RNA–Protein interactions for RNA: ENST00000614239.1

LHX1-201, Transcript of LIM homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX1, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-201ENST00000614239 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
LHX1-201ENST00000614239 FANCIQ9NVI1 1328 aa19.66■□□□□ 0.74
LHX1-201ENST00000614239 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.74
LHX1-201ENST00000614239 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
LHX1-201ENST00000614239 UBE2Q2Q8WVN8 375 aa19.63■□□□□ 0.73
LHX1-201ENST00000614239 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.73
LHX1-201ENST00000614239 ERICH6BQ5W0A0 696 aa19.58■□□□□ 0.73
LHX1-201ENST00000614239 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
LHX1-201ENST00000614239 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
LHX1-201ENST00000614239 CFTRP13569 1480 aa19.56■□□□□ 0.72
LHX1-201ENST00000614239 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
LHX1-201ENST00000614239 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
LHX1-201ENST00000614239 B4GALNT3Q6L9W6 998 aa19.53■□□□□ 0.72
LHX1-201ENST00000614239 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
LHX1-201ENST00000614239 EEA1Q15075 1411 aa19.52■□□□□ 0.72
LHX1-201ENST00000614239 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
LHX1-201ENST00000614239 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
LHX1-201ENST00000614239 ANP32CO43423 234 aa19.5■□□□□ 0.71
LHX1-201ENST00000614239 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
LHX1-201ENST00000614239 PKNOX2Q96KN3 472 aa19.49■□□□□ 0.71
LHX1-201ENST00000614239 ZBTB47Q9UFB7 747 aaPredicted RBP19.48■□□□□ 0.71
LHX1-201ENST00000614239 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
LHX1-201ENST00000614239 CUX1P39880 1505 aa19.45■□□□□ 0.7
LHX1-201ENST00000614239 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
LHX1-201ENST00000614239 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
LHX1-201ENST00000614239 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
LHX1-201ENST00000614239 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
LHX1-201ENST00000614239 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
LHX1-201ENST00000614239 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
LHX1-201ENST00000614239 NEFMP07197 916 aa19.37■□□□□ 0.69
LHX1-201ENST00000614239 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
LHX1-201ENST00000614239 SIN3AQ96ST3 1273 aa19.34■□□□□ 0.69
LHX1-201ENST00000614239 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
LHX1-201ENST00000614239 NESP48681 1621 aa19.32■□□□□ 0.68
LHX1-201ENST00000614239 KIF21BO75037 1637 aa19.3■□□□□ 0.68
LHX1-201ENST00000614239 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
LHX1-201ENST00000614239 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
LHX1-201ENST00000614239 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
LHX1-201ENST00000614239 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
LHX1-201ENST00000614239 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
LHX1-201ENST00000614239 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
LHX1-201ENST00000614239 GLIPR1L2Q4G1C9 344 aa19.21■□□□□ 0.66
LHX1-201ENST00000614239 DHX57Q6P158 1386 aaKnown RBP19.2■□□□□ 0.66
LHX1-201ENST00000614239 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
LHX1-201ENST00000614239 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
LHX1-201ENST00000614239 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
LHX1-201ENST00000614239 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
LHX1-201ENST00000614239 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
LHX1-201ENST00000614239 CUX2O14529 1486 aa19.15■□□□□ 0.66
LHX1-201ENST00000614239 ARAP1Q96P48 1450 aa19.14■□□□□ 0.66
LHX1-201ENST00000614239 ARXQ96QS3 562 aa19.13■□□□□ 0.65
LHX1-201ENST00000614239 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
LHX1-201ENST00000614239 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
LHX1-201ENST00000614239 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
LHX1-201ENST00000614239 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
LHX1-201ENST00000614239 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
LHX1-201ENST00000614239 IGF1RP08069 1367 aa19.08■□□□□ 0.64
LHX1-201ENST00000614239 TOPBP1Q92547 1522 aa19.08■□□□□ 0.64
LHX1-201ENST00000614239 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
LHX1-201ENST00000614239 RAB3GAP2Q9H2M9 1393 aa19.07■□□□□ 0.64
LHX1-201ENST00000614239 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
LHX1-201ENST00000614239 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
LHX1-201ENST00000614239 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
LHX1-201ENST00000614239 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
LHX1-201ENST00000614239 ARID4BQ4LE39 1312 aaPredicted RBP19.04■□□□□ 0.64
LHX1-201ENST00000614239 ZMYND15Q9H091 742 aa19.03■□□□□ 0.64
LHX1-201ENST00000614239 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
LHX1-201ENST00000614239 A0A0U1RQG5 324 aaPredicted RBP19.03■□□□□ 0.64
LHX1-201ENST00000614239 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
LHX1-201ENST00000614239 RRP7BPQ9NSQ0 103 aa19■□□□□ 0.63
LHX1-201ENST00000614239 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
LHX1-201ENST00000614239 PPP1R15AO75807 674 aaPredicted RBP18.97■□□□□ 0.63
LHX1-201ENST00000614239 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
LHX1-201ENST00000614239 NAP1L5Q96NT1 182 aaPredicted RBP18.96■□□□□ 0.63
LHX1-201ENST00000614239 GSE1Q14687 1217 aa18.95■□□□□ 0.62
LHX1-201ENST00000614239 RSPH6AQ9H0K4 717 aa18.95■□□□□ 0.62
LHX1-201ENST00000614239 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
LHX1-201ENST00000614239 SLC4A3P48751 1232 aa18.95■□□□□ 0.62
LHX1-201ENST00000614239 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
LHX1-201ENST00000614239 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
LHX1-201ENST00000614239 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
LHX1-201ENST00000614239 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
LHX1-201ENST00000614239 MRS2Q9HD23 443 aa18.91■□□□□ 0.62
LHX1-201ENST00000614239 FRAT1Q92837 279 aaPredicted RBP18.91■□□□□ 0.62
LHX1-201ENST00000614239 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
LHX1-201ENST00000614239 FOXD1Q16676 465 aa18.9■□□□□ 0.62
LHX1-201ENST00000614239 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
LHX1-201ENST00000614239 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
LHX1-201ENST00000614239 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
LHX1-201ENST00000614239 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
LHX1-201ENST00000614239 FBLN2P98095 1184 aa18.83■□□□□ 0.61
LHX1-201ENST00000614239 HSP90AA2PQ14568 343 aaPredicted RBP18.83■□□□□ 0.6
LHX1-201ENST00000614239 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
LHX1-201ENST00000614239 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
LHX1-201ENST00000614239 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
LHX1-201ENST00000614239 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
LHX1-201ENST00000614239 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
LHX1-201ENST00000614239 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
LHX1-201ENST00000614239 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
LHX1-201ENST00000614239 C11orf95C9JLR9 678 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms