RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 IGF1RP08069 1367 aa22.8■■□□□ 1.24
DKC1-213ENST00000620277 MYT1Q01538 1121 aa22.8■■□□□ 1.24
DKC1-213ENST00000620277 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
DKC1-213ENST00000620277 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
DKC1-213ENST00000620277 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
DKC1-213ENST00000620277 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
DKC1-213ENST00000620277 NEFLP07196 543 aa22.73■■□□□ 1.23
DKC1-213ENST00000620277 ANP32CO43423 234 aa22.72■■□□□ 1.23
DKC1-213ENST00000620277 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
DKC1-213ENST00000620277 FHOD3Q2V2M9 1422 aa22.71■■□□□ 1.23
DKC1-213ENST00000620277 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
DKC1-213ENST00000620277 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
DKC1-213ENST00000620277 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
DKC1-213ENST00000620277 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.22
DKC1-213ENST00000620277 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
DKC1-213ENST00000620277 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
DKC1-213ENST00000620277 CFTRP13569 1480 aa22.61■■□□□ 1.21
DKC1-213ENST00000620277 TONSLQ96HA7 1378 aa22.6■■□□□ 1.21
DKC1-213ENST00000620277 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
DKC1-213ENST00000620277 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
DKC1-213ENST00000620277 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.21
DKC1-213ENST00000620277 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.21
DKC1-213ENST00000620277 FOXD1Q16676 465 aa22.58■■□□□ 1.21
DKC1-213ENST00000620277 TIAM1Q13009 1591 aa22.53■■□□□ 1.2
DKC1-213ENST00000620277 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
DKC1-213ENST00000620277 ANP32EQ9BTT0 268 aa22.53■■□□□ 1.2
DKC1-213ENST00000620277 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
DKC1-213ENST00000620277 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
DKC1-213ENST00000620277 RBM19Q9Y4C8 960 aaKnown RBP22.51■■□□□ 1.19
DKC1-213ENST00000620277 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
DKC1-213ENST00000620277 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
DKC1-213ENST00000620277 CCDC184Q52MB2 194 aa22.43■■□□□ 1.18
DKC1-213ENST00000620277 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
DKC1-213ENST00000620277 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
DKC1-213ENST00000620277 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.18
DKC1-213ENST00000620277 HMGXB3Q12766 1538 aa22.39■■□□□ 1.18
DKC1-213ENST00000620277 NESP48681 1621 aa22.39■■□□□ 1.18
DKC1-213ENST00000620277 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
DKC1-213ENST00000620277 PTPRKQ15262 1439 aa22.37■■□□□ 1.17
DKC1-213ENST00000620277 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
DKC1-213ENST00000620277 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
DKC1-213ENST00000620277 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
DKC1-213ENST00000620277 CCDC18Q5T9S5 1454 aa22.31■■□□□ 1.16
DKC1-213ENST00000620277 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.168e-10■■■■□ 22.9
DKC1-213ENST00000620277 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
DKC1-213ENST00000620277 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
DKC1-213ENST00000620277 C11orf95C9JLR9 678 aaPredicted RBP22.27■■□□□ 1.15
DKC1-213ENST00000620277 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
DKC1-213ENST00000620277 L3MBTL2Q969R5 705 aa22.24■■□□□ 1.15
DKC1-213ENST00000620277 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
DKC1-213ENST00000620277 MRS2Q9HD23 443 aa22.24■■□□□ 1.15
DKC1-213ENST00000620277 MSH5O43196 834 aa22.23■■□□□ 1.15
DKC1-213ENST00000620277 ERICH6Q7L0X2 663 aa22.22■■□□□ 1.15
DKC1-213ENST00000620277 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.15
DKC1-213ENST00000620277 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
DKC1-213ENST00000620277 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
DKC1-213ENST00000620277 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
DKC1-213ENST00000620277 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
DKC1-213ENST00000620277 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
DKC1-213ENST00000620277 ZNF644Q9H582 1327 aaPredicted RBP22.16■■□□□ 1.14
DKC1-213ENST00000620277 NAIPQ13075 1403 aa22.15■■□□□ 1.14
DKC1-213ENST00000620277 NCOA2Q15596 1464 aa22.14■■□□□ 1.14
DKC1-213ENST00000620277 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
DKC1-213ENST00000620277 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
DKC1-213ENST00000620277 FMN1Q68DA7 1419 aa22.13■■□□□ 1.13
DKC1-213ENST00000620277 FYCO1Q9BQS8 1478 aa22.13■■□□□ 1.13
DKC1-213ENST00000620277 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
DKC1-213ENST00000620277 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
DKC1-213ENST00000620277 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
DKC1-213ENST00000620277 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
DKC1-213ENST00000620277 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
DKC1-213ENST00000620277 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
DKC1-213ENST00000620277 HFM1A2PYH4 1435 aa22.08■■□□□ 1.13
DKC1-213ENST00000620277 MYOM3Q5VTT5 1437 aa22.07■■□□□ 1.12
DKC1-213ENST00000620277 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
DKC1-213ENST00000620277 CFAP43Q8NDM7 1665 aa22.05■■□□□ 1.12
DKC1-213ENST00000620277 FBLN2P98095 1184 aa22.03■■□□□ 1.12
DKC1-213ENST00000620277 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.12
DKC1-213ENST00000620277 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
DKC1-213ENST00000620277 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
DKC1-213ENST00000620277 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
DKC1-213ENST00000620277 NBR1Q14596 966 aa21.99■■□□□ 1.11
DKC1-213ENST00000620277 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
DKC1-213ENST00000620277 PPP4R2Q9NY27 417 aa21.95■■□□□ 1.1
DKC1-213ENST00000620277 CDK13Q14004 1512 aaKnown RBP21.95■■□□□ 1.1
DKC1-213ENST00000620277 KIF7Q2M1P5 1343 aa21.94■■□□□ 1.1
DKC1-213ENST00000620277 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
DKC1-213ENST00000620277 KDM6BO15054 1643 aa21.94■■□□□ 1.1
DKC1-213ENST00000620277 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
DKC1-213ENST00000620277 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
DKC1-213ENST00000620277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.92■■□□□ 1.18e-7■■■□□ 19.1
DKC1-213ENST00000620277 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
DKC1-213ENST00000620277 CCDC7Q96M83 1385 aa21.92■■□□□ 1.1
DKC1-213ENST00000620277 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
DKC1-213ENST00000620277 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
DKC1-213ENST00000620277 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
DKC1-213ENST00000620277 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
DKC1-213ENST00000620277 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
DKC1-213ENST00000620277 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
DKC1-213ENST00000620277 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms