RNA–Protein interactions for RNA: ENST00000617366.4

HNF1A-216, Transcript of HNF1 homeobox A, humanhuman

TSL 1 (best) BASIC

Gene HNF1A, Length 2,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF1A-216ENST00000617366 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
HNF1A-216ENST00000617366 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
HNF1A-216ENST00000617366 CUX2O14529 1486 aa24.46■■□□□ 1.51
HNF1A-216ENST00000617366 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
HNF1A-216ENST00000617366 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
HNF1A-216ENST00000617366 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
HNF1A-216ENST00000617366 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
HNF1A-216ENST00000617366 SIN3AQ96ST3 1273 aa24.38■■□□□ 1.49
HNF1A-216ENST00000617366 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
HNF1A-216ENST00000617366 IGF1RP08069 1367 aa24.37■■□□□ 1.49
HNF1A-216ENST00000617366 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
HNF1A-216ENST00000617366 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.48
HNF1A-216ENST00000617366 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
HNF1A-216ENST00000617366 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
HNF1A-216ENST00000617366 PHLDB1Q86UU1 1377 aa24.3■■□□□ 1.48
HNF1A-216ENST00000617366 DDX10Q13206 875 aaKnown RBP24.29■■□□□ 1.48
HNF1A-216ENST00000617366 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
HNF1A-216ENST00000617366 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
HNF1A-216ENST00000617366 TSHZ2Q9NRE2 1034 aa24.26■■□□□ 1.47
HNF1A-216ENST00000617366 BCANQ96GW7 911 aa24.25■■□□□ 1.47
HNF1A-216ENST00000617366 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
HNF1A-216ENST00000617366 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
HNF1A-216ENST00000617366 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
HNF1A-216ENST00000617366 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
HNF1A-216ENST00000617366 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
HNF1A-216ENST00000617366 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
HNF1A-216ENST00000617366 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
HNF1A-216ENST00000617366 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
HNF1A-216ENST00000617366 FKBP8Q14318 412 aa24.1■■□□□ 1.45
HNF1A-216ENST00000617366 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
HNF1A-216ENST00000617366 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
HNF1A-216ENST00000617366 MAP3K1Q13233 1512 aa24.09■■□□□ 1.45
HNF1A-216ENST00000617366 WDR62O43379 1518 aa24.08■■□□□ 1.45
HNF1A-216ENST00000617366 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.45
HNF1A-216ENST00000617366 FHOD3Q2V2M9 1422 aa24.08■■□□□ 1.45
HNF1A-216ENST00000617366 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
HNF1A-216ENST00000617366 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
HNF1A-216ENST00000617366 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
HNF1A-216ENST00000617366 CUL7Q14999 1698 aa23.99■■□□□ 1.43
HNF1A-216ENST00000617366 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
HNF1A-216ENST00000617366 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.432e-6■■■■■ 28.5
HNF1A-216ENST00000617366 CFAP43Q8NDM7 1665 aa23.97■■□□□ 1.43
HNF1A-216ENST00000617366 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
HNF1A-216ENST00000617366 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
HNF1A-216ENST00000617366 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
HNF1A-216ENST00000617366 ANP32CO43423 234 aa23.88■■□□□ 1.41
HNF1A-216ENST00000617366 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
HNF1A-216ENST00000617366 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
HNF1A-216ENST00000617366 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
HNF1A-216ENST00000617366 ANP32EQ9BTT0 268 aa23.85■■□□□ 1.41
HNF1A-216ENST00000617366 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
HNF1A-216ENST00000617366 FGD6Q6ZV73 1430 aa23.83■■□□□ 1.4
HNF1A-216ENST00000617366 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
HNF1A-216ENST00000617366 CCER2I3L3R5 266 aa23.82■■□□□ 1.4
HNF1A-216ENST00000617366 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
HNF1A-216ENST00000617366 CCDC18Q5T9S5 1454 aa23.8■■□□□ 1.4
HNF1A-216ENST00000617366 NEFLP07196 543 aa23.77■■□□□ 1.4
HNF1A-216ENST00000617366 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
HNF1A-216ENST00000617366 RBM19Q9Y4C8 960 aaKnown RBP23.74■■□□□ 1.39
HNF1A-216ENST00000617366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
HNF1A-216ENST00000617366 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
HNF1A-216ENST00000617366 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
HNF1A-216ENST00000617366 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
HNF1A-216ENST00000617366 EFCAB5A4FU69 1503 aa23.72■■□□□ 1.39
HNF1A-216ENST00000617366 IRX6P78412 446 aaPredicted RBP23.72■■□□□ 1.39
HNF1A-216ENST00000617366 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
HNF1A-216ENST00000617366 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
HNF1A-216ENST00000617366 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.38
HNF1A-216ENST00000617366 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
HNF1A-216ENST00000617366 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.38
HNF1A-216ENST00000617366 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
HNF1A-216ENST00000617366 NAIPQ13075 1403 aa23.69■■□□□ 1.38
HNF1A-216ENST00000617366 UACAQ9BZF9 1416 aa23.69■■□□□ 1.38
HNF1A-216ENST00000617366 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
HNF1A-216ENST00000617366 NCOA2Q15596 1464 aa23.66■■□□□ 1.38
HNF1A-216ENST00000617366 KDM5BQ9UGL1 1544 aa23.66■■□□□ 1.38
HNF1A-216ENST00000617366 HNRNPUQ00839 825 aaKnown RBP eCLIP23.65■■□□□ 1.38
HNF1A-216ENST00000617366 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
HNF1A-216ENST00000617366 WASHC2AQ641Q2 1341 aa23.61■■□□□ 1.37
HNF1A-216ENST00000617366 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
HNF1A-216ENST00000617366 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
HNF1A-216ENST00000617366 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
HNF1A-216ENST00000617366 MYOM3Q5VTT5 1437 aa23.6■■□□□ 1.37
HNF1A-216ENST00000617366 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
HNF1A-216ENST00000617366 FOXD1Q16676 465 aa23.59■■□□□ 1.37
HNF1A-216ENST00000617366 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
HNF1A-216ENST00000617366 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
HNF1A-216ENST00000617366 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
HNF1A-216ENST00000617366 MAGI3Q5TCQ9 1506 aa23.56■■□□□ 1.36
HNF1A-216ENST00000617366 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
HNF1A-216ENST00000617366 FBLN2P98095 1184 aa23.54■■□□□ 1.36
HNF1A-216ENST00000617366 MSH5O43196 834 aa23.54■■□□□ 1.36
HNF1A-216ENST00000617366 SAMD9Q5K651 1589 aa23.54■■□□□ 1.36
HNF1A-216ENST00000617366 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
HNF1A-216ENST00000617366 C11orf95C9JLR9 678 aaPredicted RBP23.53■■□□□ 1.36
HNF1A-216ENST00000617366 KDM6BO15054 1643 aa23.52■■□□□ 1.36
HNF1A-216ENST00000617366 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
HNF1A-216ENST00000617366 SUPT6HQ7KZ85 1726 aaKnown RBP23.48■■□□□ 1.35
HNF1A-216ENST00000617366 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
HNF1A-216ENST00000617366 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms