00000623548 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
LINC00216-201ENST00000623548 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00216-201ENST00000623548 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
LINC00216-201ENST00000623548 CLCN6P51797 869 aa13.03□□□□□ -0.32
LINC00216-201ENST00000623548 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
LINC00216-201ENST00000623548 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
LINC00216-201ENST00000623548 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
LINC00216-201ENST00000623548 RGL2O15211 777 aa12.99□□□□□ -0.33
LINC00216-201ENST00000623548 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
LINC00216-201ENST00000623548 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
LINC00216-201ENST00000623548 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
LINC00216-201ENST00000623548 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
LINC00216-201ENST00000623548 GSE1Q14687 1217 aa12.92□□□□□ -0.34
LINC00216-201ENST00000623548 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
LINC00216-201ENST00000623548 NUBP1P53384 320 aa12.84□□□□□ -0.35
LINC00216-201ENST00000623548 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
LINC00216-201ENST00000623548 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
LINC00216-201ENST00000623548 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
LINC00216-201ENST00000623548 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
LINC00216-201ENST00000623548 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
LINC00216-201ENST00000623548 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 BCANQ96GW7 911 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
LINC00216-201ENST00000623548 GALR2O43603 387 aaPredicted RBP12.76□□□□□ -0.37
LINC00216-201ENST00000623548 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
LINC00216-201ENST00000623548 LHX8Q68G74 356 aa12.72□□□□□ -0.37
LINC00216-201ENST00000623548 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
LINC00216-201ENST00000623548 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
LINC00216-201ENST00000623548 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
LINC00216-201ENST00000623548 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
LINC00216-201ENST00000623548 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
LINC00216-201ENST00000623548 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
LINC00216-201ENST00000623548 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
LINC00216-201ENST00000623548 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
LINC00216-201ENST00000623548 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
LINC00216-201ENST00000623548 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
LINC00216-201ENST00000623548 SGIP1Q9BQI5 828 aa12.59□□□□□ -0.39
LINC00216-201ENST00000623548 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
LINC00216-201ENST00000623548 STK25O00506 426 aa12.57□□□□□ -0.4
LINC00216-201ENST00000623548 MAP3K13O43283 966 aa12.52□□□□□ -0.41
LINC00216-201ENST00000623548 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
LINC00216-201ENST00000623548 ASTLQ6HA08 431 aaPredicted RBP12.52□□□□□ -0.41
LINC00216-201ENST00000623548 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
LINC00216-201ENST00000623548 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
LINC00216-201ENST00000623548 PYGBP11216 843 aa12.5□□□□□ -0.41
LINC00216-201ENST00000623548 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
LINC00216-201ENST00000623548 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
LINC00216-201ENST00000623548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
LINC00216-201ENST00000623548 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
LINC00216-201ENST00000623548 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
LINC00216-201ENST00000623548 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
LINC00216-201ENST00000623548 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
LINC00216-201ENST00000623548 C7P10643 843 aa12.44□□□□□ -0.42
LINC00216-201ENST00000623548 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
LINC00216-201ENST00000623548 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
LINC00216-201ENST00000623548 TIE1P35590 1138 aa12.42□□□□□ -0.42
LINC00216-201ENST00000623548 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
LINC00216-201ENST00000623548 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
LINC00216-201ENST00000623548 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
LINC00216-201ENST00000623548 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
LINC00216-201ENST00000623548 POTEB2H3BUK9 544 aa12.36□□□□□ -0.43
LINC00216-201ENST00000623548 NBR1Q14596 966 aa12.36□□□□□ -0.43
LINC00216-201ENST00000623548 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
LINC00216-201ENST00000623548 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
LINC00216-201ENST00000623548 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
LINC00216-201ENST00000623548 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
LINC00216-201ENST00000623548 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
LINC00216-201ENST00000623548 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
LINC00216-201ENST00000623548 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
LINC00216-201ENST00000623548 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
LINC00216-201ENST00000623548 SEC24BO95487 1268 aa12.26□□□□□ -0.45
LINC00216-201ENST00000623548 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
LINC00216-201ENST00000623548 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
LINC00216-201ENST00000623548 PSEN1P49768 467 aa12.24□□□□□ -0.45
LINC00216-201ENST00000623548 IER5LQ5T953 404 aa12.23□□□□□ -0.45
LINC00216-201ENST00000623548 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
LINC00216-201ENST00000623548 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
LINC00216-201ENST00000623548 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
LINC00216-201ENST00000623548 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
LINC00216-201ENST00000623548 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
LINC00216-201ENST00000623548 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
LINC00216-201ENST00000623548 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
LINC00216-201ENST00000623548 PLCG2P16885 1265 aa12.11□□□□□ -0.47
LINC00216-201ENST00000623548 SOX12O15370 315 aa12.1□□□□□ -0.47
LINC00216-201ENST00000623548 NLRP6P59044 892 aa12.1□□□□□ -0.47
LINC00216-201ENST00000623548 OCEL1Q9H607 264 aa12.07□□□□□ -0.48
LINC00216-201ENST00000623548 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
LINC00216-201ENST00000623548 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
LINC00216-201ENST00000623548 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
LINC00216-201ENST00000623548 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
LINC00216-201ENST00000623548 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
LINC00216-201ENST00000623548 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
LINC00216-201ENST00000623548 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
LINC00216-201ENST00000623548 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
LINC00216-201ENST00000623548 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
LINC00216-201ENST00000623548 PPP1R37O75864 691 aa11.98□□□□□ -0.49
LINC00216-201ENST00000623548 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms