RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-223ENST00000619644 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
SMTN-223ENST00000619644 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
SMTN-223ENST00000619644 BCANQ96GW7 911 aa20.66■□□□□ 0.9
SMTN-223ENST00000619644 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
SMTN-223ENST00000619644 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
SMTN-223ENST00000619644 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
SMTN-223ENST00000619644 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
SMTN-223ENST00000619644 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.89
SMTN-223ENST00000619644 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
SMTN-223ENST00000619644 TIAM1Q13009 1591 aa20.53■□□□□ 0.88
SMTN-223ENST00000619644 LRRC9Q6ZRR7 1453 aa20.53■□□□□ 0.88
SMTN-223ENST00000619644 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
SMTN-223ENST00000619644 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
SMTN-223ENST00000619644 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
SMTN-223ENST00000619644 FKBP8Q14318 412 aa20.47■□□□□ 0.87
SMTN-223ENST00000619644 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
SMTN-223ENST00000619644 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
SMTN-223ENST00000619644 ANP32CO43423 234 aa20.42■□□□□ 0.86
SMTN-223ENST00000619644 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
SMTN-223ENST00000619644 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
SMTN-223ENST00000619644 TONSLQ96HA7 1378 aa20.39■□□□□ 0.86
SMTN-223ENST00000619644 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
SMTN-223ENST00000619644 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
SMTN-223ENST00000619644 NEFLP07196 543 aa20.38■□□□□ 0.85
SMTN-223ENST00000619644 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
SMTN-223ENST00000619644 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
SMTN-223ENST00000619644 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
SMTN-223ENST00000619644 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
SMTN-223ENST00000619644 NESP48681 1621 aa20.32■□□□□ 0.84
SMTN-223ENST00000619644 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
SMTN-223ENST00000619644 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
SMTN-223ENST00000619644 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
SMTN-223ENST00000619644 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
SMTN-223ENST00000619644 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
SMTN-223ENST00000619644 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
SMTN-223ENST00000619644 CASKIN1Q8WXD9 1431 aa20.24■□□□□ 0.83
SMTN-223ENST00000619644 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
SMTN-223ENST00000619644 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
SMTN-223ENST00000619644 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
SMTN-223ENST00000619644 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
SMTN-223ENST00000619644 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
SMTN-223ENST00000619644 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
SMTN-223ENST00000619644 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
SMTN-223ENST00000619644 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMTN-223ENST00000619644 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
SMTN-223ENST00000619644 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
SMTN-223ENST00000619644 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
SMTN-223ENST00000619644 PTPRKQ15262 1439 aa20.17■□□□□ 0.82
SMTN-223ENST00000619644 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
SMTN-223ENST00000619644 FOXD1Q16676 465 aa20.15■□□□□ 0.82
SMTN-223ENST00000619644 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.81
SMTN-223ENST00000619644 MSH5O43196 834 aa20.13■□□□□ 0.81
SMTN-223ENST00000619644 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
SMTN-223ENST00000619644 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
SMTN-223ENST00000619644 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
SMTN-223ENST00000619644 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.81
SMTN-223ENST00000619644 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
SMTN-223ENST00000619644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMTN-223ENST00000619644 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
SMTN-223ENST00000619644 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.86e-8■■■■■ 47.6
SMTN-223ENST00000619644 NAIPQ13075 1403 aa20.06■□□□□ 0.8
SMTN-223ENST00000619644 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
SMTN-223ENST00000619644 POLR3GLQ9BT43 218 aa20.05■□□□□ 0.8
SMTN-223ENST00000619644 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
SMTN-223ENST00000619644 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
SMTN-223ENST00000619644 CUL7Q14999 1698 aa20.04■□□□□ 0.8
SMTN-223ENST00000619644 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
SMTN-223ENST00000619644 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
SMTN-223ENST00000619644 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMTN-223ENST00000619644 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.8
SMTN-223ENST00000619644 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
SMTN-223ENST00000619644 MPHOSPH9Q99550 1183 aa19.99■□□□□ 0.79
SMTN-223ENST00000619644 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
SMTN-223ENST00000619644 L3MBTL2Q969R5 705 aa19.98■□□□□ 0.79
SMTN-223ENST00000619644 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
SMTN-223ENST00000619644 ERICH6Q7L0X2 663 aa19.96■□□□□ 0.79
SMTN-223ENST00000619644 CCDC184Q52MB2 194 aa19.95■□□□□ 0.78
SMTN-223ENST00000619644 SUPT6HQ7KZ85 1726 aaKnown RBP19.94■□□□□ 0.78
SMTN-223ENST00000619644 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
SMTN-223ENST00000619644 SENP3-EIF4A1A0A087X0R7 540 aa19.93■□□□□ 0.78
SMTN-223ENST00000619644 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
SMTN-223ENST00000619644 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
SMTN-223ENST00000619644 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
SMTN-223ENST00000619644 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
SMTN-223ENST00000619644 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
SMTN-223ENST00000619644 EHBP1L1Q8N3D4 1523 aa19.9■□□□□ 0.78
SMTN-223ENST00000619644 ZNF644Q9H582 1327 aaPredicted RBP19.9■□□□□ 0.78
SMTN-223ENST00000619644 LRRIQ1Q96JM4 1722 aa19.89■□□□□ 0.78
SMTN-223ENST00000619644 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
SMTN-223ENST00000619644 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
SMTN-223ENST00000619644 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
SMTN-223ENST00000619644 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
SMTN-223ENST00000619644 UGGT2Q9NYU1 1516 aa19.84■□□□□ 0.77
SMTN-223ENST00000619644 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.77
SMTN-223ENST00000619644 FBLN2P98095 1184 aa19.83■□□□□ 0.76
SMTN-223ENST00000619644 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
SMTN-223ENST00000619644 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
SMTN-223ENST00000619644 KDM6BO15054 1643 aa19.82■□□□□ 0.76
SMTN-223ENST00000619644 PRKRIP1Q9H875 184 aaPredicted RBP19.81■□□□□ 0.76
SMTN-223ENST00000619644 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms