RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
AP003900.1-202ENST00000616952 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
AP003900.1-202ENST00000616952 SOGA1O94964 1423 aa20.22■□□□□ 0.83
AP003900.1-202ENST00000616952 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
AP003900.1-202ENST00000616952 ADGRL1O94910 1474 aa20.2■□□□□ 0.82
AP003900.1-202ENST00000616952 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
AP003900.1-202ENST00000616952 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
AP003900.1-202ENST00000616952 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
AP003900.1-202ENST00000616952 DIP2BQ9P265 1576 aa20.14■□□□□ 0.81
AP003900.1-202ENST00000616952 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
AP003900.1-202ENST00000616952 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
AP003900.1-202ENST00000616952 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
AP003900.1-202ENST00000616952 SOCS7O14512 581 aa20.07■□□□□ 0.8
AP003900.1-202ENST00000616952 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
AP003900.1-202ENST00000616952 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
AP003900.1-202ENST00000616952 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
AP003900.1-202ENST00000616952 SHROOM2Q13796 1616 aa20.03■□□□□ 0.8
AP003900.1-202ENST00000616952 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
AP003900.1-202ENST00000616952 NUP160Q12769 1436 aa19.98■□□□□ 0.79
AP003900.1-202ENST00000616952 ILDR2Q71H61 639 aa19.95■□□□□ 0.78
AP003900.1-202ENST00000616952 TSPOAP1O95153 1857 aa19.94■□□□□ 0.78
AP003900.1-202ENST00000616952 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
AP003900.1-202ENST00000616952 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
AP003900.1-202ENST00000616952 PRG4Q92954 1404 aaPredicted RBP19.86■□□□□ 0.77
AP003900.1-202ENST00000616952 CUX1P39880 1505 aa19.85■□□□□ 0.77
AP003900.1-202ENST00000616952 DISP3Q9P2K9 1392 aa19.84■□□□□ 0.77
AP003900.1-202ENST00000616952 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
AP003900.1-202ENST00000616952 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
AP003900.1-202ENST00000616952 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
AP003900.1-202ENST00000616952 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
AP003900.1-202ENST00000616952 PPRC1Q5VV67 1664 aaKnown RBP19.74■□□□□ 0.75
AP003900.1-202ENST00000616952 CACNB1Q02641 598 aaPredicted RBP19.73■□□□□ 0.75
AP003900.1-202ENST00000616952 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
AP003900.1-202ENST00000616952 COL17A1Q9UMD9 1497 aaPredicted RBP19.71■□□□□ 0.75
AP003900.1-202ENST00000616952 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
AP003900.1-202ENST00000616952 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
AP003900.1-202ENST00000616952 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
AP003900.1-202ENST00000616952 GLI2P10070 1586 aa19.62■□□□□ 0.73
AP003900.1-202ENST00000616952 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
AP003900.1-202ENST00000616952 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
AP003900.1-202ENST00000616952 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
AP003900.1-202ENST00000616952 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
AP003900.1-202ENST00000616952 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.72
AP003900.1-202ENST00000616952 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
AP003900.1-202ENST00000616952 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
AP003900.1-202ENST00000616952 MAP3K4Q9Y6R4 1608 aa19.48■□□□□ 0.71
AP003900.1-202ENST00000616952 ABCC2Q92887 1545 aa19.48■□□□□ 0.71
AP003900.1-202ENST00000616952 CERKQ8TCT0 537 aa19.48■□□□□ 0.71
AP003900.1-202ENST00000616952 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
AP003900.1-202ENST00000616952 PTPRMP28827 1452 aa19.45■□□□□ 0.7
AP003900.1-202ENST00000616952 KIF21BO75037 1637 aa19.43■□□□□ 0.7
AP003900.1-202ENST00000616952 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
AP003900.1-202ENST00000616952 KCNA4P22459 653 aa19.41■□□□□ 0.7
AP003900.1-202ENST00000616952 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
AP003900.1-202ENST00000616952 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
AP003900.1-202ENST00000616952 PTPRGP23470 1445 aa19.35■□□□□ 0.69
AP003900.1-202ENST00000616952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
AP003900.1-202ENST00000616952 CUL7Q14999 1698 aa19.35■□□□□ 0.69
AP003900.1-202ENST00000616952 ADAMTSL3P82987 1691 aa19.33■□□□□ 0.68
AP003900.1-202ENST00000616952 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
AP003900.1-202ENST00000616952 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
AP003900.1-202ENST00000616952 HSPA2P54652 639 aa19.24■□□□□ 0.67
AP003900.1-202ENST00000616952 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
AP003900.1-202ENST00000616952 MADDQ8WXG6 1647 aa19.21■□□□□ 0.67
AP003900.1-202ENST00000616952 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
AP003900.1-202ENST00000616952 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
AP003900.1-202ENST00000616952 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
AP003900.1-202ENST00000616952 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
AP003900.1-202ENST00000616952 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
AP003900.1-202ENST00000616952 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.66
AP003900.1-202ENST00000616952 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
AP003900.1-202ENST00000616952 WDR7Q9Y4E6 1490 aa19.14■□□□□ 0.65
AP003900.1-202ENST00000616952 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
AP003900.1-202ENST00000616952 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
AP003900.1-202ENST00000616952 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
AP003900.1-202ENST00000616952 RIMS1Q86UR5 1692 aaKnown RBP19.07■□□□□ 0.64
AP003900.1-202ENST00000616952 ARID4BQ4LE39 1312 aaPredicted RBP19■□□□□ 0.63
AP003900.1-202ENST00000616952 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
AP003900.1-202ENST00000616952 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
AP003900.1-202ENST00000616952 YEATS2Q9ULM3 1422 aa18.94■□□□□ 0.62
AP003900.1-202ENST00000616952 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
AP003900.1-202ENST00000616952 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
AP003900.1-202ENST00000616952 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
AP003900.1-202ENST00000616952 RAPGEF3O95398 923 aa18.88■□□□□ 0.61
AP003900.1-202ENST00000616952 IGF1RP08069 1367 aa18.88■□□□□ 0.61
AP003900.1-202ENST00000616952 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
AP003900.1-202ENST00000616952 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
AP003900.1-202ENST00000616952 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
AP003900.1-202ENST00000616952 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
AP003900.1-202ENST00000616952 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
AP003900.1-202ENST00000616952 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
AP003900.1-202ENST00000616952 PREX1Q8TCU6 1659 aa18.84■□□□□ 0.61
AP003900.1-202ENST00000616952 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
AP003900.1-202ENST00000616952 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
AP003900.1-202ENST00000616952 KIAA0556O60303 1618 aa18.81■□□□□ 0.6
AP003900.1-202ENST00000616952 PTPRTO14522 1441 aa18.8■□□□□ 0.6
AP003900.1-202ENST00000616952 FANCAO15360 1455 aa18.79■□□□□ 0.6
AP003900.1-202ENST00000616952 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
AP003900.1-202ENST00000616952 UGGT2Q9NYU1 1516 aa18.78■□□□□ 0.6
AP003900.1-202ENST00000616952 NEO1Q92859 1461 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms