RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 PLEKHD1A6NEE1 506 aa14.78□□□□□ -0.04
HNF4A-209ENST00000619550 TSHZ2Q9NRE2 1034 aa14.78□□□□□ -0.04
HNF4A-209ENST00000619550 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
HNF4A-209ENST00000619550 NEFMP07197 916 aa14.77□□□□□ -0.04
HNF4A-209ENST00000619550 RBM19Q9Y4C8 960 aaKnown RBP14.77□□□□□ -0.04
HNF4A-209ENST00000619550 DEKP35659 375 aaKnown RBP14.75□□□□□ -0.05
HNF4A-209ENST00000619550 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
HNF4A-209ENST00000619550 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
HNF4A-209ENST00000619550 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
HNF4A-209ENST00000619550 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.06
HNF4A-209ENST00000619550 PPP4R2Q9NY27 417 aa14.7□□□□□ -0.06
HNF4A-209ENST00000619550 CHGAP10645 457 aaKnown RBP14.7□□□□□ -0.06
HNF4A-209ENST00000619550 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
HNF4A-209ENST00000619550 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
HNF4A-209ENST00000619550 ANP32BQ92688 251 aaKnown RBP14.68□□□□□ -0.06
HNF4A-209ENST00000619550 NOP58Q9Y2X3 529 aaKnown RBP14.68□□□□□ -0.06
HNF4A-209ENST00000619550 CHIC2Q9UKJ5 165 aa14.66□□□□□ -0.06
HNF4A-209ENST00000619550 DDRGK1Q96HY6 314 aa14.66□□□□□ -0.06
HNF4A-209ENST00000619550 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
HNF4A-209ENST00000619550 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
HNF4A-209ENST00000619550 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
HNF4A-209ENST00000619550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.071e-8■□□□□ 10
HNF4A-209ENST00000619550 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
HNF4A-209ENST00000619550 CCER2I3L3R5 266 aa14.63□□□□□ -0.07
HNF4A-209ENST00000619550 EIF4G2P78344 907 aaKnown RBP eCLIP14.62□□□□□ -0.07
HNF4A-209ENST00000619550 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
HNF4A-209ENST00000619550 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
HNF4A-209ENST00000619550 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
HNF4A-209ENST00000619550 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
HNF4A-209ENST00000619550 CUX2O14529 1486 aa14.59□□□□□ -0.07
HNF4A-209ENST00000619550 CFDP1Q9UEE9 299 aaPredicted RBP14.59□□□□□ -0.07
HNF4A-209ENST00000619550 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
HNF4A-209ENST00000619550 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
HNF4A-209ENST00000619550 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
HNF4A-209ENST00000619550 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
HNF4A-209ENST00000619550 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
HNF4A-209ENST00000619550 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.54□□□□□ -0.08
HNF4A-209ENST00000619550 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
HNF4A-209ENST00000619550 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
HNF4A-209ENST00000619550 B4GALNT3Q6L9W6 998 aa14.52□□□□□ -0.09
HNF4A-209ENST00000619550 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
HNF4A-209ENST00000619550 SOGA1O94964 1423 aa14.49□□□□□ -0.09
HNF4A-209ENST00000619550 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
HNF4A-209ENST00000619550 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
HNF4A-209ENST00000619550 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
HNF4A-209ENST00000619550 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
HNF4A-209ENST00000619550 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
HNF4A-209ENST00000619550 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
HNF4A-209ENST00000619550 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
HNF4A-209ENST00000619550 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
HNF4A-209ENST00000619550 NAP1L5Q96NT1 182 aaPredicted RBP14.44□□□□□ -0.1
HNF4A-209ENST00000619550 NCLP19338 710 aaKnown RBP14.44□□□□□ -0.1
HNF4A-209ENST00000619550 BECN1Q14457 450 aa14.44□□□□□ -0.1
HNF4A-209ENST00000619550 KDM2AQ9Y2K7 1162 aa14.44□□□□□ -0.1
HNF4A-209ENST00000619550 FANCIQ9NVI1 1328 aa14.43□□□□□ -0.1
HNF4A-209ENST00000619550 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
HNF4A-209ENST00000619550 TRIM44Q96DX7 344 aaPredicted RBP14.43□□□□□ -0.1
HNF4A-209ENST00000619550 ARXQ96QS3 562 aa14.42□□□□□ -0.1
HNF4A-209ENST00000619550 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
HNF4A-209ENST00000619550 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
HNF4A-209ENST00000619550 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
HNF4A-209ENST00000619550 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
HNF4A-209ENST00000619550 CDCA8Q53HL2 280 aa14.39□□□□□ -0.11
HNF4A-209ENST00000619550 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
HNF4A-209ENST00000619550 WIZO95785 1651 aa14.39□□□□□ -0.11
HNF4A-209ENST00000619550 L1TD1Q5T7N2 865 aaKnown RBP14.37□□□□□ -0.11
HNF4A-209ENST00000619550 WDR43Q15061 677 aaKnown RBP eCLIP14.37□□□□□ -0.113e-15■■□□□ 11.4
HNF4A-209ENST00000619550 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
HNF4A-209ENST00000619550 FMN1Q68DA7 1419 aa14.37□□□□□ -0.11
HNF4A-209ENST00000619550 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
HNF4A-209ENST00000619550 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
HNF4A-209ENST00000619550 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.35□□□□□ -0.11
HNF4A-209ENST00000619550 IPO9Q96P70 1041 aaKnown RBP14.34□□□□□ -0.11
HNF4A-209ENST00000619550 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
HNF4A-209ENST00000619550 KANK1Q14678 1352 aa14.31□□□□□ -0.12
HNF4A-209ENST00000619550 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
HNF4A-209ENST00000619550 RGL3Q3MIN7 710 aa14.3□□□□□ -0.12
HNF4A-209ENST00000619550 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
HNF4A-209ENST00000619550 HDGFP51858 240 aaKnown RBP14.29□□□□□ -0.12
HNF4A-209ENST00000619550 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
HNF4A-209ENST00000619550 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
HNF4A-209ENST00000619550 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
HNF4A-209ENST00000619550 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.12
HNF4A-209ENST00000619550 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
HNF4A-209ENST00000619550 HMGXB3Q12766 1538 aa14.27□□□□□ -0.13
HNF4A-209ENST00000619550 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
HNF4A-209ENST00000619550 C14orf37Q86TY3 774 aa14.26□□□□□ -0.13
HNF4A-209ENST00000619550 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
HNF4A-209ENST00000619550 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
HNF4A-209ENST00000619550 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
HNF4A-209ENST00000619550 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
HNF4A-209ENST00000619550 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
HNF4A-209ENST00000619550 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
HNF4A-209ENST00000619550 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
HNF4A-209ENST00000619550 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
HNF4A-209ENST00000619550 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
HNF4A-209ENST00000619550 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.13
HNF4A-209ENST00000619550 RGS3P49796 1198 aa14.21□□□□□ -0.14
HNF4A-209ENST00000619550 HSP90AA2PQ14568 343 aaPredicted RBP14.2□□□□□ -0.14
HNF4A-209ENST00000619550 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms