RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
AP003900.1-202ENST00000616952 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
AP003900.1-202ENST00000616952 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
AP003900.1-202ENST00000616952 SENP3Q9H4L4 574 aaPredicted RBP26.54■■□□□ 1.84
AP003900.1-202ENST00000616952 ABCC9O60706 1549 aa26.34■■□□□ 1.81
AP003900.1-202ENST00000616952 PHF23Q9BUL5 403 aaPredicted RBP26.16■■□□□ 1.78
AP003900.1-202ENST00000616952 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
AP003900.1-202ENST00000616952 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
AP003900.1-202ENST00000616952 FOXD1Q16676 465 aa24.66■■□□□ 1.54
AP003900.1-202ENST00000616952 DNAJC5Q9H3Z4 198 aa24.66■■□□□ 1.54
AP003900.1-202ENST00000616952 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
AP003900.1-202ENST00000616952 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
AP003900.1-202ENST00000616952 NACADO15069 1562 aa24.02■■□□□ 1.44
AP003900.1-202ENST00000616952 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
AP003900.1-202ENST00000616952 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
AP003900.1-202ENST00000616952 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
AP003900.1-202ENST00000616952 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
AP003900.1-202ENST00000616952 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
AP003900.1-202ENST00000616952 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
AP003900.1-202ENST00000616952 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
AP003900.1-202ENST00000616952 EIF4G1Q04637 1599 aaKnown RBP23.38■■□□□ 1.33
AP003900.1-202ENST00000616952 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
AP003900.1-202ENST00000616952 CUX2O14529 1486 aa23.27■■□□□ 1.32
AP003900.1-202ENST00000616952 MSH5O43196 834 aa23.12■■□□□ 1.29
AP003900.1-202ENST00000616952 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
AP003900.1-202ENST00000616952 PIAS4Q8N2W9 510 aaPredicted RBP23.09■■□□□ 1.29
AP003900.1-202ENST00000616952 ADRA2BP18089 450 aa23.04■■□□□ 1.28
AP003900.1-202ENST00000616952 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
AP003900.1-202ENST00000616952 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
AP003900.1-202ENST00000616952 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
AP003900.1-202ENST00000616952 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
AP003900.1-202ENST00000616952 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
AP003900.1-202ENST00000616952 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
AP003900.1-202ENST00000616952 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
AP003900.1-202ENST00000616952 NESP48681 1621 aa22.26■■□□□ 1.15
AP003900.1-202ENST00000616952 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
AP003900.1-202ENST00000616952 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
AP003900.1-202ENST00000616952 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
AP003900.1-202ENST00000616952 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
AP003900.1-202ENST00000616952 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
AP003900.1-202ENST00000616952 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
AP003900.1-202ENST00000616952 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
AP003900.1-202ENST00000616952 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
AP003900.1-202ENST00000616952 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.08
AP003900.1-202ENST00000616952 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.08
AP003900.1-202ENST00000616952 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.08
AP003900.1-202ENST00000616952 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
AP003900.1-202ENST00000616952 WDR62O43379 1518 aa21.74■■□□□ 1.07
AP003900.1-202ENST00000616952 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
AP003900.1-202ENST00000616952 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
AP003900.1-202ENST00000616952 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
AP003900.1-202ENST00000616952 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
AP003900.1-202ENST00000616952 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
AP003900.1-202ENST00000616952 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
AP003900.1-202ENST00000616952 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
AP003900.1-202ENST00000616952 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
AP003900.1-202ENST00000616952 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
AP003900.1-202ENST00000616952 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
AP003900.1-202ENST00000616952 ILDR1Q86SU0 546 aaPredicted RBP21.32■■□□□ 1
AP003900.1-202ENST00000616952 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
AP003900.1-202ENST00000616952 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
AP003900.1-202ENST00000616952 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
AP003900.1-202ENST00000616952 MAPK8IP2Q13387 824 aaPredicted RBP21.11■□□□□ 0.97
AP003900.1-202ENST00000616952 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
AP003900.1-202ENST00000616952 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
AP003900.1-202ENST00000616952 DMRT2Q9Y5R5 561 aa21.05■□□□□ 0.96
AP003900.1-202ENST00000616952 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
AP003900.1-202ENST00000616952 IFT140Q96RY7 1462 aa21■□□□□ 0.95
AP003900.1-202ENST00000616952 CHD1O14646 1710 aa20.96■□□□□ 0.95
AP003900.1-202ENST00000616952 CFTRP13569 1480 aa20.94■□□□□ 0.94
AP003900.1-202ENST00000616952 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
AP003900.1-202ENST00000616952 FBLN2P98095 1184 aa20.79■□□□□ 0.92
AP003900.1-202ENST00000616952 PPP4R3CPQ6ZMV5 832 aa20.77■□□□□ 0.92
AP003900.1-202ENST00000616952 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
AP003900.1-202ENST00000616952 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.9
AP003900.1-202ENST00000616952 WIZO95785 1651 aa20.69■□□□□ 0.9
AP003900.1-202ENST00000616952 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
AP003900.1-202ENST00000616952 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
AP003900.1-202ENST00000616952 KDM4FA0A1W2PPD8 638 aa20.61■□□□□ 0.89
AP003900.1-202ENST00000616952 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
AP003900.1-202ENST00000616952 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
AP003900.1-202ENST00000616952 PRDM2Q13029 1718 aa20.58■□□□□ 0.88
AP003900.1-202ENST00000616952 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
AP003900.1-202ENST00000616952 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
AP003900.1-202ENST00000616952 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
AP003900.1-202ENST00000616952 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
AP003900.1-202ENST00000616952 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
AP003900.1-202ENST00000616952 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
AP003900.1-202ENST00000616952 CNKSR2Q8WXI2 1034 aa20.4■□□□□ 0.86
AP003900.1-202ENST00000616952 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
AP003900.1-202ENST00000616952 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
AP003900.1-202ENST00000616952 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
AP003900.1-202ENST00000616952 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
AP003900.1-202ENST00000616952 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
AP003900.1-202ENST00000616952 SYNJ2O15056 1496 aa20.33■□□□□ 0.85
AP003900.1-202ENST00000616952 FBXO41Q8TF61 875 aa20.33■□□□□ 0.85
AP003900.1-202ENST00000616952 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
AP003900.1-202ENST00000616952 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
AP003900.1-202ENST00000616952 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
AP003900.1-202ENST00000616952 KDM6BO15054 1643 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms