RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
C11orf54-215ENST00000617482 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
C11orf54-215ENST00000617482 NESP48681 1621 aa17.14■□□□□ 0.33
C11orf54-215ENST00000617482 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
C11orf54-215ENST00000617482 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
C11orf54-215ENST00000617482 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
C11orf54-215ENST00000617482 PHLDB1Q86UU1 1377 aa17.1■□□□□ 0.33
C11orf54-215ENST00000617482 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
C11orf54-215ENST00000617482 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
C11orf54-215ENST00000617482 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
C11orf54-215ENST00000617482 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
C11orf54-215ENST00000617482 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
C11orf54-215ENST00000617482 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
C11orf54-215ENST00000617482 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
C11orf54-215ENST00000617482 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
C11orf54-215ENST00000617482 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
C11orf54-215ENST00000617482 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
C11orf54-215ENST00000617482 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
C11orf54-215ENST00000617482 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
C11orf54-215ENST00000617482 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
C11orf54-215ENST00000617482 KCNH8Q96L42 1107 aa16.95■□□□□ 0.3
C11orf54-215ENST00000617482 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
C11orf54-215ENST00000617482 CFAP43Q8NDM7 1665 aa16.91■□□□□ 0.3
C11orf54-215ENST00000617482 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
C11orf54-215ENST00000617482 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
C11orf54-215ENST00000617482 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
C11orf54-215ENST00000617482 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
C11orf54-215ENST00000617482 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
C11orf54-215ENST00000617482 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
C11orf54-215ENST00000617482 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
C11orf54-215ENST00000617482 EFCAB5A4FU69 1503 aa16.88■□□□□ 0.29
C11orf54-215ENST00000617482 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
C11orf54-215ENST00000617482 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
C11orf54-215ENST00000617482 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
C11orf54-215ENST00000617482 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
C11orf54-215ENST00000617482 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
C11orf54-215ENST00000617482 CUL7Q14999 1698 aa16.83■□□□□ 0.29
C11orf54-215ENST00000617482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
C11orf54-215ENST00000617482 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
C11orf54-215ENST00000617482 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
C11orf54-215ENST00000617482 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
C11orf54-215ENST00000617482 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
C11orf54-215ENST00000617482 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
C11orf54-215ENST00000617482 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
C11orf54-215ENST00000617482 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
C11orf54-215ENST00000617482 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
C11orf54-215ENST00000617482 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
C11orf54-215ENST00000617482 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
C11orf54-215ENST00000617482 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
C11orf54-215ENST00000617482 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
C11orf54-215ENST00000617482 NCOA2Q15596 1464 aa16.72■□□□□ 0.27
C11orf54-215ENST00000617482 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
C11orf54-215ENST00000617482 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
C11orf54-215ENST00000617482 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
C11orf54-215ENST00000617482 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
C11orf54-215ENST00000617482 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
C11orf54-215ENST00000617482 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
C11orf54-215ENST00000617482 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
C11orf54-215ENST00000617482 ANP32CO43423 234 aa16.69■□□□□ 0.26
C11orf54-215ENST00000617482 NAIPQ13075 1403 aa16.69■□□□□ 0.26
C11orf54-215ENST00000617482 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
C11orf54-215ENST00000617482 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
C11orf54-215ENST00000617482 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
C11orf54-215ENST00000617482 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
C11orf54-215ENST00000617482 BCANQ96GW7 911 aa16.66■□□□□ 0.26
C11orf54-215ENST00000617482 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
C11orf54-215ENST00000617482 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
C11orf54-215ENST00000617482 FKBP8Q14318 412 aa16.63■□□□□ 0.25
C11orf54-215ENST00000617482 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
C11orf54-215ENST00000617482 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
C11orf54-215ENST00000617482 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
C11orf54-215ENST00000617482 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
C11orf54-215ENST00000617482 UGGT2Q9NYU1 1516 aa16.59■□□□□ 0.25
C11orf54-215ENST00000617482 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
C11orf54-215ENST00000617482 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
C11orf54-215ENST00000617482 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
C11orf54-215ENST00000617482 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
C11orf54-215ENST00000617482 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
C11orf54-215ENST00000617482 FOXD1Q16676 465 aa16.53■□□□□ 0.24
C11orf54-215ENST00000617482 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
C11orf54-215ENST00000617482 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
C11orf54-215ENST00000617482 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
C11orf54-215ENST00000617482 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.24
C11orf54-215ENST00000617482 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
C11orf54-215ENST00000617482 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.24
C11orf54-215ENST00000617482 NEFLP07196 543 aa16.51■□□□□ 0.23
C11orf54-215ENST00000617482 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
C11orf54-215ENST00000617482 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
C11orf54-215ENST00000617482 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
C11orf54-215ENST00000617482 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
C11orf54-215ENST00000617482 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
C11orf54-215ENST00000617482 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
C11orf54-215ENST00000617482 KDM6BO15054 1643 aa16.48■□□□□ 0.23
C11orf54-215ENST00000617482 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
C11orf54-215ENST00000617482 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
C11orf54-215ENST00000617482 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
C11orf54-215ENST00000617482 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
C11orf54-215ENST00000617482 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
C11orf54-215ENST00000617482 WDR62O43379 1518 aa16.43■□□□□ 0.22
C11orf54-215ENST00000617482 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms