RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 PLPPR3Q6T4P5 718 aa12.15□□□□□ -0.46
PCDH15-224ENST00000612394 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
PCDH15-224ENST00000612394 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
PCDH15-224ENST00000612394 FHAD1B1AJZ9 1412 aa12.14□□□□□ -0.47
PCDH15-224ENST00000612394 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
PCDH15-224ENST00000612394 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
PCDH15-224ENST00000612394 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
PCDH15-224ENST00000612394 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
PCDH15-224ENST00000612394 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
PCDH15-224ENST00000612394 FKBP8Q14318 412 aa12.11□□□□□ -0.47
PCDH15-224ENST00000612394 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
PCDH15-224ENST00000612394 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
PCDH15-224ENST00000612394 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
PCDH15-224ENST00000612394 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
PCDH15-224ENST00000612394 NPM2Q86SE8 214 aaKnown RBP12.08□□□□□ -0.48
PCDH15-224ENST00000612394 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
PCDH15-224ENST00000612394 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
PCDH15-224ENST00000612394 KANK1Q14678 1352 aa12.05□□□□□ -0.48
PCDH15-224ENST00000612394 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
PCDH15-224ENST00000612394 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
PCDH15-224ENST00000612394 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
PCDH15-224ENST00000612394 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
PCDH15-224ENST00000612394 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
PCDH15-224ENST00000612394 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
PCDH15-224ENST00000612394 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
PCDH15-224ENST00000612394 CUX2O14529 1486 aa12.01□□□□□ -0.49
PCDH15-224ENST00000612394 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
PCDH15-224ENST00000612394 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
PCDH15-224ENST00000612394 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
PCDH15-224ENST00000612394 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
PCDH15-224ENST00000612394 CARD11Q9BXL7 1154 aa11.98□□□□□ -0.49
PCDH15-224ENST00000612394 PNNQ9H307 717 aaKnown RBP11.97□□□□□ -0.49
PCDH15-224ENST00000612394 TIMELESSQ9UNS1 1208 aa11.97□□□□□ -0.49
PCDH15-224ENST00000612394 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
PCDH15-224ENST00000612394 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
PCDH15-224ENST00000612394 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.5
PCDH15-224ENST00000612394 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
PCDH15-224ENST00000612394 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
PCDH15-224ENST00000612394 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
PCDH15-224ENST00000612394 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
PCDH15-224ENST00000612394 BECN1Q14457 450 aa11.94□□□□□ -0.5
PCDH15-224ENST00000612394 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
PCDH15-224ENST00000612394 POGKQ9P215 609 aa11.93□□□□□ -0.5
PCDH15-224ENST00000612394 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
PCDH15-224ENST00000612394 CASC1Q6TDU7 716 aa11.93□□□□□ -0.5
PCDH15-224ENST00000612394 ANP32EQ9BTT0 268 aa11.92□□□□□ -0.5
PCDH15-224ENST00000612394 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
PCDH15-224ENST00000612394 MS4A1P11836 297 aa11.92□□□□□ -0.5
PCDH15-224ENST00000612394 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
PCDH15-224ENST00000612394 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
PCDH15-224ENST00000612394 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
PCDH15-224ENST00000612394 TMF1P82094 1093 aa11.88□□□□□ -0.51
PCDH15-224ENST00000612394 A0A0G2JS52 829 aa11.88□□□□□ -0.51
PCDH15-224ENST00000612394 SOGA1O94964 1423 aa11.88□□□□□ -0.51
PCDH15-224ENST00000612394 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
PCDH15-224ENST00000612394 MIER1Q8N108 512 aa11.87□□□□□ -0.51
PCDH15-224ENST00000612394 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
PCDH15-224ENST00000612394 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
PCDH15-224ENST00000612394 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
PCDH15-224ENST00000612394 CDK11BP21127 795 aaKnown RBP11.86□□□□□ -0.51
PCDH15-224ENST00000612394 SETD5Q9C0A6 1442 aa11.85□□□□□ -0.51
PCDH15-224ENST00000612394 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
PCDH15-224ENST00000612394 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
PCDH15-224ENST00000612394 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
PCDH15-224ENST00000612394 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
PCDH15-224ENST00000612394 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
PCDH15-224ENST00000612394 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
PCDH15-224ENST00000612394 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
PCDH15-224ENST00000612394 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
PCDH15-224ENST00000612394 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
PCDH15-224ENST00000612394 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
PCDH15-224ENST00000612394 DCAF11Q8TEB1 546 aa11.78□□□□□ -0.52
PCDH15-224ENST00000612394 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.53
PCDH15-224ENST00000612394 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
PCDH15-224ENST00000612394 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
PCDH15-224ENST00000612394 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
PCDH15-224ENST00000612394 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
PCDH15-224ENST00000612394 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
PCDH15-224ENST00000612394 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 LAS1LQ9Y4W2 734 aaKnown RBP11.74□□□□□ -0.53
PCDH15-224ENST00000612394 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
PCDH15-224ENST00000612394 GLIPR1L2Q4G1C9 344 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
PCDH15-224ENST00000612394 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
PCDH15-224ENST00000612394 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
PCDH15-224ENST00000612394 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
PCDH15-224ENST00000612394 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
PCDH15-224ENST00000612394 ARXQ96QS3 562 aa11.73□□□□□ -0.53
PCDH15-224ENST00000612394 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
PCDH15-224ENST00000612394 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
PCDH15-224ENST00000612394 U2SURPO15042 1029 aaKnown RBP11.72□□□□□ -0.53
PCDH15-224ENST00000612394 WIZO95785 1651 aa11.71□□□□□ -0.53
PCDH15-224ENST00000612394 PKD2Q13563 968 aa11.71□□□□□ -0.53
PCDH15-224ENST00000612394 ATAD2BQ9ULI0 1458 aa11.71□□□□□ -0.54
PCDH15-224ENST00000612394 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.54
PCDH15-224ENST00000612394 NPHP1O15259 732 aa11.71□□□□□ -0.54
PCDH15-224ENST00000612394 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms