RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 FHAD1B1AJZ9 1412 aa25.23■■□□□ 1.63
DDX1-207ENST00000617198 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.63
DDX1-207ENST00000617198 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.63
DDX1-207ENST00000617198 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
DDX1-207ENST00000617198 SUPT16HQ9Y5B9 1047 aaKnown RBP25.15■■□□□ 1.62
DDX1-207ENST00000617198 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
DDX1-207ENST00000617198 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
DDX1-207ENST00000617198 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
DDX1-207ENST00000617198 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
DDX1-207ENST00000617198 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
DDX1-207ENST00000617198 EFCAB5A4FU69 1503 aa25.04■■□□□ 1.6
DDX1-207ENST00000617198 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
DDX1-207ENST00000617198 TIMELESSQ9UNS1 1208 aa25.03■■□□□ 1.6
DDX1-207ENST00000617198 SIN3AQ96ST3 1273 aa25.02■■□□□ 1.6
DDX1-207ENST00000617198 FHOD3Q2V2M9 1422 aa25.02■■□□□ 1.6
DDX1-207ENST00000617198 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
DDX1-207ENST00000617198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.01■■□□□ 1.59
DDX1-207ENST00000617198 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.597e-7■■■■□ 24.5
DDX1-207ENST00000617198 CASKIN1Q8WXD9 1431 aa25.01■■□□□ 1.59
DDX1-207ENST00000617198 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
DDX1-207ENST00000617198 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
DDX1-207ENST00000617198 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
DDX1-207ENST00000617198 CUL7Q14999 1698 aa24.97■■□□□ 1.59
DDX1-207ENST00000617198 KCNH8Q96L42 1107 aa24.97■■□□□ 1.59
DDX1-207ENST00000617198 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.59
DDX1-207ENST00000617198 CTTNBP2Q8WZ74 1663 aa24.95■■□□□ 1.58
DDX1-207ENST00000617198 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
DDX1-207ENST00000617198 DDX10Q13206 875 aaKnown RBP24.93■■□□□ 1.58
DDX1-207ENST00000617198 FMN1Q68DA7 1419 aa24.89■■□□□ 1.58
DDX1-207ENST00000617198 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
DDX1-207ENST00000617198 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
DDX1-207ENST00000617198 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
DDX1-207ENST00000617198 CCDC18Q5T9S5 1454 aa24.79■■□□□ 1.56
DDX1-207ENST00000617198 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
DDX1-207ENST00000617198 NESP48681 1621 aa24.78■■□□□ 1.56
DDX1-207ENST00000617198 TSHZ2Q9NRE2 1034 aa24.78■■□□□ 1.56
DDX1-207ENST00000617198 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
DDX1-207ENST00000617198 CCER2I3L3R5 266 aa24.76■■□□□ 1.55
DDX1-207ENST00000617198 SAMD9Q5K651 1589 aa24.75■■□□□ 1.55
DDX1-207ENST00000617198 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
DDX1-207ENST00000617198 UACAQ9BZF9 1416 aa24.75■■□□□ 1.55
DDX1-207ENST00000617198 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
DDX1-207ENST00000617198 PTPN23Q9H3S7 1636 aa24.73■■□□□ 1.55
DDX1-207ENST00000617198 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
DDX1-207ENST00000617198 ANP32CO43423 234 aa24.72■■□□□ 1.55
DDX1-207ENST00000617198 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
DDX1-207ENST00000617198 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
DDX1-207ENST00000617198 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
DDX1-207ENST00000617198 URB2Q14146 1524 aaKnown RBP24.69■■□□□ 1.54
DDX1-207ENST00000617198 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
DDX1-207ENST00000617198 GRIN2BQ13224 1484 aa24.69■■□□□ 1.54
DDX1-207ENST00000617198 NCOA2Q15596 1464 aa24.69■■□□□ 1.54
DDX1-207ENST00000617198 NAIPQ13075 1403 aa24.67■■□□□ 1.54
DDX1-207ENST00000617198 FKBP8Q14318 412 aa24.66■■□□□ 1.54
DDX1-207ENST00000617198 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
DDX1-207ENST00000617198 LAMC3Q9Y6N6 1575 aa24.66■■□□□ 1.54
DDX1-207ENST00000617198 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.54
DDX1-207ENST00000617198 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
DDX1-207ENST00000617198 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
DDX1-207ENST00000617198 BCANQ96GW7 911 aa24.62■■□□□ 1.53
DDX1-207ENST00000617198 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
DDX1-207ENST00000617198 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
DDX1-207ENST00000617198 NEFLP07196 543 aa24.58■■□□□ 1.52
DDX1-207ENST00000617198 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
DDX1-207ENST00000617198 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
DDX1-207ENST00000617198 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
DDX1-207ENST00000617198 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
DDX1-207ENST00000617198 TCOF1Q13428 1488 aaKnown RBP24.5■■□□□ 1.51
DDX1-207ENST00000617198 GCC2Q8IWJ2 1684 aa24.5■■□□□ 1.51
DDX1-207ENST00000617198 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
DDX1-207ENST00000617198 HECW1Q76N89 1606 aa24.47■■□□□ 1.51
DDX1-207ENST00000617198 AKNAQ7Z591 1439 aa24.45■■□□□ 1.5
DDX1-207ENST00000617198 RRP7BPQ9NSQ0 103 aa24.44■■□□□ 1.5
DDX1-207ENST00000617198 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
DDX1-207ENST00000617198 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
DDX1-207ENST00000617198 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
DDX1-207ENST00000617198 CHIC2Q9UKJ5 165 aa24.4■■□□□ 1.5
DDX1-207ENST00000617198 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
DDX1-207ENST00000617198 MIA2Q96PC5 1412 aa24.38■■□□□ 1.49
DDX1-207ENST00000617198 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
DDX1-207ENST00000617198 WASHC2AQ641Q2 1341 aa24.37■■□□□ 1.49
DDX1-207ENST00000617198 IQGAP2Q13576 1575 aa24.36■■□□□ 1.49
DDX1-207ENST00000617198 KDM6BO15054 1643 aa24.36■■□□□ 1.49
DDX1-207ENST00000617198 PBRM1Q86U86 1689 aa24.35■■□□□ 1.49
DDX1-207ENST00000617198 EIF4G2P78344 907 aaKnown RBP eCLIP24.32■■□□□ 1.48
DDX1-207ENST00000617198 HNRNPUQ00839 825 aaKnown RBP eCLIP24.32■■□□□ 1.48
DDX1-207ENST00000617198 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
DDX1-207ENST00000617198 CDK13Q14004 1512 aaKnown RBP24.31■■□□□ 1.48
DDX1-207ENST00000617198 WDR62O43379 1518 aa24.3■■□□□ 1.48
DDX1-207ENST00000617198 RBM19Q9Y4C8 960 aaKnown RBP24.3■■□□□ 1.48
DDX1-207ENST00000617198 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
DDX1-207ENST00000617198 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.47
DDX1-207ENST00000617198 L3MBTL2Q969R5 705 aa24.25■■□□□ 1.47
DDX1-207ENST00000617198 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
DDX1-207ENST00000617198 NCOA1Q15788 1441 aa24.21■■□□□ 1.47
DDX1-207ENST00000617198 DAPK1P53355 1430 aa24.19■■□□□ 1.46
DDX1-207ENST00000617198 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
DDX1-207ENST00000617198 FOXD1Q16676 465 aa24.18■■□□□ 1.46
DDX1-207ENST00000617198 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
DDX1-207ENST00000617198 CCDC7Q96M83 1385 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms