RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
ZNF48-206ENST00000622647 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
ZNF48-206ENST00000622647 CUL7Q14999 1698 aa26.29■■□□□ 1.8
ZNF48-206ENST00000622647 FAM50AQ14320 339 aaKnown RBP26.27■■□□□ 1.8
ZNF48-206ENST00000622647 PCF11O94913 1555 aaKnown RBP26.27■■□□□ 1.8
ZNF48-206ENST00000622647 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
ZNF48-206ENST00000622647 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
ZNF48-206ENST00000622647 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
ZNF48-206ENST00000622647 LRRC9Q6ZRR7 1453 aa26.24■■□□□ 1.79
ZNF48-206ENST00000622647 ZNF316A6NFI3 1004 aaPredicted RBP26.23■■□□□ 1.79
ZNF48-206ENST00000622647 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
ZNF48-206ENST00000622647 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
ZNF48-206ENST00000622647 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
ZNF48-206ENST00000622647 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
ZNF48-206ENST00000622647 MRC2Q9UBG0 1479 aa26.12■■□□□ 1.77
ZNF48-206ENST00000622647 EFCAB5A4FU69 1503 aa26.12■■□□□ 1.77
ZNF48-206ENST00000622647 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
ZNF48-206ENST00000622647 CASKIN1Q8WXD9 1431 aa26.1■■□□□ 1.77
ZNF48-206ENST00000622647 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
ZNF48-206ENST00000622647 FYCO1Q9BQS8 1478 aa26.07■■□□□ 1.76
ZNF48-206ENST00000622647 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
ZNF48-206ENST00000622647 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
ZNF48-206ENST00000622647 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
ZNF48-206ENST00000622647 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
ZNF48-206ENST00000622647 MTUS2Q5JR59 1369 aa26.01■■□□□ 1.75
ZNF48-206ENST00000622647 PBRM1Q86U86 1689 aa26■■□□□ 1.75
ZNF48-206ENST00000622647 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
ZNF48-206ENST00000622647 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
ZNF48-206ENST00000622647 SAMD9Q5K651 1589 aa25.96■■□□□ 1.75
ZNF48-206ENST00000622647 CLSPNQ9HAW4 1339 aa25.94■■□□□ 1.74
ZNF48-206ENST00000622647 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
ZNF48-206ENST00000622647 GRIN2BQ13224 1484 aa25.93■■□□□ 1.74
ZNF48-206ENST00000622647 FBLN2P98095 1184 aa25.9■■□□□ 1.74
ZNF48-206ENST00000622647 LRRIQ1Q96JM4 1722 aa25.89■■□□□ 1.74
ZNF48-206ENST00000622647 ADAMTS12P58397 1594 aa25.89■■□□□ 1.74
ZNF48-206ENST00000622647 MIER1Q8N108 512 aa25.89■■□□□ 1.73
ZNF48-206ENST00000622647 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
ZNF48-206ENST00000622647 NEUROD1Q13562 356 aa25.88■■□□□ 1.73
ZNF48-206ENST00000622647 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
ZNF48-206ENST00000622647 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
ZNF48-206ENST00000622647 WDR62O43379 1518 aa25.85■■□□□ 1.73
ZNF48-206ENST00000622647 SCAF1Q9H7N4 1312 aaKnown RBP25.85■■□□□ 1.73
ZNF48-206ENST00000622647 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
ZNF48-206ENST00000622647 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
ZNF48-206ENST00000622647 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
ZNF48-206ENST00000622647 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
ZNF48-206ENST00000622647 CHMP7Q8WUX9 453 aaPredicted RBP25.77■■□□□ 1.72
ZNF48-206ENST00000622647 MAGI3Q5TCQ9 1506 aa25.76■■□□□ 1.71
ZNF48-206ENST00000622647 PTPRKQ15262 1439 aa25.75■■□□□ 1.71
ZNF48-206ENST00000622647 CHIC2Q9UKJ5 165 aa25.75■■□□□ 1.71
ZNF48-206ENST00000622647 CDK13Q14004 1512 aaKnown RBP25.74■■□□□ 1.71
ZNF48-206ENST00000622647 EIF4G3O43432 1585 aaKnown RBP25.74■■□□□ 1.71
ZNF48-206ENST00000622647 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
ZNF48-206ENST00000622647 MYOM3Q5VTT5 1437 aa25.71■■□□□ 1.71
ZNF48-206ENST00000622647 RRP7BPQ9NSQ0 103 aa25.69■■□□□ 1.7
ZNF48-206ENST00000622647 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
ZNF48-206ENST00000622647 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
ZNF48-206ENST00000622647 SUPT6HQ7KZ85 1726 aaKnown RBP25.66■■□□□ 1.7
ZNF48-206ENST00000622647 EHBP1L1Q8N3D4 1523 aa25.66■■□□□ 1.7
ZNF48-206ENST00000622647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.7
ZNF48-206ENST00000622647 KIAA0586Q9BVV6 1533 aa25.65■■□□□ 1.7
ZNF48-206ENST00000622647 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.7
ZNF48-206ENST00000622647 CENPBP07199 599 aaPredicted RBP25.64■■□□□ 1.69
ZNF48-206ENST00000622647 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
ZNF48-206ENST00000622647 CCDC18Q5T9S5 1454 aa25.62■■□□□ 1.69
ZNF48-206ENST00000622647 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
ZNF48-206ENST00000622647 UGGT2Q9NYU1 1516 aa25.62■■□□□ 1.69
ZNF48-206ENST00000622647 PTPN23Q9H3S7 1636 aa25.57■■□□□ 1.68
ZNF48-206ENST00000622647 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
ZNF48-206ENST00000622647 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
ZNF48-206ENST00000622647 NAIPQ13075 1403 aa25.53■■□□□ 1.68
ZNF48-206ENST00000622647 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
ZNF48-206ENST00000622647 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
ZNF48-206ENST00000622647 ZNF644Q9H582 1327 aaPredicted RBP25.52■■□□□ 1.68
ZNF48-206ENST00000622647 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
ZNF48-206ENST00000622647 TRIM52Q96A61 297 aa25.51■■□□□ 1.67
ZNF48-206ENST00000622647 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
ZNF48-206ENST00000622647 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
ZNF48-206ENST00000622647 GTF3C3Q9Y5Q9 886 aa25.51■■□□□ 1.67
ZNF48-206ENST00000622647 MAGI1Q96QZ7 1491 aaPredicted RBP25.51■■□□□ 1.67
ZNF48-206ENST00000622647 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
ZNF48-206ENST00000622647 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
ZNF48-206ENST00000622647 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
ZNF48-206ENST00000622647 ZNF777Q9ULD5 760 aaPredicted RBP25.43■■□□□ 1.66
ZNF48-206ENST00000622647 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
ZNF48-206ENST00000622647 PPP1R15AO75807 674 aaPredicted RBP25.42■■□□□ 1.66
ZNF48-206ENST00000622647 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
ZNF48-206ENST00000622647 CDK11AQ9UQ88 783 aaPredicted RBP25.42■■□□□ 1.66
ZNF48-206ENST00000622647 FOXD1Q16676 465 aa25.4■■□□□ 1.66
ZNF48-206ENST00000622647 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
ZNF48-206ENST00000622647 TCOF1Q13428 1488 aaKnown RBP25.39■■□□□ 1.65
ZNF48-206ENST00000622647 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
ZNF48-206ENST00000622647 KDM6BO15054 1643 aa25.37■■□□□ 1.65
ZNF48-206ENST00000622647 CARMIL2Q6F5E8 1435 aa25.34■■□□□ 1.65
ZNF48-206ENST00000622647 MIA2Q96PC5 1412 aa25.34■■□□□ 1.65
ZNF48-206ENST00000622647 NUP160Q12769 1436 aa25.34■■□□□ 1.65
ZNF48-206ENST00000622647 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
ZNF48-206ENST00000622647 TIMELESSQ9UNS1 1208 aa25.3■■□□□ 1.64
ZNF48-206ENST00000622647 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
ZNF48-206ENST00000622647 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms