RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-208ENST00000616449 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
ACSS3-208ENST00000616449 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
ACSS3-208ENST00000616449 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
ACSS3-208ENST00000616449 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
ACSS3-208ENST00000616449 KIF21BO75037 1637 aa17.8■□□□□ 0.44
ACSS3-208ENST00000616449 FOXD1Q16676 465 aa17.8■□□□□ 0.44
ACSS3-208ENST00000616449 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
ACSS3-208ENST00000616449 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.44
ACSS3-208ENST00000616449 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
ACSS3-208ENST00000616449 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
ACSS3-208ENST00000616449 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
ACSS3-208ENST00000616449 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.42
ACSS3-208ENST00000616449 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
ACSS3-208ENST00000616449 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
ACSS3-208ENST00000616449 MYT1Q01538 1121 aa17.69■□□□□ 0.42
ACSS3-208ENST00000616449 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
ACSS3-208ENST00000616449 IGF1RP08069 1367 aa17.67■□□□□ 0.42
ACSS3-208ENST00000616449 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
ACSS3-208ENST00000616449 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
ACSS3-208ENST00000616449 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
ACSS3-208ENST00000616449 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
ACSS3-208ENST00000616449 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
ACSS3-208ENST00000616449 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
ACSS3-208ENST00000616449 EIF4G2P78344 907 aaKnown RBP eCLIP17.59■□□□□ 0.41
ACSS3-208ENST00000616449 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
ACSS3-208ENST00000616449 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.41
ACSS3-208ENST00000616449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.41
ACSS3-208ENST00000616449 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.4
ACSS3-208ENST00000616449 CUX1P39880 1505 aa17.57■□□□□ 0.4
ACSS3-208ENST00000616449 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
ACSS3-208ENST00000616449 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
ACSS3-208ENST00000616449 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
ACSS3-208ENST00000616449 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
ACSS3-208ENST00000616449 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
ACSS3-208ENST00000616449 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
ACSS3-208ENST00000616449 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
ACSS3-208ENST00000616449 TSHZ2Q9NRE2 1034 aa17.51■□□□□ 0.39
ACSS3-208ENST00000616449 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
ACSS3-208ENST00000616449 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
ACSS3-208ENST00000616449 NESP48681 1621 aa17.47■□□□□ 0.39
ACSS3-208ENST00000616449 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
ACSS3-208ENST00000616449 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
ACSS3-208ENST00000616449 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
ACSS3-208ENST00000616449 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
ACSS3-208ENST00000616449 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
ACSS3-208ENST00000616449 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
ACSS3-208ENST00000616449 CFTRP13569 1480 aa17.42■□□□□ 0.38
ACSS3-208ENST00000616449 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
ACSS3-208ENST00000616449 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
ACSS3-208ENST00000616449 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
ACSS3-208ENST00000616449 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
ACSS3-208ENST00000616449 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
ACSS3-208ENST00000616449 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
ACSS3-208ENST00000616449 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
ACSS3-208ENST00000616449 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
ACSS3-208ENST00000616449 FMN1Q68DA7 1419 aa17.35■□□□□ 0.37
ACSS3-208ENST00000616449 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
ACSS3-208ENST00000616449 NBR1Q14596 966 aa17.35■□□□□ 0.37
ACSS3-208ENST00000616449 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
ACSS3-208ENST00000616449 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
ACSS3-208ENST00000616449 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
ACSS3-208ENST00000616449 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
ACSS3-208ENST00000616449 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
ACSS3-208ENST00000616449 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
ACSS3-208ENST00000616449 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
ACSS3-208ENST00000616449 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
ACSS3-208ENST00000616449 PKD2Q13563 968 aa17.31■□□□□ 0.36
ACSS3-208ENST00000616449 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
ACSS3-208ENST00000616449 FGD6Q6ZV73 1430 aa17.28■□□□□ 0.36
ACSS3-208ENST00000616449 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
ACSS3-208ENST00000616449 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
ACSS3-208ENST00000616449 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
ACSS3-208ENST00000616449 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
ACSS3-208ENST00000616449 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
ACSS3-208ENST00000616449 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
ACSS3-208ENST00000616449 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
ACSS3-208ENST00000616449 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
ACSS3-208ENST00000616449 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
ACSS3-208ENST00000616449 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
ACSS3-208ENST00000616449 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
ACSS3-208ENST00000616449 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
ACSS3-208ENST00000616449 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
ACSS3-208ENST00000616449 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACSS3-208ENST00000616449 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
ACSS3-208ENST00000616449 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
ACSS3-208ENST00000616449 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
ACSS3-208ENST00000616449 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
ACSS3-208ENST00000616449 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
ACSS3-208ENST00000616449 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
ACSS3-208ENST00000616449 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
ACSS3-208ENST00000616449 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
ACSS3-208ENST00000616449 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
ACSS3-208ENST00000616449 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
ACSS3-208ENST00000616449 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
ACSS3-208ENST00000616449 NUP155O75694 1391 aa17.14■□□□□ 0.33
ACSS3-208ENST00000616449 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
ACSS3-208ENST00000616449 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
ACSS3-208ENST00000616449 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
ACSS3-208ENST00000616449 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
ACSS3-208ENST00000616449 JPH4Q96JJ6 628 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms